Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.09g234750 Amaranthus hybridus HOM05D006957 ORTHO05D008647 9.5e-217 756.5 373 100.0
AUR62021927 Chenopodium quinoa HOM05D006957 ORTHO05D008647 1.7e-112 410.2 272 73.9
AUR62012727 Chenopodium quinoa HOM05D006957 ORTHO05D008647 9.2e-111 404.4 272 73.9
EL10Ac8g20084 Beta vulgaris HOM05D006957 ORTHO05D008647 2.1e-107 393.3 272 73.2
Hund21421 Selenicereus undatus HOM05D006957 ORTHO05D008647 4.7e-99 365.5 276 67.4
CAN.G1014.10 Capsicum annuum HOM05D006957 ORTHO05D008647 1.2e-86 324.3 272 61.0
COL.COLO4_31796 Corchorus olitorius HOM05D006957 ORTHO05D008647 2.1e-86 323.6 194 79.4
Lj1A1232T100 Lonicera japonica HOM05D006957 ORTHO05D008647 2.7e-86 323.2 273 61.5
CSS0002589 Camellia sinensis var. sinensis HOM05D006957 ORTHO05D008647 6.0e-86 322.0 272 60.7
Thecc.06G223400 Theobroma cacao HOM05D006957 ORTHO05D008647 2.3e-85 320.1 194 78.9
Ciclev10016210m.g Citrus clementina HOM05D006957 ORTHO05D008647 3.0e-85 319.7 280 59.6
Atru.chr10.2253 Acer truncatum HOM05D006957 ORTHO05D008647 3.9e-85 319.3 278 59.0
Gorai.010G181400 Gossypium raimondii HOM05D006957 ORTHO05D008647 3.9e-85 319.3 206 74.8
VMungo1215G0309 Vigna mungo HOM05D006957 ORTHO05D008647 8.7e-85 318.2 288 60.4
Glyma.07G262000 Glycine max HOM05D006957 ORTHO05D008647 1.1e-84 317.8 290 60.7
Dinv13912 Davidia involucrata HOM05D006957 ORTHO05D008647 1.5e-84 317.4 272 60.7
Gohir.D06G155200 Gossypium hirsutum HOM05D006957 ORTHO05D008647 1.5e-84 317.4 208 73.6
Migut.M01335 Erythranthe guttata HOM05D006957 ORTHO05D008647 3.3e-84 316.2 272 57.7
FvH4_3g43300 Fragaria vesca HOM05D006957 ORTHO05D008647 3.3e-84 316.2 195 77.4
Gohir.A06G149100 Gossypium hirsutum HOM05D006957 ORTHO05D008647 3.3e-84 316.2 208 73.6
Sopen02g025470 Solanum pennellii HOM05D006957 ORTHO05D008647 4.3e-84 315.8 272 59.2
PGSC0003DMG400016446 Solanum tuberosum HOM05D006957 ORTHO05D008647 9.6e-84 314.7 270 59.3
Manes.17G025800 Manihot esculenta HOM05D006957 ORTHO05D008647 1.2e-83 314.3 263 60.8
Duzib160G0853 Durio zibethinus HOM05D006957 ORTHO05D008647 2.1e-83 313.5 201 76.1
Solyc02g080780.3 Solanum lycopersicum HOM05D006957 ORTHO05D008647 2.1e-83 313.5 272 58.8
GSVIVG01012704001 Vitis vinifera HOM05D006957 ORTHO05D008647 2.8e-83 313.2 239 66.1
ClCG01G021850 Citrullus lanatus HOM05D006957 ORTHO05D008647 3.6e-83 312.8 283 58.3
MSTRG.7198 Avicennia marina HOM05D006957 ORTHO05D008647 6.2e-83 312.0 272 57.4
Cc09_g01500 Coffea canephora HOM05D006957 ORTHO05D008647 8.1e-83 311.6 272 59.6
Eucgr.L02772 Eucalyptus grandis HOM05D006957 ORTHO05D008647 2.4e-82 310.1 280 59.3
vmacro15796 Vaccinium macrocarpon HOM05D006957 ORTHO05D008647 2.4e-82 310.1 272 59.6
Peaxi162Scf00178g01715 Petunia axillaris HOM05D006957 ORTHO05D008647 4.0e-82 309.3 270 58.5
RcHm_v2.0_Chr5g0077361 Rosa chinensis HOM05D006957 ORTHO05D008647 4.0e-82 309.3 194 76.3
QL05p072698 Quercus lobata HOM05D006957 ORTHO05D008647 6.9e-82 308.5 277 58.1
TWI38G1647 Tripterygium wilfordii HOM05D006957 ORTHO05D008647 6.9e-82 308.5 272 57.0
Potri.011G006700 Populus trichocarpa HOM05D006957 ORTHO05D008647 9.0e-82 308.1 269 59.1
PGR042G2408 Punica granatum HOM05D006957 ORTHO05D008647 9.0e-82 308.1 195 74.9
FAN11G3374 Fragaria x ananassa HOM05D006957 ORTHO05D008647 2.6e-81 306.6 210 72.4
FAN16G3059 Fragaria x ananassa HOM05D006957 ORTHO05D008647 2.6e-81 306.6 203 73.9
Glyma.17G012100 Glycine max HOM05D006957 ORTHO05D008647 4.4e-81 305.8 205 72.2
Cfa000203 Carpinus fangiana HOM05D006957 ORTHO05D008647 5.8e-81 305.4 254 63.0
FAN21G2957 Fragaria x ananassa HOM05D006957 ORTHO05D008647 1.3e-80 304.3 210 71.9
CANSAT56G0113 Cannabis sativa HOM05D006957 ORTHO05D008647 2.9e-80 303.1 281 58.0
DCAR_028192 Daucus carota HOM05D006957 ORTHO05D008647 4.9e-80 302.4 194 73.7
FAN25G2833 Fragaria x ananassa HOM05D006957 ORTHO05D008647 4.9e-80 302.4 209 71.8
Lj4g0000977 Lotus japonicus HOM05D006957 ORTHO05D008647 4.9e-80 302.4 196 75.5
Phvul.003G080300 Phaseolus vulgaris HOM05D006957 ORTHO05D008647 8.4e-80 301.6 283 59.7
Eucgr.E03906 Eucalyptus grandis HOM05D006957 ORTHO05D008647 1.1e-79 301.2 280 58.9
TAR629G0592 Trochodendron aralioides HOM05D006957 ORTHO05D008647 1.1e-79 301.2 272 57.7
ECA234G3681 Erigeron canadensis HOM05D006957 ORTHO05D008647 1.4e-79 300.8 208 72.1
Lsat_1_v5_gn_4_59280 Lactuca sativa HOM05D006957 ORTHO05D008647 1.9e-79 300.4 214 71.0
Prupe.6G022000 Prunus persica HOM05D006957 ORTHO05D008647 1.9e-79 300.4 195 74.9
Sed0022215 Sechium edule HOM05D006957 ORTHO05D008647 4.2e-79 299.3 263 59.7
MELO3C007402.2 Cucumis melo HOM05D006957 ORTHO05D008647 5.4e-79 298.9 263 59.3
arahy.Tifrunner.gnm1.ann1.SK97UM Arachis hypogaea HOM05D006957 ORTHO05D008647 7.1e-79 298.5 274 58.4
arahy.Tifrunner.gnm1.ann1.VHEB9D Arachis hypogaea HOM05D006957 ORTHO05D008647 7.1e-79 298.5 274 58.4
Duzib192G0359 Durio zibethinus HOM05D006957 ORTHO05D008647 7.1e-79 298.5 199 72.4
Sabra04G0005100 Salix brachista HOM05D006957 ORTHO05D008647 9.3e-79 298.1 186 75.3
CsaV3_6G048910 Cucumis sativus L. HOM05D006957 ORTHO05D008647 1.2e-78 297.7 263 60.8
Lalb_Chr07g0177131 Lupinus albus HOM05D006957 ORTHO05D008647 1.2e-78 297.7 285 58.2
Nitab4.5_0007963g0030 Nicotiana tabacum HOM05D006957 ORTHO05D008647 1.2e-78 297.7 272 56.6
MD11G1027900 Malus domestica HOM05D006957 ORTHO05D008647 2.7e-78 296.6 194 73.2
PSO832G3220 Papaver somniferum HOM05D006957 ORTHO05D008647 7.8e-78 295.0 195 73.8
Sc05g0009300 Simmondsia chinensis HOM05D006957 ORTHO05D008647 7.8e-78 295.0 240 60.4
SGA_v2.0_scaffold4G01906 Striga asiatica HOM05D006957 ORTHO05D008647 7.8e-78 295.0 244 61.5
Aqoxy4G01856 Aquilegia oxysepala HOM05D006957 ORTHO05D008647 1.0e-77 294.7 194 71.1
HanXRQChr16g0515501 Helianthus annuus HOM05D006957 ORTHO05D008647 1.3e-77 294.3 198 73.2
Nitab4.5_0002695g0060 Nicotiana tabacum HOM05D006957 ORTHO05D008647 1.3e-77 294.3 272 56.6
Rhsim02G0105900 Rhododendron simsii HOM05D006957 ORTHO05D008647 1.3e-77 294.3 208 69.2
MBI18_g04903_MAGBIO Magnolia biondii HOM05D006957 ORTHO05D008647 1.7e-77 293.9 194 72.2
Haze_06820 Corylus avellana HOM05D006957 ORTHO05D008647 3.9e-77 292.7 312 54.5
TPR.G29296 Trifolium pratense HOM05D006957 ORTHO05D008647 5.6e-76 288.9 190 73.2
Os03g0744700 Oryza sativa ssp. japonica HOM05D006957 ORTHO05D008647 1.3e-75 287.7 200 68.5
Ca_21073_v3 Cicer arietinum L. HOM05D006957 ORTHO05D008647 1.6e-75 287.3 189 73.5
SalBow8G2851 Salvia bowleyana HOM05D006957 ORTHO05D008647 6.2e-75 285.4 182 74.2
Medtr4g132350 Medicago truncatula HOM05D006957 ORTHO05D008647 1.1e-74 284.6 206 68.9
THA.LOC104818712 Tarenaya hassleriana HOM05D006957 ORTHO05D008647 2.4e-74 283.5 274 54.4
unitig_748.g7953 Utricularia gibba HOM05D006957 ORTHO05D008647 2.4e-74 283.5 195 69.7
Psat4g006040 Pisum sativum HOM05D006957 ORTHO05D008647 6.9e-74 282.0 194 73.2
QL02p099916 Quercus lobata HOM05D006957 ORTHO05D008647 1.5e-73 280.8 179 74.9
AL2G13680 Arabidopsis lyrata HOM05D006957 ORTHO05D008647 7.6e-73 278.5 196 67.3
BcaC06g31885 Brassica carinata HOM05D006957 ORTHO05D008647 1.3e-72 277.7 194 68.0
Actinidia11860 Actinidia chinensis HOM05D006957 ORTHO05D008647 1.7e-72 277.3 272 55.1
ATR0794G153 Amborella trichopoda HOM05D006957 ORTHO05D008647 1.7e-72 277.3 179 72.1
AT1G62250 Arabidopsis thaliana HOM05D006957 ORTHO05D008647 2.2e-72 276.9 196 66.3
Thhalv10023639m.g Eutrema salsugineum HOM05D006957 ORTHO05D008647 1.1e-71 274.6 192 67.7
Sp2g02390 Schrenkiella parvula HOM05D006957 ORTHO05D008647 4.2e-71 272.7 194 64.9
BcaC02g10501 Brassica carinata HOM05D006957 ORTHO05D008647 7.1e-71 271.9 195 66.7
C04p28180 Brassica napus HOM05D006957 ORTHO05D008647 7.1e-71 271.9 195 66.7
BolC4t24361H Brassica oleracea HOM05D006957 ORTHO05D008647 7.1e-71 271.9 195 66.7
BolC4t24891H Brassica oleracea HOM05D006957 ORTHO05D008647 1.2e-70 271.2 193 67.4
Carub.0002s0276 Capsella rubella HOM05D006957 ORTHO05D008647 1.2e-70 271.2 195 66.7
Zm00001eb056950 Zea mays HOM05D006957 ORTHO05D008647 3.9e-69 266.2 181 69.1
A03p67500 Brassica napus HOM05D006957 ORTHO05D008647 7.4e-68 261.9 183 68.9
BraA01t02718Z Brassica rapa HOM05D006957 ORTHO05D008647 7.4e-68 261.9 183 68.9
Nn1g07184 Nelumbo nucifera HOM05D006957 ORTHO05D008647 9.9e-65 251.5 211 62.1
CiPaw.09G093600 Carya illinoinensis HOM05D006957 ORTHO05D008647 1.3e-64 251.1 167 71.3
CDE05G2181 Ceratophyllum demersum HOM05D006957 ORTHO05D008647 3.8e-64 249.6 191 61.3
BcaC02g10063 Brassica carinata HOM05D006957 ORTHO05D008647 3.5e-62 243.0 160 70.6
Mapoly0071s0090 Marchantia polymorpha HOM05D006957 ORTHO05D008647 6.5e-56 222.2 193 54.9
Pp3c10_11430 Physcomitrium patens HOM05D006957 ORTHO05D008647 3.5e-54 216.5 183 56.3
C04p33270 Brassica napus HOM05D006957 ORTHO05D008647 6.1e-46 189.1 140 62.9
SMO347G0662 Selaginella moellendorffii HOM05D006957 ORTHO05D008647 3.9e-45 186.4 180 52.8
CiPaw.10G072800 Carya illinoinensis HOM05D006957 ORTHO05D008647 2.8e-43 180.3 115 77.4
Oeu051204.1 Olea europaea HOM05D006957 ORTHO05D008647 1.2e-38 164.9 98 77.6
arahy.Tifrunner.gnm1.ann1.EAEB6D Arachis hypogaea HOM05D006957 ORTHO05D008647 7.4e-28 129.0 93 66.7
TAR627G0415 Trochodendron aralioides HOM05D006957 ORTHO05D008647 4.2e-23 113.2 80 66.2
Dinv20064 Davidia involucrata HOM05D006957 ORTHO05D008647 2.1e-22 110.9 135 47.4
SEGI_02842 Sequoiadendron giganteum HOM05D006957 ORTHO05D008647 4.4e-20 103.2 86 55.8
CiPaw.10G072900 Carya illinoinensis HOM05D006957 ORTHO05D008647 5.3e-18 96.3 87 57.5
Cre02.g141850 Chlamydomonas reinhardtii HOM05D006957 ORTHO05D008647 1.3e-11 75.1 191 26.7
AagrBONN_evm.TU.Sc2ySwM_228.4491 Anthoceros agrestis HOM05D006957 ORTHO05D008647 3.7e-11 73.6 87 42.5


User provided reference genes

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