Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.09g237010 Amaranthus hybridus HOM05D012748 ORTHO05D014783 1.6e-42 175.6 88 100.0
Ah.14g088550 Amaranthus hybridus HOM05D012748 ORTHO05D014783 2.7e-21 105.1 90 61.1
EL10As6g23655 Beta vulgaris HOM05D012748 ORTHO05D014783 6.3e-18 94.0 83 61.4
AUR62012558 Chenopodium quinoa HOM05D012748 ORTHO05D014783 8.5e-15 83.6 85 52.9
AUR62014641 Chenopodium quinoa HOM05D012748 ORTHO05D014783 4.2e-14 81.3 85 52.9
AUR62044053 Chenopodium quinoa HOM05D012748 ORTHO05D014783 4.2e-14 81.3 85 52.9
Sc17g0006870 Simmondsia chinensis HOM05D012748 ORTHO05D014783 1.0e-07 60.1 62 56.5
CSS0048777 Camellia sinensis var. sinensis HOM05D007156 ORTHO05D003871 1.4e-06 56.2 61 50.8
Rhsim02G0116500 Rhododendron simsii HOM05D007156 ORTHO05D003871 1.9e-06 55.8 61 54.1
Rhsim13G0163300 Rhododendron simsii HOM05D007156 ORTHO05D003871 1.9e-06 55.8 61 54.1
Dinv17859 Davidia involucrata HOM05D001601 ORTHO05D006936 2.5e-06 55.5 59 50.8
CSS0008619 Camellia sinensis var. sinensis HOM05D007156 ORTHO05D003871 3.2e-06 55.1 51 51.0
PGR004G0170 Punica granatum HOM05D012748 ORTHO05D014783 3.2e-06 55.1 60 46.7
Sc05g0008320 Simmondsia chinensis HOM05D012748 ORTHO05D014783 9.4e-06 53.5 68 48.5


User provided reference genes

Program Settings