Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.09g232960 Amaranthus hybridus HOM05D018558 ORTHO05D018254 1.9e-86 322.8 202 100.0
EL10Ac8g19799 Beta vulgaris HOM05D018558 ORTHO05D018254 2.1e-29 133.3 305 40.7
Ah.14g086770 Amaranthus hybridus HOM05D018558 ORTHO05D018254 4.6e-24 115.5 307 43.3
AUR62035804 Chenopodium quinoa HOM05D018558 ORTHO05D018254 6.2e-21 105.1 316 36.7
AUR62027551 Chenopodium quinoa HOM05D018558 ORTHO05D018254 1.3e-13 80.9 309 32.7
Ah.09g225810 Amaranthus hybridus HOM05D018558 ORTHO05D018254 9.0e-12 74.7 41 75.6
Lalb_Chr12g0204801 Lupinus albus HOM05D009013 ORTHO05D009761 5.5e-09 65.5 54 57.4
Cc00_g03210 Coffea canephora HOM05D012094 ORTHO05D009761 2.1e-08 63.5 46 54.3
Rhsim02G0193600 Rhododendron simsii HOM05D014645 ORTHO05D009761 3.5e-08 62.8 81 45.7
CiPaw.09G129900 Carya illinoinensis HOM05D009013 ORTHO05D009761 1.3e-07 60.8 42 61.9
Lalb_Chr07g0186121 Lupinus albus HOM05D009013 ORTHO05D009761 1.3e-07 60.8 44 59.1
Glyma.09G085700 Glycine max HOM05D009013 ORTHO05D009761 3.0e-07 59.7 98 40.8
Glyma.13G051300 Glycine max HOM05D009013 ORTHO05D009761 3.0e-07 59.7 53 54.7
Lalb_Chr23g0275971 Lupinus albus HOM05D009013 ORTHO05D009761 3.9e-07 59.3 71 43.7
arahy.Tifrunner.gnm1.ann1.3YWF5K Arachis hypogaea HOM05D009013 ORTHO05D009761 6.7e-07 58.5 81 40.7
arahy.Tifrunner.gnm1.ann1.5V604V Arachis hypogaea HOM05D009013 ORTHO05D009761 8.7e-07 58.2 81 40.7
Glyma.15G195700 Glycine max HOM05D009013 ORTHO05D009761 1.5e-06 57.4 89 40.4
Phvul.009G214600 Phaseolus vulgaris HOM05D009013 ORTHO05D009761 1.5e-06 57.4 122 36.1
Lj6g0000102 Lotus japonicus HOM05D009013 ORTHO05D009761 1.9e-06 57.0 96 38.5
Lalb_Chr13g0295461 Lupinus albus HOM05D009013 ORTHO05D009761 2.5e-06 56.6 44 54.5
CANSAT35G0309 Cannabis sativa HOM05D009013 ORTHO05D009761 4.3e-06 55.8 137 29.9
Gohir.D06G140600 Gossypium hirsutum HOM05D009852 ORTHO05D009761 5.7e-06 55.5 36 63.9
Hma1.2p1_0015F.1_g010420 Hydrangea macrophylla HOM05D009013 ORTHO05D009761 7.4e-06 55.1 80 38.8
Lalb_Chr08g0233301 Lupinus albus HOM05D009013 ORTHO05D009761 9.7e-06 54.7 278 26.3


User provided reference genes

Program Settings