Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.10g024960 Amaranthus hybridus HOM05D009516 ORTHO05D000062 3.2e-68 261.5 124 100.0
Ah.03g142580 Amaranthus hybridus HOM05D000003 ORTHO05D000004 1.0e-58 229.9 119 91.6
Ah.03g145030 Amaranthus hybridus HOM05D000107 ORTHO05D000568 2.4e-47 192.2 124 73.4
Ah.15g097390 Amaranthus hybridus HOM05D000107 ORTHO05D000062 4.2e-36 154.8 124 58.9
Ah.05g172280 Amaranthus hybridus HOM05D000107 ORTHO05D003213 1.2e-35 153.3 124 57.3
Ah.14g079910 Amaranthus hybridus HOM05D000107 ORTHO05D003213 7.0e-23 110.9 97 54.6
AUR62002886 Chenopodium quinoa HOM05D000107 ORTHO05D010932 4.2e-20 101.7 128 42.2
AUR62038710 Chenopodium quinoa HOM05D000107 ORTHO05D000062 7.2e-20 100.9 128 41.4
AUR62040135 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.1e-19 99.4 128 41.4
AUR62016577 Chenopodium quinoa HOM05D000107 ORTHO05D010932 4.7e-19 98.2 128 44.5
Ah.10g030440 Amaranthus hybridus HOM05D000107 ORTHO05D000062 6.1e-19 97.8 59 74.6
AUR62007687 Chenopodium quinoa HOM05D000107 ORTHO05D010932 6.1e-19 97.8 128 44.5
AUR62029573 Chenopodium quinoa HOM05D000107 ORTHO05D010932 6.1e-19 97.8 128 44.5
AUR62041360 Chenopodium quinoa HOM05D000107 ORTHO05D000062 6.1e-19 97.8 128 44.5
AUR62042481 Chenopodium quinoa HOM05D000107 ORTHO05D000062 6.1e-19 97.8 128 44.5
AUR62042483 Chenopodium quinoa HOM05D000107 ORTHO05D010932 2.0e-17 92.8 131 43.5
AUR62041941 Chenopodium quinoa HOM05D000107 ORTHO05D010932 2.6e-17 92.4 128 43.0
Ah.08g220140 Amaranthus hybridus HOM05D000107 ORTHO05D003213 9.8e-17 90.5 66 59.1
AUR62036819 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.3e-16 90.1 107 45.8
AUR62042987 Chenopodium quinoa HOM05D000107 ORTHO05D000062 6.3e-16 87.8 130 41.5
AUR62041237 Chenopodium quinoa HOM05D009516 ORTHO05D010476 1.6e-14 83.2 130 42.3
AUR62021541 Chenopodium quinoa HOM05D009516 ORTHO05D010476 3.5e-14 82.0 130 41.5
AUR62022208 Chenopodium quinoa HOM05D009516 ORTHO05D010476 3.5e-14 82.0 130 42.3
AUR62026517 Chenopodium quinoa HOM05D009516 ORTHO05D010476 3.5e-14 82.0 130 40.0
AUR62034757 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.7e-13 79.7 119 42.0
AUR62002722 Chenopodium quinoa HOM05D009516 ORTHO05D010476 8.5e-13 77.4 125 40.8
AUR62042735 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.1e-12 77.0 125 41.6
AUR62031294 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.6e-11 73.2 78 50.0
Hund15268 Selenicereus undatus HOM05D009516 ORTHO05D000062 8.0e-11 70.9 96 40.6
Ah.14g078660 Amaranthus hybridus HOM05D000107 ORTHO05D000568 6.8e-10 67.8 47 63.8
PGR102G0480 Punica granatum HOM05D000107 ORTHO05D000062 1.5e-09 66.6 124 32.3
Rhsim09G0074400 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.4e-09 65.1 129 33.3
AUR62015305 Chenopodium quinoa HOM05D000107 ORTHO05D000062 5.7e-09 64.7 111 33.3
AUR62042471 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.3e-08 63.5 48 58.3
Rhsim09G0115800 Rhododendron simsii HOM05D005012 ORTHO05D005886 2.2e-08 62.8 133 33.1
CANSAT11G2258 Cannabis sativa HOM05D000107 ORTHO05D000062 2.8e-08 62.4 122 32.8
Rhsim01G0072500 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.3e-08 61.2 123 35.0
Rhsim02G0136100 Rhododendron simsii HOM05D000107 ORTHO05D037465 8.3e-08 60.8 126 34.1
TWI79G0232 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 8.3e-08 60.8 124 32.3
EL10Ac1g02206 Beta vulgaris HOM05D000107 ORTHO05D000062 1.1e-07 60.5 124 31.5
CSS0034159 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.1e-07 60.5 131 31.3
EL10Ac8g19688 Beta vulgaris HOM05D000107 ORTHO05D003213 1.4e-07 60.1 123 29.3
RcHm_v2.0_Chr4g0414991 Rosa chinensis HOM05D000107 ORTHO05D003213 1.8e-07 59.7 122 33.6
EL10Ac6g15567 Beta vulgaris HOM05D000107 ORTHO05D000568 2.4e-07 59.3 124 30.6
CSS0035542 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.4e-07 59.3 131 30.5
PSO063G0443 Papaver somniferum HOM05D000107 ORTHO05D000062 2.4e-07 59.3 127 33.9
Rhsim02G0158700 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.4e-07 59.3 132 32.6
Rhsim03G0202400 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.4e-07 59.3 124 33.1
TAR049G0006 Trochodendron aralioides HOM05D000107 ORTHO05D000062 2.4e-07 59.3 126 32.5
AUR62039442 Chenopodium quinoa HOM05D000107 ORTHO05D000062 3.1e-07 58.9 124 30.6
PSO339G3105 Papaver somniferum HOM05D000107 ORTHO05D000062 4.1e-07 58.5 127 32.3
PSO782G4565 Papaver somniferum HOM05D000107 ORTHO05D000062 4.1e-07 58.5 123 30.1
CSS0006285 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.4e-07 58.2 131 30.5
CSS0013019 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.4e-07 58.2 131 30.5
CSS0020176 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.4e-07 58.2 131 30.5
CSS0020537 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.4e-07 58.2 131 30.5
CSS0022844 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.4e-07 58.2 131 30.5
CSS0033153 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.4e-07 58.2 131 30.5
CSS0036792 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.4e-07 58.2 131 30.5
CSS0038506 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.4e-07 58.2 131 30.5
CSS0043987 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.4e-07 58.2 131 30.5
TPR.G34585 Trifolium pratense HOM05D000107 ORTHO05D000062 5.4e-07 58.2 122 29.5
TPR.G25563 Trifolium pratense HOM05D000107 ORTHO05D000062 7.0e-07 57.8 121 31.4
CANSAT25G1231 Cannabis sativa HOM05D000107 ORTHO05D000062 9.2e-07 57.4 127 29.1
Migut.D01462 Erythranthe guttata HOM05D000107 ORTHO05D000062 9.2e-07 57.4 118 31.4
PSO339G6582 Papaver somniferum HOM05D000107 ORTHO05D000062 9.2e-07 57.4 127 31.5
PSO384G2882 Papaver somniferum HOM05D000107 ORTHO05D000062 9.2e-07 57.4 127 32.3
Rhsim05G0137300 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.2e-07 57.4 127 32.3
Ah.08g223240 Amaranthus hybridus HOM05D000107 ORTHO05D000062 1.2e-06 57.0 129 31.0
CSS0022362 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.2e-06 57.0 135 30.4
CANSAT64G1673 Cannabis sativa HOM05D000107 ORTHO05D000062 1.2e-06 57.0 122 32.8
CANSAT64G2733 Cannabis sativa HOM05D000107 ORTHO05D000062 1.2e-06 57.0 122 32.8
PSO017G1305 Papaver somniferum HOM05D000107 ORTHO05D000062 1.6e-06 56.6 126 29.4
Rhsim11G0067600 Rhododendron simsii HOM05D000107 ORTHO05D000568 1.6e-06 56.6 113 34.5
TPR.G36035 Trifolium pratense HOM05D000107 ORTHO05D000062 1.6e-06 56.6 127 32.3
CANSAT25G2889 Cannabis sativa HOM05D000107 ORTHO05D000062 2.0e-06 56.2 124 29.0
CANSAT54G2952 Cannabis sativa HOM05D000107 ORTHO05D000062 2.0e-06 56.2 124 29.0
CANSAT78G0768 Cannabis sativa HOM05D000107 ORTHO05D000062 2.0e-06 56.2 124 29.0
Hma1.2p1_2133F.1_g314790 Hydrangea macrophylla HOM05D000107 ORTHO05D000062 2.0e-06 56.2 126 31.7
Os06g0271500 Oryza sativa ssp. japonica HOM05D000107 ORTHO05D000062 2.0e-06 56.2 124 29.8
CANSAT54G0103 Cannabis sativa HOM05D000107 ORTHO05D000062 2.7e-06 55.8 124 28.2
AUR62002703 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.7e-06 55.8 108 36.1
PSO017G4380 Papaver somniferum HOM05D000107 ORTHO05D000062 2.7e-06 55.8 127 31.5
CANSAT21G0225 Cannabis sativa HOM05D000107 ORTHO05D000062 3.5e-06 55.5 124 29.0
Lj8C456G3 Lonicera japonica HOM05D000107 ORTHO05D000062 3.5e-06 55.5 125 31.2
Rhsim09G0134500 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.5e-06 55.1 127 30.7
PGSC0003DMG400019085 Solanum tuberosum HOM05D000107 ORTHO05D000062 4.5e-06 55.1 114 28.9
Atru.chr6.2082 Acer truncatum HOM05D000107 ORTHO05D000062 5.9e-06 54.7 126 31.7
CANSAT35G1664 Cannabis sativa HOM05D000107 ORTHO05D000062 5.9e-06 54.7 124 29.0
ECA238G1936 Erigeron canadensis HOM05D000006 ORTHO05D000062 5.9e-06 54.7 126 31.7
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.9e-06 54.7 121 30.6
Rhsim09G0047500 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.9e-06 54.7 121 30.6
RhsimUnG0181200 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.9e-06 54.7 121 30.6
Rhsim01G0081600 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.7e-06 54.3 132 28.8


User provided reference genes

Program Settings