Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.09g226530 Amaranthus hybridus HOM05D000002 ORTHO05D000047 1.6e-61 239.2 120 100.0
Ah.08g216690 Amaranthus hybridus HOM05D000002 ORTHO05D000047 6.3e-45 184.1 119 74.8
Ah.08g217210 Amaranthus hybridus HOM05D000002 ORTHO05D000001 5.9e-43 177.6 119 71.4
Ah.11g041190 Amaranthus hybridus HOM05D000002 ORTHO05D000047 4.1e-36 154.8 100 78.0
Ah.11g043810 Amaranthus hybridus HOM05D000002 ORTHO05D000047 8.5e-34 147.1 119 60.5
Ah.02g115850 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.6e-32 142.9 119 59.7
Ah.03g140660 Amaranthus hybridus HOM05D000002 ORTHO05D000047 1.0e-31 140.2 119 57.1
Ah.03g138700 Amaranthus hybridus HOM05D000002 ORTHO05D000047 3.0e-31 138.7 115 57.4
Ah.09g230280 Amaranthus hybridus HOM05D000002 ORTHO05D000047 5.2e-31 137.9 119 57.1
Ah.08g217270 Amaranthus hybridus HOM05D000002 ORTHO05D000047 8.8e-31 137.1 119 55.5
Ah.08g221390 Amaranthus hybridus HOM05D000002 ORTHO05D000047 3.3e-30 135.2 119 55.5
Ah.07g196710 Amaranthus hybridus HOM05D000002 ORTHO05D000047 9.1e-28 127.1 119 52.9
AUR62012255 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.3e-26 123.2 119 56.3
Ah.01g009770 Amaranthus hybridus HOM05D000002 ORTHO05D000047 3.8e-26 121.7 113 52.2
Ah.13g069800 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.9e-25 119.4 117 56.4
Ah.03g145780 Amaranthus hybridus HOM05D000002 ORTHO05D000047 6.1e-24 114.4 115 50.4
Ah.16g108640 Amaranthus hybridus HOM05D000002 ORTHO05D000047 8.0e-24 114.0 111 53.2
Ah.10g035860 Amaranthus hybridus HOM05D000002 ORTHO05D000047 3.3e-22 108.6 115 48.7
Ah.03g140010 Amaranthus hybridus HOM05D000002 ORTHO05D000047 2.8e-21 105.5 75 72.0
AUR62038768 Chenopodium quinoa HOM05D000002 ORTHO05D000047 4.8e-21 104.8 118 49.2
ECA234G1548 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.3e-21 104.4 121 49.6
AUR62028809 Chenopodium quinoa HOM05D000002 ORTHO05D000001 8.3e-21 104.0 95 58.9
Ah.02g124320 Amaranthus hybridus HOM05D000002 ORTHO05D000047 1.8e-20 102.8 75 68.0
AUR62008360 Chenopodium quinoa HOM05D000002 ORTHO05D000047 1.8e-20 102.8 115 47.0
Ah.04g154970 Amaranthus hybridus HOM05D000002 ORTHO05D000001 9.1e-20 100.5 119 47.9
Ah.14g082800 Amaranthus hybridus HOM05D000002 ORTHO05D000047 1.6e-19 99.8 117 46.2
AUR62019977 Chenopodium quinoa HOM05D000002 ORTHO05D000047 1.6e-19 99.8 117 47.0
AUR62016548 Chenopodium quinoa HOM05D000002 ORTHO05D000047 2.0e-19 99.4 121 45.5
AUR62019736 Chenopodium quinoa HOM05D000002 ORTHO05D000047 5.9e-19 97.8 123 43.1
Ah.06g190070 Amaranthus hybridus HOM05D000002 ORTHO05D000047 1.0e-18 97.1 119 47.1
AUR62035711 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.7e-18 96.3 118 46.6
Ah.02g120440 Amaranthus hybridus HOM05D000002 ORTHO05D000047 2.2e-18 95.9 115 46.1
Ah.03g140180 Amaranthus hybridus HOM05D000002 ORTHO05D000047 2.2e-18 95.9 53 81.1
Ah.15g093520 Amaranthus hybridus HOM05D000002 ORTHO05D000047 3.8e-18 95.1 111 45.0
AUR62009741 Chenopodium quinoa HOM05D000002 ORTHO05D000001 5.0e-18 94.7 113 43.4
Ah.16g105390 Amaranthus hybridus HOM05D000002 ORTHO05D000047 2.5e-17 92.4 119 45.4
Ah.01g008330 Amaranthus hybridus HOM05D000002 ORTHO05D000001 3.2e-17 92.0 119 43.7
AUR62016303 Chenopodium quinoa HOM05D000002 ORTHO05D000001 3.2e-17 92.0 95 48.4
AUR62027612 Chenopodium quinoa HOM05D000002 ORTHO05D000047 3.2e-17 92.0 116 44.8
AUR62017687 Chenopodium quinoa HOM05D000002 ORTHO05D000047 5.5e-17 91.3 79 58.2
Ah.13g070650 Amaranthus hybridus HOM05D000002 ORTHO05D000047 7.2e-17 90.9 119 46.2
AUR62036366 Chenopodium quinoa HOM05D000002 ORTHO05D000047 7.2e-17 90.9 133 38.3
AUR62035497 Chenopodium quinoa HOM05D000002 ORTHO05D000047 1.2e-16 90.1 121 43.8
AUR62002676 Chenopodium quinoa HOM05D000002 ORTHO05D000047 1.6e-16 89.7 78 56.4
AUR62002721 Chenopodium quinoa HOM05D000945 ORTHO05D000919 2.1e-16 89.4 99 50.5
AUR62037749 Chenopodium quinoa HOM05D000002 ORTHO05D000047 2.1e-16 89.4 137 36.5
AUR62013402 Chenopodium quinoa HOM05D000002 ORTHO05D000047 2.7e-16 89.0 66 63.6
AUR62016451 Chenopodium quinoa HOM05D000002 ORTHO05D000047 2.7e-16 89.0 79 57.0
AUR62030372 Chenopodium quinoa HOM05D000002 ORTHO05D000047 3.6e-16 88.6 79 54.4
AUR62031594 Chenopodium quinoa HOM05D003659 ORTHO05D004298 3.6e-16 88.6 85 50.6
Ah.07g199380 Amaranthus hybridus HOM05D000002 ORTHO05D000047 6.1e-16 87.8 119 42.9
Ah.10g033980 Amaranthus hybridus HOM05D000002 ORTHO05D000047 1.8e-15 86.3 56 71.4
AUR62020303 Chenopodium quinoa HOM05D000002 ORTHO05D000047 2.3e-15 85.9 117 42.7
AUR62027904 Chenopodium quinoa HOM05D000002 ORTHO05D000047 2.3e-15 85.9 96 44.8
AUR62033917 Chenopodium quinoa HOM05D000002 ORTHO05D000047 5.2e-15 84.7 115 39.1
AUR62040558 Chenopodium quinoa HOM05D000002 ORTHO05D000047 1.5e-14 83.2 85 48.2
AUR62041521 Chenopodium quinoa HOM05D000002 ORTHO05D000047 2.0e-14 82.8 86 46.5
AUR62043299 Chenopodium quinoa HOM05D000002 ORTHO05D000047 2.0e-14 82.8 86 46.5
Ah.04g154620 Amaranthus hybridus HOM05D000002 ORTHO05D000047 3.4e-14 82.0 112 42.0
Ah.11g043090 Amaranthus hybridus HOM05D000002 ORTHO05D000047 4.4e-14 81.6 87 49.4
Ah.04g159430 Amaranthus hybridus HOM05D000002 ORTHO05D000047 2.8e-13 79.0 105 41.0
Ah.08g223040 Amaranthus hybridus HOM05D000002 ORTHO05D014350 2.8e-13 79.0 93 46.2
Ah.09g230030 Amaranthus hybridus HOM05D000002 ORTHO05D000047 1.1e-12 77.0 119 39.5
AUR62004885 Chenopodium quinoa HOM05D000002 ORTHO05D000047 1.8e-12 76.3 70 57.1
AUR62023719 Chenopodium quinoa HOM05D000002 ORTHO05D000047 1.8e-12 76.3 55 65.5
AUR62040344 Chenopodium quinoa HOM05D000002 ORTHO05D000047 5.4e-12 74.7 112 36.6
Ah.03g140190 Amaranthus hybridus HOM05D000002 ORTHO05D000001 9.1e-12 73.9 56 64.3
AUR62002827 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.2e-11 73.6 64 56.2
Ah.02g118140 Amaranthus hybridus HOM05D000002 ORTHO05D000047 3.5e-11 72.0 60 58.3
Ah.11g043270 Amaranthus hybridus HOM05D000002 ORTHO05D000047 1.0e-10 70.5 41 78.0
AUR62017382 Chenopodium quinoa HOM05D000002 ORTHO05D000001 3.8e-10 68.6 88 45.5
Ah.08g219750 Amaranthus hybridus HOM05D000002 ORTHO05D000047 5.0e-10 68.2 41 78.0
Ah.09g228960 Amaranthus hybridus HOM05D000002 ORTHO05D000047 8.6e-10 67.4 75 45.3
AUR62033430 Chenopodium quinoa HOM05D000002 ORTHO05D000047 1.1e-09 67.0 84 45.2
AUR62014608 Chenopodium quinoa HOM05D000022 ORTHO05D000047 1.9e-09 66.2 83 42.2
AUR62017512 Chenopodium quinoa HOM05D000002 ORTHO05D000001 2.5e-09 65.9 120 35.0
AUR62039356 Chenopodium quinoa HOM05D000002 ORTHO05D000047 4.2e-09 65.1 117 37.6
AUR62042390 Chenopodium quinoa HOM05D000002 ORTHO05D000047 4.2e-09 65.1 117 37.6
Ah.02g110770 Amaranthus hybridus HOM05D000002 ORTHO05D000001 5.5e-09 64.7 60 56.7
AUR62036112 Chenopodium quinoa HOM05D000002 ORTHO05D000047 5.5e-09 64.7 68 41.2
AUR62040110 Chenopodium quinoa HOM05D000002 ORTHO05D000047 5.5e-09 64.7 74 41.9
Thecc.06G106100 Theobroma cacao HOM05D000002 ORTHO05D000047 1.0e-07 60.5 124 33.1
Sopen02g016850 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-07 59.7 89 42.7
Sopen04g023910 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-07 59.7 89 42.7
Sopen08g017490 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-07 59.7 89 42.7
Ah.11g041540 Amaranthus hybridus HOM05D000002 ORTHO05D000047 2.3e-07 59.3 52 55.8
ECA247G3210 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-07 59.3 90 40.0
AUR62017499 Chenopodium quinoa HOM05D000002 ORTHO05D000001 4.0e-07 58.5 90 38.9
Sopen01g036800 Solanum pennellii HOM05D000002 ORTHO05D000001 4.0e-07 58.5 124 35.5
Ah.05g179170 Amaranthus hybridus HOM05D000002 ORTHO05D000047 5.2e-07 58.2 54 48.1
AUR62009943 Chenopodium quinoa HOM05D000002 ORTHO05D000047 5.2e-07 58.2 99 36.4
AUR62015749 Chenopodium quinoa HOM05D000002 ORTHO05D000047 6.8e-07 57.8 46 58.7
AUR62024540 Chenopodium quinoa HOM05D000002 ORTHO05D000001 6.8e-07 57.8 58 53.4
TPR.G33357 Trifolium pratense HOM05D000002 ORTHO05D000047 8.9e-07 57.4 85 40.0
Thecc.01G196100 Theobroma cacao HOM05D000002 ORTHO05D000047 1.2e-06 57.0 128 32.0
MBI03_g40517_MAGBIO Magnolia biondii HOM05D000002 ORTHO05D000047 1.5e-06 56.6 111 36.0
ECA246G1466 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.0e-06 56.2 101 34.7
Rhsim06G0010400 Rhododendron simsii HOM05D000002 ORTHO05D000047 3.4e-06 55.5 85 35.3
Rhsim12G0120200 Rhododendron simsii HOM05D000002 ORTHO05D000047 3.4e-06 55.5 85 35.3
Manes.07G069230 Manihot esculenta HOM05D000002 ORTHO05D015591 4.4e-06 55.1 104 35.6
Sopen11g017330 Solanum pennellii HOM05D000002 ORTHO05D000001 4.4e-06 55.1 125 32.0
ECA240G2438 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.7e-06 54.7 116 27.6
ECA232G0866 Erigeron canadensis HOM05D000002 ORTHO05D000047 7.5e-06 54.3 100 33.0
ECA236G3413 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.5e-06 54.3 84 33.3
Rhsim07G0134800 Rhododendron simsii HOM05D000002 ORTHO05D000047 9.8e-06 53.9 101 30.7
Sopen01g006610 Solanum pennellii HOM05D000002 ORTHO05D000001 9.8e-06 53.9 124 34.7


User provided reference genes

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