Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.10g024880 Amaranthus hybridus HOM05D003393 ORTHO05D061678 4.3e-56 221.1 112 100.0
Ah.03g149110 Amaranthus hybridus HOM05D003393 ORTHO05D061027 1.7e-23 112.8 57 98.2
Ah.04g158570 Amaranthus hybridus HOM05D003393 ORTHO05D061089 7.0e-14 80.9 42 92.9
Ah.08g218440 Amaranthus hybridus HOM05D003393 ORTHO05D003916 7.2e-11 70.9 40 82.5
AUR62022089 Chenopodium quinoa HOM05D003393 ORTHO05D003916 5.2e-09 64.7 40 77.5
Ah.15g095510 Amaranthus hybridus HOM05D003393 ORTHO05D003916 1.2e-08 63.5 40 75.0
EL10Ac7g18027 Beta vulgaris HOM05D003393 ORTHO05D003916 2.0e-08 62.8 40 75.0
AUR62001231 Chenopodium quinoa HOM05D003393 ORTHO05D003916 5.7e-08 61.2 40 75.0
MBI10_g33730_MAGBIO Magnolia biondii HOM05D003393 ORTHO05D003916 1.7e-07 59.7 40 70.0
Hund05609 Selenicereus undatus HOM05D003393 ORTHO05D003916 3.7e-07 58.5 40 65.0
TAR622G0655 Trochodendron aralioides HOM05D003393 ORTHO05D003916 8.3e-07 57.4 40 67.5
CAN.G126.92 Capsicum annuum HOM05D003393 ORTHO05D003916 1.1e-06 57.0 40 62.5
Dinv11128 Davidia involucrata HOM05D003393 ORTHO05D003916 1.1e-06 57.0 42 61.9
Sc22g0004240 Simmondsia chinensis HOM05D003393 ORTHO05D003916 1.1e-06 57.0 40 65.0
SHI17402 Sapria himalayana HOM05D000105 ORTHO05D000023 1.4e-06 56.6 42 64.3
Aqoxy5G03667 Aquilegia oxysepala HOM05D003393 ORTHO05D003916 1.8e-06 56.2 38 65.8
Prupe.5G162200 Prunus persica HOM05D003393 ORTHO05D003916 1.8e-06 56.2 40 67.5
Peaxi162Scf00801g00734 Petunia axillaris HOM05D003393 ORTHO05D003916 3.1e-06 55.5 40 60.0
CARHR258370 Cardamine hirsuta HOM05D003393 ORTHO05D003916 4.1e-06 55.1 41 61.0
Nn3g16649 Nelumbo nucifera HOM05D003393 ORTHO05D003916 4.1e-06 55.1 44 59.1
PSO017G7265 Papaver somniferum HOM05D003393 ORTHO05D003916 4.1e-06 55.1 40 67.5
Phvul.003G206800 Phaseolus vulgaris HOM05D003393 ORTHO05D003916 4.1e-06 55.1 40 62.5
Sabra15G0109400 Salix brachista HOM05D003393 ORTHO05D003916 4.1e-06 55.1 41 61.0
AT5G50240 Arabidopsis thaliana HOM05D003393 ORTHO05D003916 5.4e-06 54.7 40 62.5
Ca_30675_v3 Cicer arietinum L. HOM05D003393 ORTHO05D003916 5.4e-06 54.7 43 60.5
DCAR_026195 Daucus carota HOM05D003393 ORTHO05D003916 5.4e-06 54.7 38 65.8
Psat5g118080 Pisum sativum HOM05D003393 ORTHO05D003916 5.4e-06 54.7 44 56.8
Actinidia08838 Actinidia chinensis HOM05D003393 ORTHO05D003916 7.0e-06 54.3 40 65.0
ClCG06G017520 Citrullus lanatus HOM05D003393 ORTHO05D003916 7.0e-06 54.3 40 65.0
Nn4g22535 Nelumbo nucifera HOM05D003393 ORTHO05D003916 7.0e-06 54.3 40 62.5
VMungo1215G1394 Vigna mungo HOM05D003393 ORTHO05D003916 7.0e-06 54.3 40 65.0
arahy.Tifrunner.gnm1.ann1.2HQS5R Arachis hypogaea HOM05D003393 ORTHO05D003916 9.1e-06 53.9 40 62.5
Cpa.g.sc4.12 Carica papaya HOM05D003393 ORTHO05D003916 9.1e-06 53.9 40 62.5
Glyma.04G190200 Glycine max HOM05D003393 ORTHO05D003916 9.1e-06 53.9 40 62.5
vmacro16685 Vaccinium macrocarpon HOM05D003393 ORTHO05D003916 9.1e-06 53.9 40 65.0


User provided reference genes

Program Settings