Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.09g234870 Amaranthus hybridus HOM05D000007 ORTHO05D000039 6.3e-128 460.7 217 100.0
EL10Ac8g20062 Beta vulgaris HOM05D000007 ORTHO05D000039 4.4e-73 278.5 243 60.1
Hund23467 Selenicereus undatus HOM05D000007 ORTHO05D000039 8.9e-66 254.2 253 50.6
Manes.07G010900 Manihot esculenta HOM05D000007 ORTHO05D000039 3.0e-13 79.7 234 31.2
TWI81G0699 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 3.0e-13 79.7 259 29.3
RcHm_v2.0_Chr1g0344471 Rosa chinensis HOM05D000007 ORTHO05D000039 3.3e-12 76.3 135 36.3
TWI60G1487 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 4.4e-12 75.9 252 31.0
PSO135G0476 Papaver somniferum HOM05D000007 ORTHO05D000017 5.7e-12 75.5 261 27.6
SalBow7G4098 Salvia bowleyana HOM05D000007 ORTHO05D000039 3.7e-11 72.8 156 31.4
Thecc.03G198000 Theobroma cacao HOM05D000007 ORTHO05D000039 1.4e-10 70.9 263 29.7
Manes.07G011100 Manihot esculenta HOM05D000007 ORTHO05D000039 1.8e-10 70.5 248 28.6
FvH4_7g08973 Fragaria vesca HOM05D000007 ORTHO05D000039 2.4e-10 70.1 154 31.2
PSO339G5766 Papaver somniferum HOM05D000007 ORTHO05D000017 2.4e-10 70.1 132 35.6
PSO447G0041 Papaver somniferum HOM05D000007 ORTHO05D000017 2.4e-10 70.1 261 27.2
QL08p040393 Quercus lobata HOM05D000007 ORTHO05D000039 2.4e-10 70.1 250 28.0
Manes.07G007400 Manihot esculenta HOM05D000007 ORTHO05D000039 3.1e-10 69.7 252 25.8
CiPaw.10G155400 Carya illinoinensis HOM05D000007 ORTHO05D000039 5.3e-10 68.9 167 29.3
Cfa007560 Carpinus fangiana HOM05D000007 ORTHO05D000039 6.9e-10 68.6 250 24.4
Haze_14521 Corylus avellana HOM05D000007 ORTHO05D000039 9.1e-10 68.2 251 25.5
Manes.07G039200 Manihot esculenta HOM05D000007 ORTHO05D000039 9.1e-10 68.2 256 27.0
PSO063G2578 Papaver somniferum HOM05D000007 ORTHO05D000017 9.1e-10 68.2 258 26.0
Thecc.10G169100 Theobroma cacao HOM05D000007 ORTHO05D000039 9.1e-10 68.2 246 28.5
Medtr5g059430 Medicago truncatula HOM05D000007 ORTHO05D000039 1.2e-09 67.8 170 30.0
Sopen09g034550 Solanum pennellii HOM05D000007 ORTHO05D000017 1.5e-09 67.4 254 25.2
Actinidia07889 Actinidia chinensis HOM05D000007 ORTHO05D000039 3.4e-09 66.2 254 27.2
MD17G1227400 Malus domestica HOM05D000007 ORTHO05D000039 3.4e-09 66.2 256 25.8
PSO729G0084 Papaver somniferum HOM05D000007 ORTHO05D000017 3.4e-09 66.2 248 25.0
QL02p078646 Quercus lobata HOM05D000007 ORTHO05D000039 4.5e-09 65.9 264 26.5
Aa31LG5G16750 Aethionema arabicum HOM05D000007 ORTHO05D000017 5.9e-09 65.5 250 26.0
Cfa007611 Carpinus fangiana HOM05D000007 ORTHO05D000039 5.9e-09 65.5 248 26.2
Gohir.D08G025877 Gossypium hirsutum HOM05D000007 ORTHO05D000017 7.7e-09 65.1 141 30.5
Gorai.004G022000 Gossypium raimondii HOM05D000007 ORTHO05D000017 7.7e-09 65.1 141 30.5
PSO063G5598 Papaver somniferum HOM05D000007 ORTHO05D000017 7.7e-09 65.1 258 26.4
Sed0017057 Sechium edule HOM05D000007 ORTHO05D000039 7.7e-09 65.1 258 27.1
PSO832G4479 Papaver somniferum HOM05D000007 ORTHO05D000017 1.0e-08 64.7 255 28.2
QL04p019213 Quercus lobata HOM05D000007 ORTHO05D000039 1.3e-08 64.3 257 28.8
Thecc.04G270500 Theobroma cacao HOM05D000007 ORTHO05D000017 1.3e-08 64.3 243 27.2
Haze_02864 Corylus avellana HOM05D000007 ORTHO05D000039 1.7e-08 63.9 137 33.6
Haze_07450 Corylus avellana HOM05D000007 ORTHO05D000039 1.7e-08 63.9 133 31.6
Medtr5g037680 Medicago truncatula HOM05D000007 ORTHO05D000039 1.7e-08 63.9 156 32.7
PSO063G5227 Papaver somniferum HOM05D000007 ORTHO05D000017 1.7e-08 63.9 238 24.8
Phvul.004G051500 Phaseolus vulgaris HOM05D000222 ORTHO05D000039 1.7e-08 63.9 143 32.9
GSVIVG01026026001 Vitis vinifera HOM05D000007 ORTHO05D000017 1.7e-08 63.9 135 28.9
Oeu011073.1 Olea europaea HOM05D000007 ORTHO05D000039 2.2e-08 63.5 138 30.4
Duzib205G0695 Durio zibethinus HOM05D000007 ORTHO05D000039 2.9e-08 63.2 255 27.8
Manes.10G077179 Manihot esculenta HOM05D000007 ORTHO05D000039 3.8e-08 62.8 252 27.4
Dinv04899 Davidia involucrata HOM05D000007 ORTHO05D000039 5.0e-08 62.4 141 31.2
Dinv24586 Davidia involucrata HOM05D000007 ORTHO05D000039 5.0e-08 62.4 251 26.7
Hma1.2p1_0036F.1_g023680 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 5.0e-08 62.4 248 25.8
TWI31G1434 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 5.0e-08 62.4 257 26.8
Cfa017234 Carpinus fangiana HOM05D000007 ORTHO05D000039 6.5e-08 62.0 260 26.2
COL.COLO4_22623 Corchorus olitorius HOM05D000007 ORTHO05D000039 6.5e-08 62.0 250 29.2
Psat2g005280 Pisum sativum HOM05D000007 ORTHO05D000039 6.5e-08 62.0 121 31.4
Prupe.3G013500 Prunus persica HOM05D000007 ORTHO05D000039 6.5e-08 62.0 131 31.3
Aqoxy2G00678 Aquilegia oxysepala HOM05D000007 ORTHO05D000039 8.5e-08 61.6 137 30.7
CAN.G484.1 Capsicum annuum HOM05D000007 ORTHO05D000017 8.5e-08 61.6 150 30.7
PSO675G8287 Papaver somniferum HOM05D000007 ORTHO05D000017 8.5e-08 61.6 246 26.8
QL08p040512 Quercus lobata HOM05D000007 ORTHO05D000039 8.5e-08 61.6 204 29.4
MSTRG.15075 Avicennia marina HOM05D000007 ORTHO05D000039 1.1e-07 61.2 156 29.5
Dinv44148 Davidia involucrata HOM05D000007 ORTHO05D018881 1.1e-07 61.2 133 31.6
Lj1C654T3 Lonicera japonica HOM05D000007 ORTHO05D000039 1.1e-07 61.2 268 25.7
PSO675G7348 Papaver somniferum HOM05D000007 ORTHO05D000017 1.1e-07 61.2 259 24.7
Actinidia10577 Actinidia chinensis HOM05D000007 ORTHO05D000039 1.4e-07 60.8 254 25.6
Medtr5g069390 Medicago truncatula HOM05D000007 ORTHO05D000039 1.4e-07 60.8 147 31.3
PSO210G2791 Papaver somniferum HOM05D000007 ORTHO05D000017 1.4e-07 60.8 264 24.2
DCAR_019956 Daucus carota HOM05D000007 ORTHO05D000017 1.9e-07 60.5 145 33.1
TWI18G1039 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.9e-07 60.5 241 25.7
COL.COLO4_13989 Corchorus olitorius HOM05D000007 ORTHO05D000017 2.5e-07 60.1 243 28.4
Haze_20134 Corylus avellana HOM05D000007 ORTHO05D000039 2.5e-07 60.1 96 32.3
PSO675G4126 Papaver somniferum HOM05D000007 ORTHO05D000017 2.5e-07 60.1 253 26.9
QL08p013898 Quercus lobata HOM05D000007 ORTHO05D000039 2.5e-07 60.1 259 27.0
Cfa017236 Carpinus fangiana HOM05D000007 ORTHO05D000039 4.2e-07 59.3 251 25.5
Gohir.D08G025866 Gossypium hirsutum HOM05D000007 ORTHO05D000017 4.2e-07 59.3 143 31.5
Gorai.004G021900 Gossypium raimondii HOM05D000007 ORTHO05D000017 4.2e-07 59.3 143 31.5
DCAR_023489 Daucus carota HOM05D000007 ORTHO05D000017 5.5e-07 58.9 131 29.8
Migut.H02131 Erythranthe guttata HOM05D000007 ORTHO05D000039 5.5e-07 58.9 135 29.6
MD16G1129700 Malus domestica HOM05D000007 ORTHO05D000039 5.5e-07 58.9 255 25.9
PSO832G0828 Papaver somniferum HOM05D000007 ORTHO05D000017 5.5e-07 58.9 134 29.9
QL04p026044 Quercus lobata HOM05D000007 ORTHO05D000039 5.5e-07 58.9 282 27.0
Ca_22994_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000039 7.2e-07 58.5 159 28.9
Ca_31000_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000039 7.2e-07 58.5 159 28.9
COL.COLO4_14803 Corchorus olitorius HOM05D000007 ORTHO05D000039 7.2e-07 58.5 141 27.7
Migut.M00201 Erythranthe guttata HOM05D000007 ORTHO05D000039 7.2e-07 58.5 153 27.5
Lalb_Chr01g0007641 Lupinus albus HOM05D000007 ORTHO05D000039 7.2e-07 58.5 163 28.2
PSO832G4473 Papaver somniferum HOM05D000007 ORTHO05D000017 7.2e-07 58.5 258 25.6
PGSC0003DMG400046798 Solanum tuberosum HOM05D000007 ORTHO05D000017 7.2e-07 58.5 249 24.5
FAN23G1318 Fragaria x ananassa HOM05D000007 ORTHO05D000039 9.4e-07 58.2 251 25.5
Hma1.2p1_0178F.1_g078420 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 9.4e-07 58.2 264 25.0
Lj1P674T76 Lonicera japonica HOM05D000007 ORTHO05D000039 9.4e-07 58.2 193 26.4
Sed0002351 Sechium edule HOM05D000007 ORTHO05D000039 9.4e-07 58.2 258 26.0
vmacro00488 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 9.4e-07 58.2 136 32.4
Cc05_g08700 Coffea canephora HOM05D000007 ORTHO05D000039 1.2e-06 57.8 251 23.5
COL.COLO4_31811 Corchorus olitorius HOM05D000007 ORTHO05D000039 1.2e-06 57.8 131 26.7
FAN18G2360 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.2e-06 57.8 154 27.3
FAN18G4462 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.2e-06 57.8 154 27.3
DCAR_010588 Daucus carota HOM05D000007 ORTHO05D000039 1.6e-06 57.4 138 31.2
MD09G1281100 Malus domestica HOM05D000007 ORTHO05D000039 1.6e-06 57.4 156 30.8
PSO339G6158 Papaver somniferum HOM05D000007 ORTHO05D000017 1.6e-06 57.4 158 27.8
COL.COLO4_07578 Corchorus olitorius HOM05D000007 ORTHO05D000017 2.1e-06 57.0 162 29.6
DCAR_031133 Daucus carota HOM05D000007 ORTHO05D000039 2.1e-06 57.0 132 28.8
Lj1C674T3 Lonicera japonica HOM05D000007 ORTHO05D000039 2.1e-06 57.0 255 25.9
PSO339G6215 Papaver somniferum HOM05D000007 ORTHO05D000017 2.1e-06 57.0 139 26.6
PSO384G4185 Papaver somniferum HOM05D000007 ORTHO05D000676 2.1e-06 57.0 161 26.7
Ca_02472_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000039 2.7e-06 56.6 167 28.7
Haze_20972 Corylus avellana HOM05D000007 ORTHO05D000039 2.7e-06 56.6 160 33.1
Lj1A530T29 Lonicera japonica HOM05D000007 ORTHO05D000039 2.7e-06 56.6 224 25.9
QL07p035948 Quercus lobata HOM05D000007 ORTHO05D000039 2.7e-06 56.6 261 27.2
Dinv04466 Davidia involucrata HOM05D000007 ORTHO05D000039 3.6e-06 56.2 230 26.1
Duzib147G0121 Durio zibethinus HOM05D000007 ORTHO05D000039 3.6e-06 56.2 253 24.1
FvH4_5g11830 Fragaria vesca HOM05D000007 ORTHO05D000039 3.6e-06 56.2 119 29.4
PSO384G0988 Papaver somniferum HOM05D000007 ORTHO05D000017 3.6e-06 56.2 253 25.3
PSO384G1088 Papaver somniferum HOM05D000007 ORTHO05D000017 3.6e-06 56.2 249 24.9
Rhsim09G0013900 Rhododendron simsii HOM05D000007 ORTHO05D000039 3.6e-06 56.2 261 25.7
Aqoxy1G02132 Aquilegia oxysepala HOM05D000007 ORTHO05D000039 4.7e-06 55.8 163 29.4
Lalb_Chr19g0132591 Lupinus albus HOM05D000007 ORTHO05D000039 4.7e-06 55.8 133 31.6
Actinidia11172 Actinidia chinensis HOM05D000007 ORTHO05D000039 6.1e-06 55.5 219 24.7
RcHm_v2.0_Chr1g0380591 Rosa chinensis HOM05D000007 ORTHO05D000017 6.1e-06 55.5 138 31.2
PGSC0003DMG400029654 Solanum tuberosum HOM05D000007 ORTHO05D000017 6.1e-06 55.5 140 27.9
Manes.04G085700 Manihot esculenta HOM05D000007 ORTHO05D000039 7.9e-06 55.1 130 31.5
PSO541G1209 Papaver somniferum HOM05D000007 ORTHO05D000017 7.9e-06 55.1 103 32.0
Peaxi162Scf00066g01632 Petunia axillaris HOM05D000007 ORTHO05D000039 7.9e-06 55.1 242 26.9
PGSC0003DMG400036000 Solanum tuberosum HOM05D000007 ORTHO05D000017 7.9e-06 55.1 158 26.6
PGSC0003DMG400039496 Solanum tuberosum HOM05D000007 ORTHO05D000017 7.9e-06 55.1 158 25.9


User provided reference genes

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