Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.09g233690 Amaranthus hybridus HOM05D000566 ORTHO05D008456 2.8e-103 378.6 193 100.0
AUR62036584 Chenopodium quinoa HOM05D000566 ORTHO05D008456 2.6e-64 249.2 140 90.0
Lj4g0018718 Lotus japonicus HOM05D000566 ORTHO05D008456 1.7e-60 236.5 176 71.6
EL10Ac8g20507 Beta vulgaris HOM05D000566 ORTHO05D008456 2.2e-60 236.1 218 66.1
Hund23960 Selenicereus undatus HOM05D000566 ORTHO05D008456 5.0e-60 235.0 190 72.1
Manes.16G037200 Manihot esculenta HOM05D000566 ORTHO05D008456 1.1e-59 233.8 193 67.9
vmacro03936 Vaccinium macrocarpon HOM05D000566 ORTHO05D008456 1.1e-59 233.8 148 81.8
Sc05g0007190 Simmondsia chinensis HOM05D000566 ORTHO05D008456 1.5e-59 233.4 175 74.3
MELO3C007220.2 Cucumis melo HOM05D000566 ORTHO05D008456 1.9e-59 233.0 154 81.2
COL.COLO4_31322 Corchorus olitorius HOM05D000566 ORTHO05D000686 2.5e-59 232.6 190 68.9
Duzib192G0190 Durio zibethinus HOM05D000566 ORTHO05D008456 2.5e-59 232.6 152 77.6
TPR.G16280 Trifolium pratense HOM05D000566 ORTHO05D008456 2.5e-59 232.6 159 75.5
Gohir.A06G134006 Gossypium hirsutum HOM05D000566 ORTHO05D008456 5.5e-59 231.5 152 77.6
TWI38G1860 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 5.5e-59 231.5 151 80.8
Gohir.D06G136400 Gossypium hirsutum HOM05D000566 ORTHO05D008456 9.4e-59 230.7 152 77.6
Gorai.010G158600 Gossypium raimondii HOM05D000566 ORTHO05D008456 9.4e-59 230.7 152 77.6
Peaxi162Scf01479g00012 Petunia axillaris HOM05D000566 ORTHO05D008456 9.4e-59 230.7 144 80.6
FAN25G1525 Fragaria x ananassa HOM05D000566 ORTHO05D000686 1.2e-58 230.3 152 77.0
Ciclev10016472m.g Citrus clementina HOM05D000566 ORTHO05D008456 1.6e-58 229.9 142 81.7
RcHm_v2.0_Chr5g0010321 Rosa chinensis HOM05D000566 ORTHO05D008456 1.6e-58 229.9 152 76.3
Cfa000591 Carpinus fangiana HOM05D000566 ORTHO05D008456 2.1e-58 229.6 170 71.2
QL05p046292 Quercus lobata HOM05D000566 ORTHO05D008456 2.1e-58 229.6 120 92.5
Hma1.2p1_0437F.1_g152980 Hydrangea macrophylla HOM05D000566 ORTHO05D008456 2.7e-58 229.2 202 64.9
Lsat_1_v5_gn_4_50020 Lactuca sativa HOM05D000566 ORTHO05D008456 3.6e-58 228.8 139 84.2
Actinidia16807 Actinidia chinensis HOM05D000566 ORTHO05D008456 6.1e-58 228.0 135 85.9
CANSAT35G0195 Cannabis sativa HOM05D000566 ORTHO05D008456 6.1e-58 228.0 197 65.5
HanXRQChr07g0186931 Helianthus annuus HOM05D000566 ORTHO05D008456 6.1e-58 228.0 139 82.7
Thecc.06G173200 Theobroma cacao HOM05D000566 ORTHO05D008456 6.1e-58 228.0 142 80.3
SGA_v2.0_scaffold1G00030 Striga asiatica HOM05D000566 ORTHO05D008456 8.0e-58 227.6 167 71.9
Glyma.13G171000 Glycine max HOM05D000566 ORTHO05D008456 1.4e-57 226.9 132 85.6
Dinv04627 Davidia involucrata HOM05D000566 ORTHO05D008456 1.8e-57 226.5 196 63.3
Atru.chr10.1700 Acer truncatum HOM05D000566 ORTHO05D008456 2.3e-57 226.1 168 72.6
Lalb_Chr05g0218771 Lupinus albus HOM05D000566 ORTHO05D008456 2.3e-57 226.1 143 83.2
MD10G1282600 Malus domestica HOM05D000566 ORTHO05D008456 2.3e-57 226.1 155 73.5
Rhsim13G0191700 Rhododendron simsii HOM05D000566 ORTHO05D000686 2.3e-57 226.1 188 67.0
TAR626G0526 Trochodendron aralioides HOM05D000566 ORTHO05D008456 2.3e-57 226.1 184 69.0
CiPaw.09G068300 Carya illinoinensis HOM05D000566 ORTHO05D008456 3.0e-57 225.7 172 71.5
Ca_26053_v3 Cicer arietinum L. HOM05D000566 ORTHO05D008456 3.0e-57 225.7 135 84.4
Phvul.003G058300 Phaseolus vulgaris HOM05D000566 ORTHO05D008456 3.0e-57 225.7 147 78.9
ECA234G0195 Erigeron canadensis HOM05D000566 ORTHO05D000686 3.9e-57 225.3 135 83.0
Oeu039926.1 Olea europaea HOM05D000566 ORTHO05D008456 3.9e-57 225.3 140 80.7
THA.LOC104814247 Tarenaya hassleriana HOM05D000566 ORTHO05D008456 3.9e-57 225.3 163 74.2
Psat7g118880 Pisum sativum HOM05D000566 ORTHO05D008456 5.2e-57 224.9 160 73.1
MSTRG.7396 Avicennia marina HOM05D000566 ORTHO05D008456 6.7e-57 224.6 140 80.7
FAN21G0306 Fragaria x ananassa HOM05D000566 ORTHO05D008456 6.7e-57 224.6 173 68.8
Medtr4g087750 Medicago truncatula HOM05D000566 ORTHO05D008456 6.7e-57 224.6 130 86.2
PSO675G8854 Papaver somniferum HOM05D000566 ORTHO05D008456 6.7e-57 224.6 138 81.2
Cc02_g14640 Coffea canephora HOM05D000566 ORTHO05D008456 8.8e-57 224.2 120 91.7
Lalb_Chr16g0384251 Lupinus albus HOM05D000566 ORTHO05D008456 8.8e-57 224.2 184 68.5
FvH4_3g07991 Fragaria vesca HOM05D000566 ORTHO05D008456 1.1e-56 223.8 191 64.4
Prupe.4G059300 Prunus persica HOM05D000566 ORTHO05D008456 1.1e-56 223.8 152 75.7
PSO541G3700 Papaver somniferum HOM05D000566 ORTHO05D008456 2.0e-56 223.0 138 80.4
FAN11G2813 Fragaria x ananassa HOM05D000566 ORTHO05D008456 2.6e-56 222.6 191 63.9
Migut.M01050 Erythranthe guttata HOM05D000566 ORTHO05D008456 3.3e-56 222.2 159 72.3
PGSC0003DMG401022314 Solanum tuberosum HOM05D000566 ORTHO05D008456 4.4e-56 221.9 127 86.6
Aqoxy1G03201 Aquilegia oxysepala HOM05D000566 ORTHO05D008456 5.7e-56 221.5 127 86.6
CAN.G337.143 Capsicum annuum HOM05D000566 ORTHO05D008456 5.7e-56 221.5 127 85.8
ClCG01G023650 Citrullus lanatus HOM05D000566 ORTHO05D008456 5.7e-56 221.5 176 67.6
Eucgr.E02712 Eucalyptus grandis HOM05D000566 ORTHO05D008456 5.7e-56 221.5 147 78.2
GSVIVG01021190001 Vitis vinifera HOM05D000566 ORTHO05D008456 5.7e-56 221.5 120 90.8
Sp1g24970 Schrenkiella parvula HOM05D000566 ORTHO05D008456 7.4e-56 221.1 159 71.7
Medtr4g087740 Medicago truncatula HOM05D000566 ORTHO05D008456 9.7e-56 220.7 137 80.3
VMungo0251G1655 Vigna mungo HOM05D000566 ORTHO05D008456 9.7e-56 220.7 148 76.4
unitig_699.g19342 Utricularia gibba HOM05D000566 ORTHO05D008456 1.3e-55 220.3 129 83.7
A07p11000 Brassica napus HOM05D000566 ORTHO05D008456 1.7e-55 219.9 193 63.7
BraA07t28892Z Brassica rapa HOM05D000566 ORTHO05D008456 1.7e-55 219.9 193 63.7
Potri.011G064600 Populus trichocarpa HOM05D000566 ORTHO05D008456 2.2e-55 219.5 185 67.6
DCAR_004017 Daucus carota HOM05D000566 ORTHO05D008456 2.8e-55 219.2 143 78.3
Sed0006380 Sechium edule HOM05D000566 ORTHO05D008456 2.8e-55 219.2 169 71.0
Solyc07g064690.1 Solanum lycopersicum HOM05D000566 ORTHO05D008456 3.7e-55 218.8 127 85.8
Carub.0001s2723 Capsella rubella HOM05D000566 ORTHO05D008456 4.8e-55 218.4 140 78.6
Haze_06259 Corylus avellana HOM05D000566 ORTHO05D008456 4.8e-55 218.4 174 67.2
SalBow8G0706 Salvia bowleyana HOM05D000566 ORTHO05D008456 6.3e-55 218.0 164 68.9
Sopen07g032890 Solanum pennellii HOM05D000566 ORTHO05D008456 8.2e-55 217.6 120 89.2
BolC7t42164H Brassica oleracea HOM05D000566 ORTHO05D008456 1.1e-54 217.2 193 60.6
BcaC06g35392 Brassica carinata HOM05D000566 ORTHO05D008456 1.4e-54 216.9 193 60.6
Thhalv10009067m.g Eutrema salsugineum HOM05D000566 ORTHO05D008456 2.4e-54 216.1 140 77.9
C07p16640 Brassica napus HOM05D000566 ORTHO05D008456 5.3e-54 214.9 193 59.6
PGR042G3563 Punica granatum HOM05D000566 ORTHO05D008456 9.1e-54 214.2 177 64.4
Sabra11G0046400 Salix brachista HOM05D000566 ORTHO05D008456 9.1e-54 214.2 193 63.7
BcaB03g13911 Brassica carinata HOM05D000566 ORTHO05D008456 1.2e-53 213.8 193 59.6
CDE02G2902 Ceratophyllum demersum HOM05D000566 ORTHO05D008456 1.2e-53 213.8 131 82.4
AT1G29040 Arabidopsis thaliana HOM05D000566 ORTHO05D008456 2.6e-53 212.6 171 64.9
CARHR028250 Cardamine hirsuta HOM05D000566 ORTHO05D008456 3.5e-53 212.2 195 61.0
HPP92_024140 Vanilla planifolia HOM05D000566 ORTHO05D008456 1.0e-52 210.7 132 78.8
AL1G42750 Arabidopsis lyrata HOM05D000566 ORTHO05D008456 1.3e-52 210.3 140 75.7
Pp3c23_18520 Physcomitrium patens HOM05D000566 ORTHO05D008456 3.8e-52 208.8 120 81.7
Lj2A297T108 Lonicera japonica HOM05D000566 ORTHO05D008456 5.0e-52 208.4 172 66.9
MBI06_g25985_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 1.1e-51 207.2 120 84.2
Nitab4.5_0000206g0050 Nicotiana tabacum HOM05D000566 ORTHO05D008456 1.1e-51 207.2 140 75.0
Peaxi162Scf01070g00226 Petunia axillaris HOM05D000566 ORTHO05D008456 1.5e-51 206.8 195 59.5
Os01g0613300 Oryza sativa ssp. japonica HOM05D000566 ORTHO05D008456 1.2e-50 203.8 125 80.8
Pp3c24_14610 Physcomitrium patens HOM05D000566 ORTHO05D008456 3.6e-50 202.2 139 69.8
Zm00001eb162000 Zea mays HOM05D000566 ORTHO05D008456 8.0e-50 201.1 156 67.9
Aa31LG6G11510 Aethionema arabicum HOM05D000566 ORTHO05D008456 1.0e-49 200.7 213 57.3
AUR62031167 Chenopodium quinoa HOM05D000566 ORTHO05D008456 4.4e-48 195.3 99 98.0
ATR0602G168 Amborella trichopoda HOM05D000566 ORTHO05D008456 1.6e-45 186.8 145 69.0
Glyma.13G170900 Glycine max HOM05D000566 ORTHO05D008456 2.0e-45 186.4 120 75.0
VMungo0251G1536 Vigna mungo HOM05D000566 ORTHO05D008456 3.2e-43 179.1 131 66.4
Glyma.04G136400 Glycine max HOM05D000566 ORTHO05D008456 3.6e-42 175.6 120 70.8
SEGI_28108 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 4.7e-42 175.3 127 66.1
arahy.Tifrunner.gnm1.ann1.AZL87G Arachis hypogaea HOM05D000566 ORTHO05D008456 6.8e-41 171.4 121 67.8
arahy.Tifrunner.gnm1.ann1.441UHN Arachis hypogaea HOM05D000566 ORTHO05D008456 1.5e-40 170.2 121 66.9
AagrBONN_evm.TU.Sc2ySwM_344.3192 Anthoceros agrestis HOM05D000566 ORTHO05D008456 9.8e-40 167.5 106 75.5
CsaV3_6G050800 Cucumis sativus L. HOM05D000566 ORTHO05D008456 6.1e-34 148.3 111 74.8
Nitab4.5_0010317g0010 Nicotiana tabacum HOM05D000566 ORTHO05D008456 7.5e-32 141.4 183 47.5
Cpa.g.sc7.62 Carica papaya HOM05D000566 ORTHO05D008456 1.7e-31 140.2 143 55.9
Nn1g04373 Nelumbo nucifera HOM05D000566 ORTHO05D008456 2.2e-31 139.8 127 62.2
MCO02G300 Micromonas commoda HOM05D000566 ORTHO05D008456 4.6e-29 132.1 124 54.8
FAN16G3553 Fragaria x ananassa HOM05D000566 ORTHO05D008456 7.8e-29 131.3 102 67.6
TWI38G1453 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 2.2e-23 113.2 67 83.6
PRCOL_00004523 Prasinoderma coloniale HOM05D000566 ORTHO05D008456 1.1e-22 110.9 125 48.0
TWI38G2220 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 3.3e-19 99.4 153 45.1
Glyma.04G136500 Glycine max HOM05D000566 ORTHO05D008456 2.1e-18 96.7 71 67.6
CSS0045665 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 4.9e-15 85.5 45 88.9
SEGI_06418 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 2.4e-14 83.2 108 48.1
SEGI_18524 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 5.4e-14 82.0 57 71.9
Sed0003601 Sechium edule HOM05D000566 ORTHO05D008456 7.1e-14 81.6 117 46.2
CSS0020746 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 6.0e-13 78.6 83 57.8
CSS0029795 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 6.0e-13 78.6 83 57.8
Cpa.g.sc7.61 Carica papaya HOM05D000566 ORTHO05D008456 6.6e-12 75.1 37 91.9
SEGI_34869 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 1.7e-07 60.5 42 64.3
MBI06_g25984_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 2.2e-07 60.1 52 59.6


User provided reference genes

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