Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.10g025260 Amaranthus hybridus HOM05D001385 ORTHO05D008760 3.2e-275 951.4 594 100.0
Ah.05g177810 Amaranthus hybridus HOM05D001385 ORTHO05D002073 5.0e-260 901.0 664 87.8
Ah.05g175550 Amaranthus hybridus HOM05D001385 ORTHO05D008760 3.7e-223 778.5 642 79.9
Ah.08g221340 Amaranthus hybridus HOM05D001385 ORTHO05D008760 1.6e-210 736.5 594 75.6
Ah.01g010370 Amaranthus hybridus HOM05D001385 ORTHO05D008760 8.0e-125 451.8 357 71.4
Ah.02g123480 Amaranthus hybridus HOM05D001385 ORTHO05D008760 6.8e-92 342.4 661 37.2
Ah.02g120890 Amaranthus hybridus HOM05D001385 ORTHO05D008760 7.3e-78 295.8 433 53.1
Ah.02g117910 Amaranthus hybridus HOM05D001385 ORTHO05D008760 2.4e-76 290.8 606 36.8
Ah.10g025350 Amaranthus hybridus HOM05D001385 ORTHO05D008760 3.4e-67 260.4 440 39.8
AUR62040137 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.7e-50 204.9 379 36.4
AUR62043334 Chenopodium quinoa HOM05D001385 ORTHO05D008760 3.8e-50 203.8 379 38.0
AUR62042768 Chenopodium quinoa HOM05D001385 ORTHO05D008760 2.5e-49 201.1 374 37.4
AUR62043185 Chenopodium quinoa HOM05D001385 ORTHO05D008760 2.5e-49 201.1 374 37.4
Ah.10g025640 Amaranthus hybridus HOM05D001385 ORTHO05D008760 8.7e-47 192.6 225 64.4
Ah.02g117400 Amaranthus hybridus HOM05D001385 ORTHO05D008760 1.1e-46 192.2 317 40.7
Ah.13g066910 Amaranthus hybridus HOM05D001385 ORTHO05D008760 4.5e-43 180.3 576 30.4
Ah.02g120900 Amaranthus hybridus HOM05D001385 ORTHO05D008760 1.7e-42 178.3 95 95.8
AUR62041069 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.4e-41 175.3 281 37.7
EL10Ac7g18151 Beta vulgaris HOM05D001385 ORTHO05D008760 1.0e-39 169.1 418 29.2
EL10Ac6g14499 Beta vulgaris HOM05D001385 ORTHO05D008760 8.8e-39 166.0 439 28.9
EL10Ac1g02060 Beta vulgaris HOM05D001385 ORTHO05D008760 1.9e-38 164.9 363 31.1
Ah.07g199140 Amaranthus hybridus HOM05D001385 ORTHO05D008760 7.4e-38 162.9 206 47.6
EL10Ac7g16607 Beta vulgaris HOM05D001385 ORTHO05D008760 1.3e-37 162.2 359 30.6
AUR62036601 Chenopodium quinoa HOM05D001385 ORTHO05D008760 9.1e-36 156.0 336 33.6
AUR62039827 Chenopodium quinoa HOM05D000107 ORTHO05D000062 4.5e-35 153.7 294 35.0
AUR62037120 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.2e-32 145.6 202 45.5
AUR62041104 Chenopodium quinoa HOM05D001385 ORTHO05D008760 2.7e-32 144.4 360 30.3
AUR62036605 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.0e-31 142.5 199 44.7
EL10Ac9g20910 Beta vulgaris HOM05D001385 ORTHO05D008760 3.0e-31 141.0 355 29.0
EL10Ac5g11862 Beta vulgaris HOM05D001385 ORTHO05D008760 8.8e-31 139.4 417 26.1
EL10Ac2g03907 Beta vulgaris HOM05D001385 ORTHO05D008760 1.5e-30 138.7 379 28.5
EL10Ac6g14099 Beta vulgaris HOM05D001385 ORTHO05D008760 2.0e-30 138.3 345 29.3
EL10Ac8g19807 Beta vulgaris HOM05D001385 ORTHO05D008760 2.0e-30 138.3 379 28.5
EL10Ac9g21092 Beta vulgaris HOM05D001385 ORTHO05D008760 2.0e-30 138.3 379 28.5
EL10Ac4g08894 Beta vulgaris HOM05D001385 ORTHO05D008760 2.6e-30 137.9 379 28.5
EL10Ac1g01131 Beta vulgaris HOM05D001385 ORTHO05D008760 4.4e-30 137.1 345 29.0
AUR62039729 Chenopodium quinoa HOM05D001385 ORTHO05D008760 5.7e-30 136.7 306 28.8
EL10Ac4g09023 Beta vulgaris HOM05D001385 ORTHO05D008760 2.2e-29 134.8 379 28.0
EL10Ac1g01824 Beta vulgaris HOM05D001385 ORTHO05D008760 3.7e-29 134.0 329 29.5
AUR62034140 Chenopodium quinoa HOM05D001385 ORTHO05D008760 8.2e-29 132.9 454 24.9
AUR62030226 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.1e-28 132.5 300 32.7
EL10Ac1g02023 Beta vulgaris HOM05D001385 ORTHO05D008760 1.4e-28 132.1 338 28.7
EL10Ac1g01188 Beta vulgaris HOM05D001385 ORTHO05D008760 3.1e-28 131.0 379 27.7
AUR62040146 Chenopodium quinoa HOM05D001385 ORTHO05D008760 3.1e-28 131.0 421 25.4
Ah.02g120850 Amaranthus hybridus HOM05D001385 ORTHO05D008760 4.1e-28 130.6 80 72.5
AUR62037924 Chenopodium quinoa HOM05D001385 ORTHO05D008760 9.1e-28 129.4 294 33.3
EL10Ac5g11714 Beta vulgaris HOM05D000107 ORTHO05D000062 1.2e-27 129.0 397 27.2
Hund06374 Selenicereus undatus HOM05D001385 ORTHO05D004434 1.2e-27 129.0 299 32.8
AUR62013317 Chenopodium quinoa HOM05D004522 ORTHO05D008760 2.0e-27 128.3 170 45.3
Ah.02g121100 Amaranthus hybridus HOM05D001385 ORTHO05D008760 4.5e-27 127.1 212 45.8
AUR62043841 Chenopodium quinoa HOM05D001385 ORTHO05D008760 4.5e-27 127.1 264 30.3
EL10Ac3g06415 Beta vulgaris HOM05D001385 ORTHO05D008760 2.9e-26 124.4 344 25.9
Hund06375 Selenicereus undatus HOM05D001385 ORTHO05D004434 1.9e-25 121.7 280 33.9
AUR62026509 Chenopodium quinoa HOM05D001385 ORTHO05D008760 4.2e-25 120.6 401 24.2
Ah.06g185530 Amaranthus hybridus HOM05D001385 ORTHO05D008760 1.6e-24 118.6 205 55.1
AUR62028251 Chenopodium quinoa HOM05D001385 ORTHO05D008760 4.7e-24 117.1 276 30.1
AUR62002718 Chenopodium quinoa HOM05D001385 ORTHO05D008760 6.1e-24 116.7 308 29.2
AUR62010149 Chenopodium quinoa HOM05D001385 ORTHO05D004434 1.0e-23 115.9 346 28.0
AUR62013145 Chenopodium quinoa HOM05D001385 ORTHO05D000378 8.8e-23 112.8 350 29.4
AUR62037359 Chenopodium quinoa HOM05D001385 ORTHO05D008760 8.8e-23 112.8 193 34.7
AUR62040186 Chenopodium quinoa HOM05D001385 ORTHO05D004434 1.3e-21 109.0 215 33.0
AUR62042068 Chenopodium quinoa HOM05D001385 ORTHO05D008760 8.2e-21 106.3 201 32.8
AUR62034766 Chenopodium quinoa HOM05D001385 ORTHO05D008760 3.1e-20 104.4 112 46.4
AUR62042851 Chenopodium quinoa HOM05D001385 ORTHO05D008760 7.0e-20 103.2 144 40.3
AUR62013950 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.2e-19 102.4 279 25.8
Sc13g0007340 Simmondsia chinensis HOM05D001385 ORTHO05D004434 2.6e-19 101.3 264 28.8
AUR62014303 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.0e-18 99.4 139 41.7
AUR62042540 Chenopodium quinoa HOM05D001385 ORTHO05D008760 5.0e-18 97.1 223 32.3
AUR62034205 Chenopodium quinoa HOM05D001385 ORTHO05D008760 6.5e-18 96.7 369 25.5
AUR62028470 Chenopodium quinoa HOM05D001385 ORTHO05D008760 8.5e-18 96.3 371 26.7
Hund07770 Selenicereus undatus HOM05D000185 ORTHO05D000105 8.5e-18 96.3 331 28.1
AUR62013585 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.9e-17 95.1 334 24.6
EL10Ac9g21493 Beta vulgaris HOM05D001385 ORTHO05D004434 5.5e-17 93.6 327 27.8
Sc10g0006250 Simmondsia chinensis HOM05D001385 ORTHO05D008760 7.2e-17 93.2 201 31.3
Hund26514 Selenicereus undatus HOM05D009900 ORTHO05D011543 9.4e-17 92.8 214 32.2
EL10Ac7g17195 Beta vulgaris HOM05D000107 ORTHO05D000062 1.2e-16 92.4 335 24.5
EL10Ac8g20048 Beta vulgaris HOM05D000107 ORTHO05D000062 1.6e-16 92.0 151 33.1
EL10Ac4g08961 Beta vulgaris HOM05D000107 ORTHO05D000062 2.7e-16 91.3 151 32.5
EL10Ac3g06245 Beta vulgaris HOM05D001385 ORTHO05D008760 3.6e-16 90.9 151 32.5
AUR62016349 Chenopodium quinoa HOM05D001385 ORTHO05D008760 6.1e-16 90.1 280 26.8
EL10Ac4g08959 Beta vulgaris HOM05D001385 ORTHO05D008760 1.4e-15 89.0 204 28.9
AUR62038951 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.5e-14 85.5 148 34.5
AUR62042649 Chenopodium quinoa HOM05D001385 ORTHO05D000062 1.5e-14 85.5 349 28.4
EL10Ac4g08867 Beta vulgaris HOM05D001385 ORTHO05D008760 2.0e-14 85.1 248 23.8
EL10Ac8g19533 Beta vulgaris HOM05D001385 ORTHO05D008760 3.3e-14 84.3 234 26.5
AUR62005475 Chenopodium quinoa HOM05D001385 ORTHO05D004434 3.3e-14 84.3 122 39.3
EL10Ac5g12063 Beta vulgaris HOM05D000107 ORTHO05D000062 7.5e-14 83.2 157 30.6
AUR62041907 Chenopodium quinoa HOM05D001385 ORTHO05D008760 9.7e-14 82.8 271 25.1
AUR62029692 Chenopodium quinoa HOM05D001385 ORTHO05D008760 2.8e-13 81.3 143 31.5
Hund23564 Selenicereus undatus HOM05D004066 ORTHO05D004434 6.3e-13 80.1 162 34.6
Hund00070 Selenicereus undatus HOM05D001385 ORTHO05D004434 8.2e-13 79.7 315 24.4
AUR62019603 Chenopodium quinoa HOM05D001385 ORTHO05D008760 3.1e-12 77.8 211 28.0
AUR62020405 Chenopodium quinoa HOM05D001385 ORTHO05D008760 4.1e-12 77.4 177 29.9
AUR62042499 Chenopodium quinoa HOM05D001385 ORTHO05D008760 4.1e-12 77.4 217 26.3
COL.COLO4_17726 Corchorus olitorius HOM05D001309 ORTHO05D005970 1.2e-11 75.9 248 26.2
Hund01689 Selenicereus undatus HOM05D009609 ORTHO05D011572 1.6e-11 75.5 164 33.5
Hund08112 Selenicereus undatus HOM05D009609 ORTHO05D011572 2.7e-11 74.7 157 34.4
Ah.01g010380 Amaranthus hybridus HOM05D001385 ORTHO05D008760 4.5e-11 73.9 104 50.0
Hund19989 Selenicereus undatus HOM05D041637 ORTHO05D030589 1.0e-10 72.8 172 32.6
AUR62006161 Chenopodium quinoa HOM05D039261 ORTHO05D008760 1.7e-10 72.0 143 33.6
Hund27434 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.7e-10 72.0 300 26.0
EL10Ac8g19748 Beta vulgaris HOM05D001385 ORTHO05D008760 2.2e-10 71.6 171 26.9
AUR62003191 Chenopodium quinoa HOM05D000002 ORTHO05D000001 2.2e-10 71.6 98 41.8
EL10Ac2g03369 Beta vulgaris HOM05D000107 ORTHO05D000062 3.8e-10 70.9 81 37.0
Hund20142 Selenicereus undatus HOM05D001385 ORTHO05D008760 3.8e-10 70.9 158 32.3
AUR62035309 Chenopodium quinoa HOM05D001385 ORTHO05D008760 5.0e-10 70.5 188 28.7
EL10Ac9g20863 Beta vulgaris HOM05D001385 ORTHO05D008760 8.5e-10 69.7 107 31.8
Sc11g0008180 Simmondsia chinensis HOM05D001385 ORTHO05D008760 1.1e-09 69.3 125 33.6
AUR62044135 Chenopodium quinoa HOM05D001385 ORTHO05D008760 2.5e-09 68.2 348 21.8
Hund14851 Selenicereus undatus HOM05D009900 ORTHO05D011543 3.2e-09 67.8 195 27.2
Sc08g0003950 Simmondsia chinensis HOM05D001385 ORTHO05D008760 3.2e-09 67.8 128 32.8
AUR62037756 Chenopodium quinoa HOM05D001385 ORTHO05D008760 4.2e-09 67.4 127 37.8
Hund01077 Selenicereus undatus HOM05D004066 ORTHO05D004434 5.5e-09 67.0 312 25.3
Hund18060 Selenicereus undatus HOM05D009609 ORTHO05D011572 5.5e-09 67.0 157 31.8
Hund03850 Selenicereus undatus HOM05D004066 ORTHO05D004434 9.4e-09 66.2 351 25.4
COL.COLO4_21802 Corchorus olitorius HOM05D001309 ORTHO05D000385 1.2e-08 65.9 238 27.3
Hund04136 Selenicereus undatus HOM05D009900 ORTHO05D011543 2.1e-08 65.1 196 27.6
Hund24775 Selenicereus undatus HOM05D009900 ORTHO05D011543 2.1e-08 65.1 196 28.1
AUR62034385 Chenopodium quinoa HOM05D001385 ORTHO05D008760 3.6e-08 64.3 113 30.1
Sc08g0005020 Simmondsia chinensis HOM05D004066 ORTHO05D004434 4.7e-08 63.9 93 34.4
TWI60G1041 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 4.7e-08 63.9 199 26.1
Ca_04520_v3 Cicer arietinum L. HOM05D001309 ORTHO05D000385 8.0e-08 63.2 215 29.3
Hund28976 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.4e-07 62.4 305 24.6
Hund28977 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.4e-07 62.4 305 24.6
Hund29980 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.4e-07 62.4 305 24.6
Hund08825 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.8e-07 62.0 195 27.7
Sc11g0008190 Simmondsia chinensis HOM05D001385 ORTHO05D004434 3.0e-07 61.2 72 41.7
AUR62027999 Chenopodium quinoa HOM05D001385 ORTHO05D008760 4.0e-07 60.8 92 34.8
AUR62041185 Chenopodium quinoa HOM05D001385 ORTHO05D008760 5.2e-07 60.5 123 29.3
EL10Ac6g14698 Beta vulgaris HOM05D001385 ORTHO05D000062 8.8e-07 59.7 72 40.3
Hund01500 Selenicereus undatus HOM05D004066 ORTHO05D004434 8.8e-07 59.7 373 24.1
Hund04453 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.2e-06 59.3 293 26.3
Hund02732 Selenicereus undatus HOM05D009900 ORTHO05D011543 2.6e-06 58.2 224 25.0
Hund04034 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.6e-06 58.2 333 22.8
Hund12908 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.6e-06 58.2 384 22.9
Hund13844 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.6e-06 58.2 333 23.4
Hund15061 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.6e-06 58.2 376 23.1
COL.COLO4_15867 Corchorus olitorius HOM05D001309 ORTHO05D004434 3.4e-06 57.8 257 25.3
Hund11364 Selenicereus undatus HOM05D004066 ORTHO05D004434 4.4e-06 57.4 384 23.2
AUR62002875 Chenopodium quinoa HOM05D001385 ORTHO05D008760 7.5e-06 56.6 158 23.4
AUR62043798 Chenopodium quinoa HOM05D001385 ORTHO05D008760 7.5e-06 56.6 92 33.7
Hund11417 Selenicereus undatus HOM05D004066 ORTHO05D004434 9.8e-06 56.2 102 34.3


User provided reference genes

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