Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.09g227230 Amaranthus hybridus HOM05D008580 ORTHO05D010833 1.1e-77 293.1 142 100.0
Ah.10g028220 Amaranthus hybridus HOM05D008580 ORTHO05D010833 2.5e-77 292.0 142 99.3
Ah.10g028770 Amaranthus hybridus HOM05D008580 ORTHO05D010833 2.5e-77 292.0 142 99.3
Sc12g0009240 Simmondsia chinensis HOM05D008580 ORTHO05D010833 3.9e-46 188.3 94 93.6
EL10Ac5g11443 Beta vulgaris HOM05D008580 ORTHO05D010833 1.3e-41 173.3 94 88.3
Dinv06697 Davidia involucrata HOM05D008580 ORTHO05D010833 5.0e-41 171.4 94 86.2
Actinidia34893 Actinidia chinensis HOM05D008580 ORTHO05D010833 5.5e-40 167.9 94 85.1
Potri.007G061941 Populus trichocarpa HOM05D008580 ORTHO05D010833 5.5e-40 167.9 94 86.2
SabraMtG0002100 Salix brachista HOM05D008580 ORTHO05D010833 5.5e-40 167.9 94 86.2
Gohir.D06G002900 Gossypium hirsutum HOM05D008580 ORTHO05D010833 4.7e-39 164.9 93 84.9
Aqoxy12s020 Aquilegia oxysepala HOM05D008580 ORTHO05D010833 2.3e-38 162.5 93 84.9
Gorai.001G166600 Gossypium raimondii HOM05D008580 ORTHO05D010833 5.7e-37 157.9 88 86.4
Sabra18G0084100 Salix brachista HOM05D008580 ORTHO05D010833 9.7e-37 157.1 85 88.2
CAN.G1001.37 Capsicum annuum HOM05D008580 ORTHO05D010833 4.8e-36 154.8 94 78.7
Oeu049592.1 Olea europaea HOM05D008580 ORTHO05D010833 9.1e-35 150.6 95 80.0
Sp3g25760 Schrenkiella parvula HOM05D008580 ORTHO05D010833 1.9e-32 142.9 81 84.0
SHI13992 Sapria himalayana HOM05D008580 ORTHO05D010833 6.1e-31 137.9 130 59.2
Nitab4.5_0000085g0070 Nicotiana tabacum HOM05D008580 ORTHO05D010833 1.2e-29 133.7 75 82.7
COL.COLO4_28185 Corchorus olitorius HOM05D008580 ORTHO05D010833 7.5e-29 131.0 73 83.6
Cfa023042 Carpinus fangiana HOM05D008580 ORTHO05D010833 1.3e-28 130.2 78 82.1
Nitab4.5_0007077g0010 Nicotiana tabacum HOM05D008580 ORTHO05D010833 2.4e-27 125.9 67 86.6
SHI24206 Sapria himalayana HOM05D008580 ORTHO05D010833 9.1e-27 124.0 100 64.0
CAN.G380.4 Capsicum annuum HOM05D008580 ORTHO05D010833 1.0e-25 120.6 75 74.7
PGSC0003DMG400034858 Solanum tuberosum HOM05D008580 ORTHO05D010833 6.5e-25 117.9 120 50.8
SGA_v2.0_scaffold245G44599 Striga asiatica HOM05D008580 ORTHO05D010833 1.6e-23 113.2 77 76.6
BcaC08g43708 Brassica carinata HOM05D011356 ORTHO05D013405 2.1e-23 112.8 58 91.4
Nitab4.5_0000172g1680 Nicotiana tabacum HOM05D008580 ORTHO05D010833 3.7e-20 102.1 64 75.0
CAN.G505.15 Capsicum annuum HOM05D004909 ORTHO05D009316 2.7e-18 95.9 57 78.9
Nitab4.5_0001788g0370 Nicotiana tabacum HOM05D008580 ORTHO05D010833 2.8e-15 85.9 48 79.2
PGSC0003DMG400009578 Solanum tuberosum HOM05D008580 ORTHO05D010833 3.0e-14 82.4 52 73.1
EL10Ac6g14208 Beta vulgaris HOM05D008580 ORTHO05D010833 6.8e-14 81.3 77 55.8
BcaC05g26877 Brassica carinata HOM05D008580 ORTHO05D010833 3.4e-13 79.0 48 83.3
SHI51835 Sapria himalayana HOM05D008580 ORTHO05D010833 4.1e-11 72.0 44 84.1
Ca_14828_v3 Cicer arietinum L. HOM05D008580 ORTHO05D010833 1.6e-07 60.1 36 80.6


User provided reference genes

Program Settings