Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.09g230500 Amaranthus hybridus HOM05D007850 ORTHO05D009594 3.4e-39 164.5 79 100.0
AUR62010878 Chenopodium quinoa HOM05D007850 ORTHO05D009594 4.3e-18 94.4 77 62.3
AUR62021391 Chenopodium quinoa HOM05D007850 ORTHO05D009594 9.6e-18 93.2 78 62.8
EL10Ac8g18368 Beta vulgaris HOM05D007850 ORTHO05D009594 1.4e-16 89.4 78 62.8
Sc18g0001560 Simmondsia chinensis HOM05D007850 ORTHO05D009594 3.2e-13 78.2 75 60.0
Rhsim05G0038300 Rhododendron simsii HOM05D007850 ORTHO05D009594 1.2e-12 76.3 77 53.2
Nitab4.5_0000566g0200 Nicotiana tabacum HOM05D007850 ORTHO05D009594 7.9e-12 73.6 77 50.6
Nn8g39046 Nelumbo nucifera HOM05D007850 ORTHO05D009594 3.9e-11 71.2 79 53.2
Eucgr.K01055 Eucalyptus grandis HOM05D007850 ORTHO05D009594 6.7e-11 70.5 57 64.9
Lj2g0008653 Lotus japonicus HOM05D007850 ORTHO05D009594 6.7e-11 70.5 58 60.3
arahy.Tifrunner.gnm1.ann1.X02Y3Q Arachis hypogaea HOM05D007850 ORTHO05D009594 1.1e-10 69.7 71 53.5
Nitab4.5_0003079g0010 Nicotiana tabacum HOM05D007850 ORTHO05D009594 1.9e-10 68.9 77 48.1
Cc06_g10600 Coffea canephora HOM05D007850 ORTHO05D009594 2.5e-10 68.6 72 52.8
Solyc12g008560.1 Solanum lycopersicum HOM05D007850 ORTHO05D009594 3.3e-10 68.2 77 48.1
FAN23G2338 Fragaria x ananassa HOM05D007850 ORTHO05D009594 5.6e-10 67.4 77 48.1
FAN26G0602 Fragaria x ananassa HOM05D007850 ORTHO05D009594 5.6e-10 67.4 77 48.1
FAN26G2005 Fragaria x ananassa HOM05D007850 ORTHO05D009594 5.6e-10 67.4 77 48.1
Peaxi162Scf00944g00009 Petunia axillaris HOM05D007850 ORTHO05D009594 5.6e-10 67.4 77 50.6
FAN28G1089 Fragaria x ananassa HOM05D007850 ORTHO05D009594 7.4e-10 67.0 77 48.1
Glyma.01G006200 Glycine max HOM05D007850 ORTHO05D009594 7.4e-10 67.0 73 52.1
Phvul.004G174800 Phaseolus vulgaris HOM05D007850 ORTHO05D009594 7.4e-10 67.0 71 54.9
Cfa003164 Carpinus fangiana HOM05D007850 ORTHO05D009594 9.6e-10 66.6 83 50.6
PGSC0003DMG400000292 Solanum tuberosum HOM05D007850 ORTHO05D009594 9.6e-10 66.6 77 46.8
FvH4_1g06390 Fragaria vesca HOM05D007850 ORTHO05D009594 1.3e-09 66.2 77 46.8
FAN19G1200 Fragaria x ananassa HOM05D007850 ORTHO05D009594 1.3e-09 66.2 77 46.8
Glyma.07G125500 Glycine max HOM05D007850 ORTHO05D009594 1.3e-09 66.2 71 50.7
Gohir.A08G243300 Gossypium hirsutum HOM05D007850 ORTHO05D009594 1.6e-09 65.9 74 50.0
arahy.Tifrunner.gnm1.ann1.X1KXE8 Arachis hypogaea HOM05D012186 ORTHO05D009594 2.8e-09 65.1 71 52.1
ClCG03G016060 Citrullus lanatus HOM05D007850 ORTHO05D009594 2.8e-09 65.1 63 55.6
Haze_25835 Corylus avellana HOM05D007850 ORTHO05D009594 3.7e-09 64.7 83 49.4
DCAR_000091 Daucus carota HOM05D007850 ORTHO05D009594 3.7e-09 64.7 75 49.3
DCAR_012032 Daucus carota HOM05D007850 ORTHO05D009594 3.7e-09 64.7 75 49.3
Prupe.7G218200 Prunus persica HOM05D007850 ORTHO05D009594 3.7e-09 64.7 51 62.7
DCAR_012035 Daucus carota HOM05D007850 ORTHO05D009594 4.8e-09 64.3 75 49.3
RcHm_v2.0_Chr2g0092131 Rosa chinensis HOM05D007850 ORTHO05D009594 4.8e-09 64.3 77 45.5
TPR.G33528 Trifolium pratense HOM05D007850 ORTHO05D009594 4.8e-09 64.3 78 47.4
Cpa.g.sc78.26 Carica papaya HOM05D007850 ORTHO05D009594 6.2e-09 63.9 79 48.1
Gohir.D08G264200 Gossypium hirsutum HOM05D007850 ORTHO05D009594 8.1e-09 63.5 74 48.6
Gorai.004G282100 Gossypium raimondii HOM05D007850 ORTHO05D009594 8.1e-09 63.5 74 48.6
Manes.03G028100 Manihot esculenta HOM05D007850 ORTHO05D009594 8.1e-09 63.5 83 47.0
Hma1.2p1_0208F.1_g088080 Hydrangea macrophylla HOM05D007850 ORTHO05D009594 1.1e-08 63.2 80 48.8
MELO3C015421.2 Cucumis melo HOM05D007850 ORTHO05D009594 1.4e-08 62.8 70 50.0
Medtr6g090490 Medicago truncatula HOM05D007850 ORTHO05D009594 1.4e-08 62.8 77 49.4
Gohir.D06G066600 Gossypium hirsutum HOM05D007850 ORTHO05D009594 1.8e-08 62.4 52 61.5
TAR624G0098 Trochodendron aralioides HOM05D007850 ORTHO05D009594 1.8e-08 62.4 77 48.1
Actinidia17514 Actinidia chinensis HOM05D007850 ORTHO05D009594 4.0e-08 61.2 64 51.6
Ciclev10010071m.g Citrus clementina HOM05D007850 ORTHO05D009594 4.0e-08 61.2 78 48.7
Gohir.A06G068000 Gossypium hirsutum HOM05D007850 ORTHO05D009594 4.0e-08 61.2 60 60.0
ATR0705G131 Amborella trichopoda HOM05D007850 ORTHO05D009594 5.3e-08 60.8 55 52.7
CANSAT56G2953 Cannabis sativa HOM05D007850 ORTHO05D009594 5.3e-08 60.8 77 46.8
Duzib168G0149 Durio zibethinus HOM05D007850 ORTHO05D009594 5.3e-08 60.8 75 49.3
Potri.015G106700 Populus trichocarpa HOM05D007850 ORTHO05D009594 5.3e-08 60.8 61 54.1
Sed0003200 Sechium edule HOM05D007850 ORTHO05D009594 5.3e-08 60.8 67 49.3
Lalb_Chr22g0352511 Lupinus albus HOM05D007850 ORTHO05D009594 6.9e-08 60.5 57 57.9
Sabra12G0079700 Salix brachista HOM05D007850 ORTHO05D009594 6.9e-08 60.5 71 47.9
SalBow6G1226 Salvia bowleyana HOM05D007850 ORTHO05D009594 6.9e-08 60.5 76 48.7
Gorai.010G078100 Gossypium raimondii HOM05D007850 ORTHO05D009594 9.0e-08 60.1 52 59.6
QL08p048105 Quercus lobata HOM05D007850 ORTHO05D009594 9.0e-08 60.1 75 49.3
CAN.G1591.18 Capsicum annuum HOM05D007850 ORTHO05D009594 1.2e-07 59.7 78 43.6
CAN.G2021.4 Capsicum annuum HOM05D007850 ORTHO05D009594 1.2e-07 59.7 78 43.6
CSS0000041 Camellia sinensis var. sinensis HOM05D007850 ORTHO05D009594 1.5e-07 59.3 71 47.9
Gohir.A07G009000 Gossypium hirsutum HOM05D007850 ORTHO05D009594 2.6e-07 58.5 75 46.7
Gohir.D07G009300 Gossypium hirsutum HOM05D007850 ORTHO05D009594 2.6e-07 58.5 75 46.7
Gorai.001G009500 Gossypium raimondii HOM05D007850 ORTHO05D009594 2.6e-07 58.5 75 46.7
Ca_25585_v3 Cicer arietinum L. HOM05D007850 ORTHO05D009594 4.5e-07 57.8 76 48.7
Psat1g048160 Pisum sativum HOM05D007850 ORTHO05D009594 4.5e-07 57.8 78 46.2
Thecc.09G099000 Theobroma cacao HOM05D007850 ORTHO05D009594 4.5e-07 57.8 52 57.7
Ciclev10006350m.g Citrus clementina HOM05D007850 ORTHO05D009594 5.8e-07 57.4 77 46.8
SEGI_13362 Sequoiadendron giganteum HOM05D007850 ORTHO05D009594 5.8e-07 57.4 52 55.8
Sopen12g003500 Solanum pennellii HOM05D007850 ORTHO05D009594 5.8e-07 57.4 70 48.6
CAN.G1677.12 Capsicum annuum HOM05D007850 ORTHO05D009594 7.6e-07 57.0 78 42.3
QL03p050300 Quercus lobata HOM05D007850 ORTHO05D009594 1.3e-06 56.2 65 49.2
CAN.G1357.32 Capsicum annuum HOM05D007850 ORTHO05D009594 1.7e-06 55.8 78 42.3
Lsat_1_v5_gn_7_39541 Lactuca sativa HOM05D007850 ORTHO05D009594 4.9e-06 54.3 30 80.0
CAN.G1349.15 Capsicum annuum HOM05D007850 ORTHO05D009594 6.4e-06 53.9 78 41.0
Aqoxy7G01385 Aquilegia oxysepala HOM05D007850 ORTHO05D009594 8.4e-06 53.5 73 45.2


User provided reference genes

Program Settings