Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.09g229650 Amaranthus hybridus HOM05D006491 ORTHO05D008412 6.5e-224 780.4 393 100.0
EL10Ac8g18256 Beta vulgaris HOM05D006491 ORTHO05D008412 9.5e-159 563.9 388 74.2
AUR62039980 Chenopodium quinoa HOM05D006491 ORTHO05D008412 2.2e-139 499.6 352 71.6
AUR62040289 Chenopodium quinoa HOM05D006491 ORTHO05D008412 3.2e-138 495.7 352 71.3
Sc14g0001140 Simmondsia chinensis HOM05D006491 ORTHO05D008412 5.5e-130 468.4 354 65.8
Potri.018G096900 Populus trichocarpa HOM05D006491 ORTHO05D008412 9.3e-130 467.6 394 62.9
Manes.14G150100 Manihot esculenta HOM05D006491 ORTHO05D008412 2.5e-127 459.5 389 60.2
Sabra18G0084000 Salix brachista HOM05D006491 ORTHO05D008412 1.3e-126 457.2 393 60.3
CiPaw.07G187800 Carya illinoinensis HOM05D006491 ORTHO05D008412 1.8e-125 453.4 381 61.4
Aqoxy7G03183 Aquilegia oxysepala HOM05D006491 ORTHO05D008412 5.3e-125 451.8 388 62.1
GSVIVG01029103001 Vitis vinifera HOM05D006491 ORTHO05D008412 9.0e-125 451.1 381 61.4
Dinv41291 Davidia involucrata HOM05D006491 ORTHO05D008412 1.2e-124 450.7 384 63.0
arahy.Tifrunner.gnm1.ann1.E3AGAX Arachis hypogaea HOM05D006491 ORTHO05D008412 1.5e-124 450.3 383 60.8
Hund26385 Selenicereus undatus HOM05D006491 ORTHO05D008412 2.0e-124 449.9 386 63.5
arahy.Tifrunner.gnm1.ann1.1P8XK5 Arachis hypogaea HOM05D006491 ORTHO05D008412 2.6e-124 449.5 385 60.3
Duzib150G0568 Durio zibethinus HOM05D006491 ORTHO05D008412 1.7e-123 446.8 380 61.1
Prupe.1G095000 Prunus persica HOM05D006491 ORTHO05D008412 2.2e-123 446.4 387 59.4
QL02p096111 Quercus lobata HOM05D006491 ORTHO05D008412 4.9e-123 445.3 360 62.2
MD13G1262500 Malus domestica HOM05D006491 ORTHO05D008412 9.3e-122 441.0 389 59.6
Nn2g14424 Nelumbo nucifera HOM05D006491 ORTHO05D008412 9.3e-122 441.0 387 57.6
TAR383G0527 Trochodendron aralioides HOM05D006491 ORTHO05D008412 9.3e-122 441.0 385 59.7
TWI63G0546 Tripterygium wilfordii HOM05D006491 ORTHO05D008412 2.7e-121 439.5 378 61.6
COL.COLO4_16079 Corchorus olitorius HOM05D006491 ORTHO05D008412 3.5e-121 439.1 392 58.4
RcHm_v2.0_Chr4g0404161 Rosa chinensis HOM05D006491 ORTHO05D008412 1.0e-120 437.6 359 62.1
Lalb_Chr13g0300441 Lupinus albus HOM05D006491 ORTHO05D008412 1.8e-120 436.8 395 58.2
Ca_21191_v3 Cicer arietinum L. HOM05D006491 ORTHO05D008412 5.1e-120 435.3 390 59.5
Gohir.D08G096700 Gossypium hirsutum HOM05D006491 ORTHO05D008412 5.1e-120 435.3 387 58.9
Gorai.004G103700 Gossypium raimondii HOM05D006491 ORTHO05D008412 6.7e-120 434.9 387 58.9
MBI14_g24284_MAGBIO Magnolia biondii HOM05D006491 ORTHO05D008412 6.7e-120 434.9 389 58.1
Phvul.003G149900 Phaseolus vulgaris HOM05D006491 ORTHO05D008412 1.1e-119 434.1 386 60.1
FAN22G1104 Fragaria x ananassa HOM05D006491 ORTHO05D008412 1.5e-119 433.7 387 58.4
CSS0049223 Camellia sinensis var. sinensis HOM05D006491 ORTHO05D008412 2.5e-119 433.0 384 60.4
VMungo1215G2097 Vigna mungo HOM05D006491 ORTHO05D008412 4.3e-119 432.2 374 62.6
TPR.G5304 Trifolium pratense HOM05D006491 ORTHO05D008412 5.7e-119 431.8 392 58.4
Haze_22140 Corylus avellana HOM05D006491 ORTHO05D008412 2.8e-118 429.5 361 61.2
FAN12G3371 Fragaria x ananassa HOM05D006491 ORTHO05D008412 6.3e-118 428.3 387 58.4
Medtr4g129150 Medicago truncatula HOM05D006491 ORTHO05D008412 1.1e-117 427.6 393 59.3
Psat4g010880 Pisum sativum HOM05D006491 ORTHO05D008412 1.1e-117 427.6 387 57.1
Ciclev10008637m.g Citrus clementina HOM05D006491 ORTHO05D008412 1.4e-117 427.2 378 60.1
PSO063G6711 Papaver somniferum HOM05D006491 ORTHO05D008412 4.5e-116 422.2 360 58.9
Lj4g0007651 Lotus japonicus HOM05D006491 ORTHO05D008412 2.2e-115 419.9 368 58.7
Actinidia17330 Actinidia chinensis HOM05D006491 ORTHO05D008412 2.9e-115 419.5 384 59.6
Cpa.g.sc450.5 Carica papaya HOM05D006491 ORTHO05D008412 5.0e-115 418.7 397 56.4
PGR142G3664 Punica granatum HOM05D006491 ORTHO05D008412 4.2e-114 415.6 363 59.8
CANSAT11G0137 Cannabis sativa HOM05D006491 ORTHO05D008412 5.5e-114 415.2 380 56.6
HanXRQChr05g0136551 Helianthus annuus HOM05D006491 ORTHO05D008412 5.5e-114 415.2 363 60.6
Gohir.A08G070300 Gossypium hirsutum HOM05D006491 ORTHO05D008412 7.2e-114 414.8 388 57.0
PSO782G2884 Papaver somniferum HOM05D006491 ORTHO05D008412 7.2e-114 414.8 388 55.7
Thecc.09G163600 Theobroma cacao HOM05D006491 ORTHO05D008412 2.1e-113 413.3 379 58.0
Rhsim03G0262200 Rhododendron simsii HOM05D006491 ORTHO05D008412 3.6e-113 412.5 370 58.1
CsaV3_1G029540 Cucumis sativus L. HOM05D006491 ORTHO05D008412 1.0e-112 411.0 366 60.4
MELO3C017512.2 Cucumis melo HOM05D006491 ORTHO05D008412 1.3e-112 410.6 376 59.0
MSTRG.10725 Avicennia marina HOM05D006491 ORTHO05D008412 6.7e-112 408.3 385 58.2
ClCG06G012970 Citrullus lanatus HOM05D006491 ORTHO05D008412 8.7e-112 407.9 376 57.2
ATR0580G190 Amborella trichopoda HOM05D006491 ORTHO05D008412 2.5e-111 406.4 380 54.7
Glyma.17G067500 Glycine max HOM05D006491 ORTHO05D008412 7.4e-111 404.8 391 56.8
ECA236G3989 Erigeron canadensis HOM05D006491 ORTHO05D008412 6.3e-110 401.7 378 59.0
THA.LOC104817809 Tarenaya hassleriana HOM05D006491 ORTHO05D008412 6.3e-110 401.7 352 58.8
Nitab4.5_0000593g0170 Nicotiana tabacum HOM05D006491 ORTHO05D008412 3.1e-109 399.4 367 59.4
Oeu043515.2 Olea europaea HOM05D006491 ORTHO05D008412 5.3e-109 398.7 442 51.6
Nitab4.5_0003408g0120 Nicotiana tabacum HOM05D006491 ORTHO05D008412 2.0e-108 396.7 357 60.2
Lsat_1_v5_gn_8_65441 Lactuca sativa HOM05D006491 ORTHO05D008412 3.4e-108 396.0 375 57.9
Thhalv10025588m.g Eutrema salsugineum HOM05D006491 ORTHO05D008412 1.7e-107 393.7 359 56.8
CAN.G135.50 Capsicum annuum HOM05D006491 ORTHO05D008412 2.2e-107 393.3 367 58.3
vmacro06036 Vaccinium macrocarpon HOM05D006491 ORTHO05D008412 2.2e-107 393.3 396 54.0
Sopen11g003610 Solanum pennellii HOM05D006491 ORTHO05D008412 2.9e-107 392.9 365 58.4
PGSC0003DMG401027355 Solanum tuberosum HOM05D006491 ORTHO05D008412 3.8e-107 392.5 365 58.1
Os09g0428900 Oryza sativa ssp. japonica HOM05D006491 ORTHO05D008412 5.0e-107 392.1 378 53.4
Solyc11g007750.3 Solanum lycopersicum HOM05D006491 ORTHO05D008412 8.5e-107 391.3 365 57.8
AL7G24610 Arabidopsis lyrata HOM05D006491 ORTHO05D008412 1.4e-106 390.6 359 55.7
Carub.0007s1278 Capsella rubella HOM05D006491 ORTHO05D008412 1.4e-106 390.6 359 55.4
BraA08t33984Z Brassica rapa HOM05D006491 ORTHO05D008412 7.2e-106 388.3 359 56.5
Atru.chr7.558 Acer truncatum HOM05D006491 ORTHO05D008412 1.6e-105 387.1 308 64.6
Aa31LG3G170 Aethionema arabicum HOM05D006491 ORTHO05D008412 2.7e-105 386.3 359 56.5
A08p20250 Brassica napus HOM05D006491 ORTHO05D008412 4.6e-105 385.6 360 56.4
C08p10580 Brassica napus HOM05D006491 ORTHO05D008412 3.0e-104 382.9 335 57.9
BcaB03g12553 Brassica carinata HOM05D006491 ORTHO05D008412 6.7e-104 381.7 327 59.6
CARHR235700 Cardamine hirsuta HOM05D006491 ORTHO05D008412 6.7e-104 381.7 359 55.2
BcaC07g38308 Brassica carinata HOM05D006491 ORTHO05D008412 1.1e-103 380.9 335 57.6
BolC8t48733H Brassica oleracea HOM05D006491 ORTHO05D008412 1.5e-103 380.6 335 57.6
Cfa013536 Carpinus fangiana HOM05D006491 ORTHO05D008412 2.6e-103 379.8 287 64.8
Sp7g25960 Schrenkiella parvula HOM05D006491 ORTHO05D008412 1.3e-102 377.5 358 55.0
unitig_62.g23494 Utricularia gibba HOM05D006491 ORTHO05D008412 3.7e-102 375.9 346 58.1
Migut.K00266 Erythranthe guttata HOM05D006491 ORTHO05D008412 4.5e-100 369.0 374 55.1
Zm00001eb313540 Zea mays HOM05D006491 ORTHO05D008412 2.2e-99 366.7 363 54.0
Cc06_g13780 Coffea canephora HOM05D006491 ORTHO05D008412 7.2e-98 361.7 380 53.4
Actinidia17333 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.1e-95 354.4 277 66.4
Glyma.13G093000 Glycine max HOM05D006491 ORTHO05D008412 9.7e-95 351.3 265 68.3
AT4G28020 Arabidopsis thaliana HOM05D006491 ORTHO05D008412 6.3e-94 348.6 279 61.6
Eucgr.C00197 Eucalyptus grandis HOM05D006491 ORTHO05D008412 2.4e-93 346.7 297 59.9
FAN07G0899 Fragaria x ananassa HOM05D006491 ORTHO05D008412 4.1e-93 345.9 387 51.4
Peaxi162Scf00113g00085 Petunia axillaris HOM05D006491 ORTHO05D008412 1.7e-91 340.5 321 56.4
AagrBONN_evm.TU.Sc2ySwM_344.1093 Anthoceros agrestis HOM05D006491 ORTHO05D008412 2.5e-90 336.7 273 59.3
Pp3c9_21480 Physcomitrium patens HOM05D006491 ORTHO05D008412 3.6e-89 332.8 397 47.4
SMO358G0273 Selaginella moellendorffii HOM05D006491 ORTHO05D008412 8.2e-86 321.6 368 48.9
Sed0015960 Sechium edule HOM05D006491 ORTHO05D008412 1.8e-85 320.5 282 57.8
DCAR_017948 Daucus carota HOM05D006491 ORTHO05D008412 4.5e-84 315.8 242 65.3
FvH4_4g08360 Fragaria vesca HOM05D006491 ORTHO05D008412 1.5e-82 310.8 240 65.4
Actinidia14076 Actinidia chinensis HOM05D006491 ORTHO05D008412 4.7e-81 305.8 213 70.0
Hma1.2p1_0921F.1_g236670 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 6.1e-81 305.4 318 52.5
Mapoly0045s0079 Marchantia polymorpha HOM05D006491 ORTHO05D008412 1.0e-80 304.7 335 45.7
Actinidia25168 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.1e-77 294.7 184 74.5
Lj9A730G48 Lonicera japonica HOM05D006491 ORTHO05D008412 3.8e-75 286.2 172 75.6
CDE05G0295 Ceratophyllum demersum HOM05D006491 ORTHO05D008412 3.0e-72 276.6 299 50.8
Peaxi162Scf00532g00051 Petunia axillaris HOM05D006491 ORTHO05D008412 7.0e-69 265.4 332 47.6
SGA_v2.0_scaffold242G44263 Striga asiatica HOM05D006491 ORTHO05D008412 2.0e-68 263.8 296 50.3
Cre14.g613450 Chlamydomonas reinhardtii HOM05D006491 ORTHO05D008412 5.2e-56 222.6 255 45.5
arahy.Tifrunner.gnm1.ann1.6S8GSB Arachis hypogaea HOM05D006491 ORTHO05D008412 3.0e-51 206.8 196 58.2
MCO01G751 Micromonas commoda HOM05D006491 ORTHO05D008412 4.1e-45 186.4 333 37.8
SEGI_13660 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 3.5e-44 183.3 137 62.8
PRCOL_00001913 Prasinoderma coloniale HOM05D006491 ORTHO05D008412 2.9e-38 163.7 265 39.6
MCO14G289 Micromonas commoda HOM05D006491 ORTHO05D008412 2.1e-36 157.5 170 49.4
MELO3C026731.2 Cucumis melo HOM05D006491 ORTHO05D008412 1.5e-34 151.4 164 52.4
SEGI_21199 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 2.8e-33 147.1 202 42.6
Ah.07g199480 Amaranthus hybridus HOM05D004191 ORTHO05D060174 2.8e-25 120.6 72 86.1
SGA_v2.0_scaffold242G44258 Striga asiatica HOM05D006491 ORTHO05D008412 4.5e-23 113.2 71 76.1
Duzib168G0391 Durio zibethinus HOM05D006491 ORTHO05D008412 5.8e-15 86.3 114 45.6
GSVIVG01029402001 Vitis vinifera HOM05D006491 ORTHO05D008412 9.6e-10 68.9 58 55.2
Hma1.2p1_1576F.1_g291650 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 1.1e-08 65.5 48 62.5


User provided reference genes

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