Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.09g230900 Amaranthus hybridus HOM05D003644 ORTHO05D004305 9.6e-121 436.8 215 100.0
Hund09226 Selenicereus undatus HOM05D003644 ORTHO05D004305 1.3e-24 117.5 205 42.4
Manes.16G112500 Manihot esculenta HOM05D003644 ORTHO05D004305 1.1e-18 97.8 216 37.5
DCAR_012057 Daucus carota HOM05D003644 ORTHO05D004305 2.2e-16 90.1 224 36.6
GSVIVG01015346001 Vitis vinifera HOM05D003644 ORTHO05D004305 2.9e-16 89.7 219 36.1
Manes.03G024200 Manihot esculenta HOM05D003644 ORTHO05D004305 1.9e-15 87.0 220 35.9
AUR62010940 Chenopodium quinoa HOM05D003644 ORTHO05D004305 7.1e-15 85.1 214 36.0
Haze_25785 Corylus avellana HOM05D003644 ORTHO05D004305 7.1e-15 85.1 219 37.0
Duzib187G1156 Durio zibethinus HOM05D003644 ORTHO05D004305 1.6e-14 84.0 217 36.4
FAN19G0617 Fragaria x ananassa HOM05D003644 ORTHO05D004305 2.7e-14 83.2 202 38.6
Potri.018G084100 Populus trichocarpa HOM05D003644 ORTHO05D004305 3.5e-14 82.8 210 38.1
Hund09225 Selenicereus undatus HOM05D003644 ORTHO05D004305 4.6e-14 82.4 194 36.1
FvH4_1g05660 Fragaria vesca HOM05D003644 ORTHO05D004305 6.0e-14 82.0 202 38.6
MBI04_g14930_MAGBIO Magnolia biondii HOM05D003644 ORTHO05D004305 1.0e-13 81.3 221 34.4
Dinv41640 Davidia involucrata HOM05D003644 ORTHO05D004305 1.3e-13 80.9 179 37.4
CSS0010496 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 2.3e-13 80.1 215 34.4
CSS0033414 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 2.3e-13 80.1 215 34.4
Sc18g0001380 Simmondsia chinensis HOM05D003644 ORTHO05D004305 3.0e-13 79.7 194 36.1
CSS0008241 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 5.1e-13 79.0 218 32.6
FAN26G0903 Fragaria x ananassa HOM05D003644 ORTHO05D004305 5.1e-13 79.0 202 37.6
FAN26G3023 Fragaria x ananassa HOM05D003644 ORTHO05D004305 6.7e-13 78.6 202 37.6
PGR142G1369 Punica granatum HOM05D003644 ORTHO05D004305 1.1e-12 77.8 220 34.1
Duzib168G0231 Durio zibethinus HOM05D003644 ORTHO05D004305 3.3e-12 76.3 217 33.2
Oeu015581.1 Olea europaea HOM05D003644 ORTHO05D004305 3.3e-12 76.3 216 33.3
THA.LOC104814562 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 3.3e-12 76.3 199 37.2
Thecc.09G105500 Theobroma cacao HOM05D003644 ORTHO05D004305 4.3e-12 75.9 221 34.4
TWI34G1832 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 5.6e-12 75.5 194 34.0
FAN28G1311 Fragaria x ananassa HOM05D003644 ORTHO05D004305 7.4e-12 75.1 213 36.6
BcaNung01359 Brassica carinata HOM05D003644 ORTHO05D004305 1.3e-11 74.3 212 34.9
ClCG11G002330 Citrullus lanatus HOM05D003644 ORTHO05D004305 1.3e-11 74.3 195 35.9
Duzib150G1566 Durio zibethinus HOM05D003644 ORTHO05D004305 1.3e-11 74.3 218 32.1
FAN23G2152 Fragaria x ananassa HOM05D003644 ORTHO05D004305 1.3e-11 74.3 211 36.0
TAR636G2793 Trochodendron aralioides HOM05D003644 ORTHO05D004305 1.3e-11 74.3 221 35.3
Cpa.g.sc23.57 Carica papaya HOM05D003644 ORTHO05D004305 1.6e-11 73.9 219 35.6
Nn2g11654 Nelumbo nucifera HOM05D003644 ORTHO05D004305 2.1e-11 73.6 221 32.6
Sed0019018 Sechium edule HOM05D003644 ORTHO05D004305 2.1e-11 73.6 198 33.3
Sabra18G0072500 Salix brachista HOM05D003644 ORTHO05D004305 2.8e-11 73.2 232 34.1
A01p09070 Brassica napus HOM05D003644 ORTHO05D004305 3.6e-11 72.8 213 33.8
EL10Ac8g18428 Beta vulgaris HOM05D003644 ORTHO05D004305 4.8e-11 72.4 127 37.8
QL02p044635 Quercus lobata HOM05D003644 ORTHO05D004305 4.8e-11 72.4 194 37.1
CANSAT56G0200 Cannabis sativa HOM05D003644 ORTHO05D004305 6.2e-11 72.0 218 34.4
Ciclev10010512m.g Citrus clementina HOM05D003644 ORTHO05D004305 6.2e-11 72.0 224 34.8
Glyma.05G229100 Glycine max HOM05D003644 ORTHO05D004305 6.2e-11 72.0 219 32.4
Medtr6g088280 Medicago truncatula HOM05D003644 ORTHO05D004305 6.2e-11 72.0 218 32.6
TAR624G1421 Trochodendron aralioides HOM05D003644 ORTHO05D004305 8.1e-11 71.6 214 34.1
BcaC06g32601 Brassica carinata HOM05D003644 ORTHO05D004305 1.1e-10 71.2 215 34.4
Lj2g0017641 Lotus japonicus HOM05D003644 ORTHO05D004305 1.1e-10 71.2 167 36.5
C01p10620 Brassica napus HOM05D003644 ORTHO05D004305 1.4e-10 70.9 213 33.8
BraA01t00855Z Brassica rapa HOM05D003644 ORTHO05D004305 1.4e-10 70.9 213 33.8
VMungo0251G1747 Vigna mungo HOM05D003644 ORTHO05D004305 1.4e-10 70.9 218 33.5
ECA234G2378 Erigeron canadensis HOM05D003644 ORTHO05D004305 1.8e-10 70.5 221 31.7
RcHm_v2.0_Chr2g0091291 Rosa chinensis HOM05D003644 ORTHO05D004305 1.8e-10 70.5 178 38.2
SalBow6G0047 Salvia bowleyana HOM05D003644 ORTHO05D004305 1.8e-10 70.5 197 34.5
TPR.G34913 Trifolium pratense HOM05D003644 ORTHO05D004305 1.8e-10 70.5 222 32.9
BcaC09g51666 Brassica carinata HOM05D003644 ORTHO05D004305 2.4e-10 70.1 213 33.3
BolC1t01024H Brassica oleracea HOM05D003644 ORTHO05D004305 2.4e-10 70.1 213 33.3
Psat1g044920 Pisum sativum HOM05D003644 ORTHO05D004305 2.4e-10 70.1 220 33.2
BcaC07g41224 Brassica carinata HOM05D003644 ORTHO05D004305 3.1e-10 69.7 206 34.0
Gohir.D05G026700 Gossypium hirsutum HOM05D003644 ORTHO05D004305 3.1e-10 69.7 192 34.4
Sp3g33380 Schrenkiella parvula HOM05D003644 ORTHO05D004305 4.0e-10 69.3 205 34.1
Aa31LG2G21540 Aethionema arabicum HOM05D003644 ORTHO05D004305 5.3e-10 68.9 167 36.5
C08p42300 Brassica napus HOM05D003644 ORTHO05D004305 5.3e-10 68.9 206 32.5
BolC8t51790H Brassica oleracea HOM05D003644 ORTHO05D004305 5.3e-10 68.9 206 32.5
Carub.0007s1180 Capsella rubella HOM05D003644 ORTHO05D004305 5.3e-10 68.9 200 34.5
AT4G28840 Arabidopsis thaliana HOM05D003644 ORTHO05D004305 6.9e-10 68.6 201 35.3
PSO566G0277 Papaver somniferum HOM05D003644 ORTHO05D004305 9.0e-10 68.2 192 35.4
PSO782G2161 Papaver somniferum HOM05D003644 ORTHO05D004305 9.0e-10 68.2 191 35.1
Cc06_g10070 Coffea canephora HOM05D003644 ORTHO05D004305 2.0e-09 67.0 218 33.5
Phvul.002G311400 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 3.4e-09 66.2 218 32.1
A09p59020 Brassica napus HOM05D003644 ORTHO05D004305 4.5e-09 65.9 206 31.6
BraA09t41288Z Brassica rapa HOM05D003644 ORTHO05D004305 4.5e-09 65.9 206 31.6
MELO3C004570.2 Cucumis melo HOM05D003644 ORTHO05D004305 4.5e-09 65.9 195 34.4
CsaV3_2G002110 Cucumis sativus L. HOM05D003644 ORTHO05D004305 4.5e-09 65.9 200 34.5
Thhalv10002311m.g Eutrema salsugineum HOM05D003644 ORTHO05D004305 5.8e-09 65.5 203 36.5
Gorai.010G073900 Gossypium raimondii HOM05D003644 ORTHO05D004305 5.8e-09 65.5 218 33.5
A03p58450 Brassica napus HOM05D003644 ORTHO05D004305 7.6e-09 65.1 216 32.4
C07p56470 Brassica napus HOM05D003644 ORTHO05D004305 9.9e-09 64.7 215 32.1
BolC7t46126H Brassica oleracea HOM05D003644 ORTHO05D004305 9.9e-09 64.7 215 32.6
CiPaw.03G227900 Carya illinoinensis HOM05D003644 ORTHO05D004305 9.9e-09 64.7 219 33.8
Sp7g26840 Schrenkiella parvula HOM05D003644 ORTHO05D004305 9.9e-09 64.7 194 35.6
TWI32G0193 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 9.9e-09 64.7 191 32.5
Gohir.D06G063400 Gossypium hirsutum HOM05D003644 ORTHO05D004305 1.3e-08 64.3 219 34.2
Nn3g18137 Nelumbo nucifera HOM05D003644 ORTHO05D004305 1.7e-08 63.9 221 33.5
Peaxi162Scf00665g00003 Petunia axillaris HOM05D003644 ORTHO05D004305 1.7e-08 63.9 220 30.5
arahy.Tifrunner.gnm1.ann1.TDG8V6 Arachis hypogaea HOM05D003644 ORTHO05D004305 2.2e-08 63.5 160 36.9
arahy.Tifrunner.gnm1.ann1.X7P2RE Arachis hypogaea HOM05D003644 ORTHO05D004305 2.2e-08 63.5 158 37.3
Glyma.09G193400 Glycine max HOM05D003644 ORTHO05D004305 2.2e-08 63.5 148 38.5
Prupe.7G225200 Prunus persica HOM05D003644 ORTHO05D004305 2.2e-08 63.5 201 33.8
MD02G1057600 Malus domestica HOM05D003644 ORTHO05D004305 2.9e-08 63.2 197 32.5
Phvul.004G168350 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 2.9e-08 63.2 179 35.8
THA.LOC104804017 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 2.9e-08 63.2 194 34.0
VMungo0464G0020 Vigna mungo HOM05D003644 ORTHO05D004305 2.9e-08 63.2 193 35.8
Sed0028016 Sechium edule HOM05D003644 ORTHO05D004305 3.8e-08 62.8 220 28.2
PGSC0003DMG400003139 Solanum tuberosum HOM05D003644 ORTHO05D004305 3.8e-08 62.8 213 33.8
Gorai.001G007300 Gossypium raimondii HOM05D003644 ORTHO05D004305 4.9e-08 62.4 216 32.4
Gorai.009G026800 Gossypium raimondii HOM05D003644 ORTHO05D004305 4.9e-08 62.4 200 33.0
Atru.chr7.1390 Acer truncatum HOM05D003644 ORTHO05D004305 6.4e-08 62.0 203 32.0
Glyma.08G036100 Glycine max HOM05D003644 ORTHO05D004305 8.4e-08 61.6 216 31.9
Peaxi162Scf00231g00061 Petunia axillaris HOM05D003644 ORTHO05D004305 1.1e-07 61.2 215 32.1
ClCG06G008860 Citrullus lanatus HOM05D003644 ORTHO05D004305 1.4e-07 60.8 197 32.0
Oeu002262.2 Olea europaea HOM05D003644 ORTHO05D004305 1.4e-07 60.8 210 30.0
Sopen12g003210 Solanum pennellii HOM05D003644 ORTHO05D004305 1.4e-07 60.8 196 29.1
MSTRG.19571 Avicennia marina HOM05D003644 ORTHO05D004305 1.9e-07 60.5 195 30.3
MSTRG.6013 Avicennia marina HOM05D003644 ORTHO05D004305 1.9e-07 60.5 226 31.4
MELO3C024703.2 Cucumis melo HOM05D003644 ORTHO05D004305 2.4e-07 60.1 197 32.0
Glyma.01G145600 Glycine max HOM05D003644 ORTHO05D004305 4.2e-07 59.3 125 40.0
Hund26238 Selenicereus undatus HOM05D003644 ORTHO05D004305 4.2e-07 59.3 215 29.8
Sc08g0007690 Simmondsia chinensis HOM05D003644 ORTHO05D004305 5.5e-07 58.9 200 31.0
PGSC0003DMG400000374 Solanum tuberosum HOM05D003644 ORTHO05D004305 5.5e-07 58.9 196 30.1
arahy.Tifrunner.gnm1.ann1.XM0XDL Arachis hypogaea HOM05D003644 ORTHO05D004305 7.1e-07 58.5 192 28.6
Lsat_1_v5_gn_8_96040 Lactuca sativa HOM05D003644 ORTHO05D004305 7.1e-07 58.5 187 36.4
AL3G48010 Arabidopsis lyrata HOM05D003644 ORTHO05D004305 1.2e-06 57.8 200 30.0
CsaV3_1G021830 Cucumis sativus L. HOM05D003644 ORTHO05D004305 1.6e-06 57.4 197 28.9
Gohir.A05G025200 Gossypium hirsutum HOM05D003644 ORTHO05D004305 2.1e-06 57.0 192 32.8
Potri.006G161100 Populus trichocarpa HOM05D003644 ORTHO05D004305 2.1e-06 57.0 89 43.8
Gohir.A07G004600 Gossypium hirsutum HOM05D003644 ORTHO05D004305 3.5e-06 56.2 202 32.7
CAN.G1774.6 Capsicum annuum HOM05D003644 ORTHO05D004305 4.6e-06 55.8 196 28.6
Gohir.D07G007600 Gossypium hirsutum HOM05D003644 ORTHO05D004305 4.6e-06 55.8 216 31.9
Aqoxy7G01525 Aquilegia oxysepala HOM05D003644 ORTHO05D004305 7.9e-06 55.1 128 35.2
C09p15050 Brassica napus HOM05D003644 ORTHO05D004305 7.9e-06 55.1 104 40.4
COL.COLO4_34805 Corchorus olitorius HOM05D003644 ORTHO05D004305 7.9e-06 55.1 193 29.5


User provided reference genes

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