Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.09g230490 Amaranthus hybridus HOM05D004751 ORTHO05D005819 1.3e-47 192.6 91 100.0
EL10Ac8g18369 Beta vulgaris HOM05D004751 ORTHO05D005819 3.6e-45 184.5 91 94.5
Hund26286 Selenicereus undatus HOM05D004751 ORTHO05D005819 3.6e-45 184.5 91 95.6
AUR62021393 Chenopodium quinoa HOM05D004751 ORTHO05D005819 1.8e-44 182.2 91 94.5
AUR62010880 Chenopodium quinoa HOM05D004751 ORTHO05D005819 2.4e-44 181.8 91 93.4
COL.COLO4_34727 Corchorus olitorius HOM05D004751 ORTHO05D005819 2.6e-43 178.3 91 90.1
Gohir.A05G026300 Gossypium hirsutum HOM05D004751 ORTHO05D005819 4.5e-43 177.6 91 90.1
Gohir.D05G027800 Gossypium hirsutum HOM05D004751 ORTHO05D005819 4.5e-43 177.6 91 90.1
Gorai.009G028000 Gossypium raimondii HOM05D004751 ORTHO05D005819 4.5e-43 177.6 91 90.1
Sc08g0008060 Simmondsia chinensis HOM05D004751 ORTHO05D005819 4.5e-43 177.6 91 91.2
Atru.chr7.1477 Acer truncatum HOM05D004751 ORTHO05D005819 7.6e-43 176.8 91 89.0
Duzib150G1241 Durio zibethinus HOM05D004751 ORTHO05D005819 1.3e-42 176.0 91 89.0
Prupe.2G065200 Prunus persica HOM05D004751 ORTHO05D005819 1.3e-42 176.0 91 87.9
Aa31LG2G21070 Aethionema arabicum HOM05D004751 ORTHO05D005819 2.2e-42 175.3 91 90.1
Ciclev10007242m.g Citrus clementina HOM05D004751 ORTHO05D005819 2.2e-42 175.3 91 90.1
FvH4_7g05110 Fragaria vesca HOM05D004751 ORTHO05D005819 2.2e-42 175.3 91 86.8
FAN01G0060 Fragaria x ananassa HOM05D004751 ORTHO05D005819 2.2e-42 175.3 91 86.8
FAN03G2869 Fragaria x ananassa HOM05D004751 ORTHO05D005819 2.2e-42 175.3 91 86.8
FAN06G4551 Fragaria x ananassa HOM05D004751 ORTHO05D005819 2.2e-42 175.3 91 86.8
RcHm_v2.0_Chr1g0331571 Rosa chinensis HOM05D004751 ORTHO05D005819 2.2e-42 175.3 91 86.8
MD07G1058300 Malus domestica HOM05D004751 ORTHO05D005819 4.9e-42 174.1 91 86.8
Dinv42256 Davidia involucrata HOM05D004751 ORTHO05D005819 6.4e-42 173.7 91 89.0
Thecc.09G099100 Theobroma cacao HOM05D004751 ORTHO05D005819 6.4e-42 173.7 91 87.9
BcaC09g51723 Brassica carinata HOM05D004751 ORTHO05D005819 8.4e-42 173.3 91 89.0
A01p08650 Brassica napus HOM05D004751 ORTHO05D005819 8.4e-42 173.3 91 89.0
C01p10120 Brassica napus HOM05D004751 ORTHO05D005819 8.4e-42 173.3 91 89.0
BolC1t00970H Brassica oleracea HOM05D004751 ORTHO05D005819 8.4e-42 173.3 91 89.0
BraA01t00815Z Brassica rapa HOM05D004751 ORTHO05D005819 8.4e-42 173.3 91 89.0
Sp7g27250 Schrenkiella parvula HOM05D004751 ORTHO05D005819 1.1e-41 172.9 91 89.0
THA.LOC104814595 Tarenaya hassleriana HOM05D004751 ORTHO05D005819 1.1e-41 172.9 91 87.9
TAR383G0360 Trochodendron aralioides HOM05D004751 ORTHO05D005819 1.1e-41 172.9 91 86.8
CANSAT56G3494 Cannabis sativa HOM05D004751 ORTHO05D005819 3.2e-41 171.4 91 86.8
Dinv36675 Davidia involucrata HOM05D004751 ORTHO05D005819 3.2e-41 171.4 91 89.0
MBI15_g07764_MAGBIO Magnolia biondii HOM05D004751 ORTHO05D005819 4.2e-41 171.0 91 85.7
TAR626G1784 Trochodendron aralioides HOM05D004751 ORTHO05D005819 4.2e-41 171.0 91 84.6
TAR639G0003 Trochodendron aralioides HOM05D004751 ORTHO05D005819 4.2e-41 171.0 91 84.6
GSVIVG01015287001 Vitis vinifera HOM05D004751 ORTHO05D005819 4.2e-41 171.0 91 86.8
PSO210G3406 Papaver somniferum HOM05D004751 ORTHO05D005819 5.4e-41 170.6 91 85.7
Hund09091 Selenicereus undatus HOM05D004751 ORTHO05D005819 5.4e-41 170.6 91 87.9
ATR0730G043 Amborella trichopoda HOM05D004751 ORTHO05D005819 9.3e-41 169.9 91 85.7
Potri.006G153100 Populus trichocarpa HOM05D004751 ORTHO05D005819 9.3e-41 169.9 91 84.6
Cfa003165 Carpinus fangiana HOM05D004751 ORTHO05D005819 1.2e-40 169.5 91 85.7
Haze_25834 Corylus avellana HOM05D004751 ORTHO05D005819 1.2e-40 169.5 91 85.7
Thhalv10024212m.g Eutrema salsugineum HOM05D004751 ORTHO05D005819 1.2e-40 169.5 91 87.9
PGR102G2506 Punica granatum HOM05D004751 ORTHO05D005819 1.2e-40 169.5 91 84.6
Sabra06G0121300 Salix brachista HOM05D004751 ORTHO05D005819 1.2e-40 169.5 91 84.6
MSTRG.26388 Avicennia marina HOM05D004751 ORTHO05D005819 1.6e-40 169.1 91 85.7
Oeu021455.1 Olea europaea HOM05D004751 ORTHO05D005819 2.1e-40 168.7 91 86.8
Aqoxy7G03607 Aquilegia oxysepala HOM05D004751 ORTHO05D005819 3.5e-40 167.9 91 85.7
Oeu018580.2 Olea europaea HOM05D004751 ORTHO05D005819 3.5e-40 167.9 91 86.8
PSO210G2464 Papaver somniferum HOM05D004751 ORTHO05D005819 3.5e-40 167.9 91 84.6
AT4G29380 Arabidopsis thaliana HOM05D004751 ORTHO05D005819 4.6e-40 167.5 91 85.7
CSS0000434 Camellia sinensis var. sinensis HOM05D004751 ORTHO05D005819 4.6e-40 167.5 91 85.7
CSS0026223 Camellia sinensis var. sinensis HOM05D004751 ORTHO05D005819 4.6e-40 167.5 91 85.7
CiPaw.03G223200 Carya illinoinensis HOM05D004751 ORTHO05D005819 6.0e-40 167.2 91 83.5
Manes.16G108000 Manihot esculenta HOM05D004751 ORTHO05D005819 6.0e-40 167.2 91 84.6
arahy.Tifrunner.gnm1.ann1.11NKIJ Arachis hypogaea HOM05D004751 ORTHO05D005819 7.9e-40 166.8 92 87.0
Sed0000923 Sechium edule HOM05D004751 ORTHO05D005819 7.9e-40 166.8 91 84.6
Actinidia17515 Actinidia chinensis HOM05D004751 ORTHO05D005819 1.0e-39 166.4 91 84.6
CAN.G787.12 Capsicum annuum HOM05D004751 ORTHO05D005819 1.0e-39 166.4 91 86.8
Hma1.2p1_0012F.1_g007400 Hydrangea macrophylla HOM05D004751 ORTHO05D005819 1.0e-39 166.4 91 85.7
MD02G1262100 Malus domestica HOM05D004751 ORTHO05D005819 1.0e-39 166.4 91 84.6
Cpa.g.sc78.25 Carica papaya HOM05D004751 ORTHO05D005819 1.3e-39 166.0 91 85.7
Migut.K00548 Erythranthe guttata HOM05D004751 ORTHO05D005819 1.3e-39 166.0 91 85.7
Nitab4.5_0004673g0040 Nicotiana tabacum HOM05D004751 ORTHO05D005819 1.3e-39 166.0 91 85.7
AL7G23020 Arabidopsis lyrata HOM05D004751 ORTHO05D005819 1.8e-39 165.6 91 84.6
Cc06_g10590 Coffea canephora HOM05D004751 ORTHO05D005819 1.8e-39 165.6 91 84.6
QL02p040907 Quercus lobata HOM05D004751 ORTHO05D005819 1.8e-39 165.6 91 83.5
DCAR_028653 Daucus carota HOM05D004751 ORTHO05D005819 2.3e-39 165.2 91 84.6
Solyc04g012170.4 Solanum lycopersicum HOM05D004751 ORTHO05D005819 2.3e-39 165.2 91 85.7
Sopen04g006260 Solanum pennellii HOM05D004751 ORTHO05D005819 2.3e-39 165.2 91 85.7
PGSC0003DMG400023589 Solanum tuberosum HOM05D004751 ORTHO05D005819 2.3e-39 165.2 91 85.7
TWI32G0016 Tripterygium wilfordii HOM05D004751 ORTHO05D005819 2.3e-39 165.2 91 82.4
HanXRQChr03g0061061 Helianthus annuus HOM05D004751 ORTHO05D005819 3.0e-39 164.9 91 85.7
Carub.0007s1117 Capsella rubella HOM05D004751 ORTHO05D005819 5.1e-39 164.1 91 84.6
SalBow1G2004 Salvia bowleyana HOM05D004751 ORTHO05D005819 6.7e-39 163.7 91 84.6
Psat1g048040 Pisum sativum HOM05D004751 ORTHO05D005819 1.1e-38 162.9 91 82.4
ClCG03G016070 Citrullus lanatus HOM05D004751 ORTHO05D005819 1.9e-38 162.2 91 82.4
Rhsim05G0038900 Rhododendron simsii HOM05D004751 ORTHO05D005819 1.9e-38 162.2 91 83.5
TWI34G0109 Tripterygium wilfordii HOM05D004751 ORTHO05D005819 1.9e-38 162.2 91 81.3
unitig_8.g4485 Utricularia gibba HOM05D004751 ORTHO05D005819 1.9e-38 162.2 91 83.5
Lsat_1_v5_gn_7_39580 Lactuca sativa HOM05D004751 ORTHO05D005819 3.3e-38 161.4 91 83.5
Lj7C667T4 Lonicera japonica HOM05D004751 ORTHO05D005819 3.3e-38 161.4 92 84.8
VMungo0464G0426 Vigna mungo HOM05D004751 ORTHO05D005819 3.3e-38 161.4 91 82.4
SGA_v2.0_scaffold19G08722 Striga asiatica HOM05D004751 ORTHO05D005819 5.6e-38 160.6 91 82.4
TPR.G31000 Trifolium pratense HOM05D004751 ORTHO05D005819 5.6e-38 160.6 91 81.3
Medtr6g088835 Medicago truncatula HOM05D004751 ORTHO05D005819 1.6e-37 159.1 91 80.2
Lalb_Chr14g0371941 Lupinus albus HOM05D004751 ORTHO05D005819 2.1e-37 158.7 91 81.3
Peaxi162Scf01157g00011 Petunia axillaris HOM05D004751 ORTHO05D005819 2.1e-37 158.7 91 81.3
Phvul.004G175100 Phaseolus vulgaris HOM05D004751 ORTHO05D005819 2.1e-37 158.7 91 80.2
MELO3C015420.2 Cucumis melo HOM05D004751 ORTHO05D005819 2.8e-37 158.3 91 80.2
CsaV3_1G039890 Cucumis sativus L. HOM05D004751 ORTHO05D005819 2.8e-37 158.3 91 80.2
Glyma.01G006600 Glycine max HOM05D004751 ORTHO05D005819 2.8e-37 158.3 91 80.2
Glyma.07G125200 Glycine max HOM05D004751 ORTHO05D005819 2.8e-37 158.3 91 80.2
Pp3c9_3860 Physcomitrium patens HOM05D004751 ORTHO05D005819 2.8e-37 158.3 91 79.1
vmacro10847 Vaccinium macrocarpon HOM05D004751 ORTHO05D005819 2.8e-37 158.3 91 81.3
Lj2g0020264 Lotus japonicus HOM05D004751 ORTHO05D005819 8.1e-37 156.8 91 78.0
Pp3c15_10000 Physcomitrium patens HOM05D004751 ORTHO05D005819 2.4e-36 155.2 91 78.0
SHI02646 Sapria himalayana HOM05D004751 ORTHO05D005819 5.3e-36 154.1 80 88.8
CDE04G0916 Ceratophyllum demersum HOM05D004751 ORTHO05D005819 9.0e-36 153.3 91 76.9
arahy.Tifrunner.gnm1.ann1.9BR2YY Arachis hypogaea HOM05D004751 ORTHO05D005819 1.2e-35 152.9 91 78.0
arahy.Tifrunner.gnm1.ann1.YRLX64 Arachis hypogaea HOM05D004751 ORTHO05D005819 1.2e-35 152.9 91 78.0
Ca_25582_v3 Cicer arietinum L. HOM05D004751 ORTHO05D005819 3.4e-35 151.4 88 79.5
Zm00001eb257890 Zea mays HOM05D004751 ORTHO05D005819 2.2e-34 148.7 92 76.1
Zm00001eb192340 Zea mays HOM05D004751 ORTHO05D005819 1.1e-33 146.4 92 75.0
SMO347G0104 Selaginella moellendorffii HOM05D004751 ORTHO05D005819 1.9e-33 145.6 92 72.8
SEGI_14388 Sequoiadendron giganteum HOM05D004751 ORTHO05D005819 3.2e-33 144.8 92 75.0
AagrBONN_evm.TU.Sc2ySwM_228.4976 Anthoceros agrestis HOM05D004751 ORTHO05D005819 9.6e-30 133.3 91 64.8
CBR_g47981 Chara braunii HOM05D004751 ORTHO05D005819 4.5e-27 124.4 91 61.5
Mapoly0002s0158 Marchantia polymorpha HOM05D004751 ORTHO05D005819 5.1e-23 110.9 92 53.3
Ca_25584_v3 Cicer arietinum L. HOM05D004751 ORTHO05D005819 4.8e-21 104.4 56 87.5
BcaB08g34921 Brassica carinata HOM05D004751 ORTHO05D005819 1.6e-16 89.4 51 78.4
ECA240G2374 Erigeron canadensis HOM05D004751 ORTHO05D005819 3.9e-15 84.7 48 77.1
CiPaw.04G155500 Carya illinoinensis HOM05D004751 ORTHO05D005819 4.5e-11 71.2 59 57.6
MCO11G423 Micromonas commoda HOM05D004751 ORTHO05D005819 1.4e-09 66.2 104 40.4
Cre06.g290500 Chlamydomonas reinhardtii HOM05D004751 ORTHO05D005819 4.7e-08 61.2 91 39.6


User provided reference genes

Program Settings