Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.09g225230 Amaranthus hybridus HOM05D006257 ORTHO05D007708 4.4e-106 388.3 242 100.0
AUR62011151 Chenopodium quinoa HOM05D006257 ORTHO05D007708 1.1e-80 303.9 247 74.1
EL10Ac8g18684 Beta vulgaris HOM05D006257 ORTHO05D007708 4.3e-77 292.0 211 76.8
AUR62013336 Chenopodium quinoa HOM05D006257 ORTHO05D007708 1.2e-74 283.9 265 67.5
Hund09262 Selenicereus undatus HOM05D006257 ORTHO05D007708 1.9e-56 223.4 174 73.0
Potri.018G129600 Populus trichocarpa HOM05D006257 ORTHO05D007708 3.5e-55 219.2 242 53.7
Hma1.2p1_0931F.1_g238140 Hydrangea macrophylla HOM05D006257 ORTHO05D007708 1.0e-54 217.6 172 67.4
Peaxi162Scf00313g00815 Petunia axillaris HOM05D006257 ORTHO05D007708 1.8e-54 216.9 172 67.4
Actinidia21972 Actinidia chinensis HOM05D006257 ORTHO05D007708 2.3e-54 216.5 172 67.4
Eucgr.C04235 Eucalyptus grandis HOM05D006257 ORTHO05D007708 2.3e-54 216.5 175 70.3
Gohir.A07G036500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 2.3e-54 216.5 172 68.6
Gohir.D07G040500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 2.3e-54 216.5 172 68.6
Gorai.001G043000 Gossypium raimondii HOM05D006257 ORTHO05D007708 2.3e-54 216.5 172 68.6
Lalb_Chr13g0301741 Lupinus albus HOM05D006257 ORTHO05D007708 3.0e-54 216.1 174 65.5
Duzib168G0222 Durio zibethinus HOM05D006257 ORTHO05D007708 3.9e-54 215.7 172 68.0
Lj4g0014254 Lotus japonicus HOM05D006257 ORTHO05D007708 1.5e-53 213.8 172 66.9
Manes.06G057000 Manihot esculenta HOM05D006257 ORTHO05D007708 1.5e-53 213.8 241 58.5
vmacro20574 Vaccinium macrocarpon HOM05D006257 ORTHO05D007708 1.9e-53 213.4 173 65.9
Actinidia40485 Actinidia chinensis HOM05D006257 ORTHO05D007708 2.5e-53 213.0 173 66.5
CSS0030940 Camellia sinensis var. sinensis HOM05D006257 ORTHO05D007708 3.3e-53 212.6 172 65.1
Duzib187G1365 Durio zibethinus HOM05D006257 ORTHO05D007708 3.3e-53 212.6 248 54.8
Ca_06925_v3 Cicer arietinum L. HOM05D006257 ORTHO05D007708 4.3e-53 212.2 243 53.9
COL.COLO4_35097 Corchorus olitorius HOM05D006257 ORTHO05D007708 4.3e-53 212.2 252 56.0
Solyc12g009600.2 Solanum lycopersicum HOM05D006257 ORTHO05D007708 1.3e-52 210.7 172 66.3
Sopen12g004590 Solanum pennellii HOM05D006257 ORTHO05D007708 1.3e-52 210.7 172 66.3
CiPaw.03G245900 Carya illinoinensis HOM05D006257 ORTHO05D007708 1.6e-52 210.3 172 65.7
PGR102G0698 Punica granatum HOM05D006257 ORTHO05D007708 1.6e-52 210.3 243 53.5
TAR636G3495 Trochodendron aralioides HOM05D006257 ORTHO05D007708 1.6e-52 210.3 172 66.9
GSVIVG01015564001 Vitis vinifera HOM05D006257 ORTHO05D007708 2.2e-52 209.9 173 65.9
Cpa.g.sc46.16 Carica papaya HOM05D006257 ORTHO05D007708 2.8e-52 209.5 172 66.3
Nitab4.5_0006319g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 2.8e-52 209.5 174 65.5
Thecc.09G128900 Theobroma cacao HOM05D006257 ORTHO05D007708 2.8e-52 209.5 249 55.0
Aqoxy7G02265 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 3.7e-52 209.1 172 65.7
CiPaw.04G172800 Carya illinoinensis HOM05D006257 ORTHO05D007708 8.2e-52 208.0 246 52.8
CAN.G551.82 Capsicum annuum HOM05D006257 ORTHO05D007708 1.4e-51 207.2 174 63.8
Nitab4.5_0001349g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 1.4e-51 207.2 174 64.9
Potri.006G067600 Populus trichocarpa HOM05D006257 ORTHO05D007708 1.4e-51 207.2 242 50.8
TPR.G26482 Trifolium pratense HOM05D006257 ORTHO05D007708 1.4e-51 207.2 172 64.5
ClCG11G003160 Citrullus lanatus HOM05D006257 ORTHO05D007708 1.8e-51 206.8 172 65.1
Medtr0339s0030 Medicago truncatula HOM05D006257 ORTHO05D007708 2.4e-51 206.5 174 63.2
Atru.chr7.1126 Acer truncatum HOM05D006257 ORTHO05D007708 3.1e-51 206.1 243 51.9
CsaV3_2G002980 Cucumis sativus L. HOM05D006257 ORTHO05D007708 4.1e-51 205.7 240 54.6
arahy.Tifrunner.gnm1.ann1.BX3F9W Arachis hypogaea HOM05D006257 ORTHO05D007708 5.3e-51 205.3 174 64.9
arahy.Tifrunner.gnm1.ann1.FTT948 Arachis hypogaea HOM05D006257 ORTHO05D007708 5.3e-51 205.3 174 64.9
MELO3C004491.2 Cucumis melo HOM05D006257 ORTHO05D007708 1.2e-50 204.1 172 62.8
Lj7A424T23 Lonicera japonica HOM05D006257 ORTHO05D007708 1.5e-50 203.8 171 63.7
Glyma.04G142800 Glycine max HOM05D006257 ORTHO05D007708 2.0e-50 203.4 174 63.2
VMungo1215G0813 Vigna mungo HOM05D006257 ORTHO05D007708 2.0e-50 203.4 172 64.0
MD02G1029500 Malus domestica HOM05D006257 ORTHO05D007708 2.6e-50 203.0 172 63.4
Sabra18G0110100 Salix brachista HOM05D006257 ORTHO05D007708 3.4e-50 202.6 203 56.2
Prupe.7G245400 Prunus persica HOM05D006257 ORTHO05D007708 7.7e-50 201.4 172 62.2
QL02p088998 Quercus lobata HOM05D006257 ORTHO05D007708 7.7e-50 201.4 170 61.2
Phvul.003G166300 Phaseolus vulgaris HOM05D006257 ORTHO05D007708 1.0e-49 201.1 172 64.0
MD15G1170900 Malus domestica HOM05D006257 ORTHO05D007708 2.2e-49 199.9 172 63.4
Ciclev10009322m.g Citrus clementina HOM05D006257 ORTHO05D007708 3.8e-49 199.1 177 63.8
Glyma.06G224200 Glycine max HOM05D006257 ORTHO05D007708 3.8e-49 199.1 174 61.5
ECA234G3820 Erigeron canadensis HOM05D006257 ORTHO05D007708 5.0e-49 198.7 172 61.6
Cc06_g08290 Coffea canephora HOM05D006257 ORTHO05D007708 8.5e-49 198.0 171 61.4
Oeu052179.2 Olea europaea HOM05D006257 ORTHO05D007708 8.5e-49 198.0 172 65.1
HanXRQChr10g0315681 Helianthus annuus HOM05D006257 ORTHO05D007708 1.4e-48 197.2 172 62.8
Lalb_Chr08g0234691 Lupinus albus HOM05D006257 ORTHO05D007708 1.4e-48 197.2 172 63.4
Lalb_Chr07g0179081 Lupinus albus HOM05D006257 ORTHO05D007708 3.2e-48 196.1 172 62.8
Sabra06G0050300 Salix brachista HOM05D006257 ORTHO05D007708 3.2e-48 196.1 259 47.9
CANSAT11G2152 Cannabis sativa HOM05D006257 ORTHO05D007708 9.4e-48 194.5 134 76.1
DCAR_020916 Daucus carota HOM05D006257 ORTHO05D007708 1.2e-47 194.1 175 61.1
Sed0025440 Sechium edule HOM05D006257 ORTHO05D007708 1.2e-47 194.1 173 61.8
Sp6g02450 Schrenkiella parvula HOM05D006257 ORTHO05D007708 2.1e-47 193.4 177 61.6
THA.LOC104808977 Tarenaya hassleriana HOM05D006257 ORTHO05D007708 2.1e-47 193.4 177 61.0
CARHR250830 Cardamine hirsuta HOM05D006257 ORTHO05D007708 3.6e-47 192.6 175 62.9
MBI04_g29340_MAGBIO Magnolia biondii HOM05D006257 ORTHO05D007708 4.6e-47 192.2 171 62.0
Thhalv10028953m.g Eutrema salsugineum HOM05D006257 ORTHO05D007708 1.0e-46 191.0 177 60.5
TWI34G0058 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 1.4e-46 190.7 172 60.5
BolC9t53138H Brassica oleracea HOM05D006257 ORTHO05D007708 3.9e-46 189.1 178 59.6
PSO210G1348 Papaver somniferum HOM05D006257 ORTHO05D007708 3.9e-46 189.1 172 61.0
PSO210G1954 Papaver somniferum HOM05D006257 ORTHO05D007708 6.7e-46 188.3 172 60.5
BcaC04g23996 Brassica carinata HOM05D006257 ORTHO05D007708 8.8e-46 188.0 178 59.0
A09p01980 Brassica napus HOM05D006257 ORTHO05D007708 8.8e-46 188.0 178 59.0
C09p02090 Brassica napus HOM05D006257 ORTHO05D007708 8.8e-46 188.0 178 59.0
BraA09t35849Z Brassica rapa HOM05D006257 ORTHO05D007708 8.8e-46 188.0 178 59.0
TWI63G0502 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 8.8e-46 188.0 172 59.9
ATR0598G180 Amborella trichopoda HOM05D006257 ORTHO05D007708 2.5e-45 186.4 172 59.9
AL6G50510 Arabidopsis lyrata HOM05D006257 ORTHO05D007708 5.7e-45 185.3 177 59.9
AT4G02530 Arabidopsis thaliana HOM05D006257 ORTHO05D007708 9.7e-45 184.5 177 59.9
Oeu038255.2 Olea europaea HOM05D006257 ORTHO05D007708 1.3e-44 184.1 226 51.3
Aa31LG5G2160 Aethionema arabicum HOM05D006257 ORTHO05D007708 2.2e-44 183.3 179 60.9
Carub.0006s3460 Capsella rubella HOM05D006257 ORTHO05D007708 4.8e-44 182.2 177 58.8
Haze_25555 Corylus avellana HOM05D006257 ORTHO05D007708 6.3e-44 181.8 171 59.6
Lsat_1_v5_gn_5_95081 Lactuca sativa HOM05D006257 ORTHO05D007708 6.3e-44 181.8 163 60.7
HPP92_024114 Vanilla planifolia HOM05D006257 ORTHO05D007708 8.2e-44 181.4 163 59.5
Sc14g0000190 Simmondsia chinensis HOM05D006257 ORTHO05D007708 1.1e-43 181.0 173 62.4
HPP92_024119 Vanilla planifolia HOM05D006257 ORTHO05D007708 1.1e-43 181.0 163 59.5
unitig_37.g12643 Utricularia gibba HOM05D006257 ORTHO05D007708 1.4e-43 180.6 174 59.2
MSTRG.26415 Avicennia marina HOM05D006257 ORTHO05D007708 1.8e-43 180.3 174 58.6
TAR625G1128 Trochodendron aralioides HOM05D006257 ORTHO05D007708 3.1e-43 179.5 147 66.0
RcHm_v2.0_Chr2g0088141 Rosa chinensis HOM05D006257 ORTHO05D007708 5.3e-43 178.7 172 55.8
FAN23G1258 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.2e-42 177.6 173 56.6
CDE07G0641 Ceratophyllum demersum HOM05D006257 ORTHO05D007708 1.5e-42 177.2 163 61.3
FAN26G0886 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.5e-42 177.2 173 56.6
SGA_v2.0_scaffold63G21838 Striga asiatica HOM05D006257 ORTHO05D007708 2.6e-42 176.4 179 56.4
FvH4_1g03010 Fragaria vesca HOM05D006257 ORTHO05D007708 3.4e-42 176.0 173 56.1
FAN19G0162 Fragaria x ananassa HOM05D006257 ORTHO05D007708 3.4e-42 176.0 173 56.1
FAN28G1785 Fragaria x ananassa HOM05D006257 ORTHO05D007708 3.4e-42 176.0 173 56.1
Glyma.17G113300 Glycine max HOM05D006257 ORTHO05D007708 5.9e-42 175.3 174 57.5
Zm00001eb227340 Zea mays HOM05D006257 ORTHO05D007708 1.7e-41 173.7 168 53.0
Os06g0705100 Oryza sativa ssp. japonica HOM05D006257 ORTHO05D007708 5.0e-41 172.2 170 54.7
Migut.K00442 Erythranthe guttata HOM05D006257 ORTHO05D007708 4.2e-40 169.1 198 51.5
Nn8g39488 Nelumbo nucifera HOM05D006257 ORTHO05D007708 3.1e-35 152.9 202 51.0
Dinv36505 Davidia involucrata HOM05D006257 ORTHO05D007708 2.2e-33 146.7 189 51.3
BcaC03g16142 Brassica carinata HOM05D006257 ORTHO05D007708 3.2e-32 142.9 140 58.6
Manes.14G133800 Manihot esculenta HOM05D006257 ORTHO05D007708 5.2e-30 135.6 181 55.2
Aqoxy7G03671 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 2.0e-29 133.7 135 55.6
A02p24830 Brassica napus HOM05D006257 ORTHO05D007708 1.7e-28 130.6 156 48.7
BraA02t07471Z Brassica rapa HOM05D007780 ORTHO05D000140 3.1e-27 126.3 156 46.8
Mapoly0099s0035 Marchantia polymorpha HOM05D006257 ORTHO05D007708 7.7e-26 121.7 142 47.2
SMO111G0154 Selaginella moellendorffii HOM05D006257 ORTHO05D007708 1.7e-25 120.6 176 41.5
Psat4g037320 Pisum sativum HOM05D006257 ORTHO05D007708 2.2e-25 120.2 113 58.4
Sed0003979 Sechium edule HOM05D006257 ORTHO05D007708 2.9e-25 119.8 135 54.1
AagrBONN_evm.TU.Sc2ySwM_344.2604 Anthoceros agrestis HOM05D006257 ORTHO05D007708 3.0e-22 109.8 173 41.6
SEGI_32211 Sequoiadendron giganteum HOM05D006257 ORTHO05D007708 2.6e-21 106.7 128 46.9
Pp3c8_15020 Physcomitrium patens HOM05D006257 ORTHO05D007708 9.8e-21 104.8 143 43.4
C02p39320 Brassica napus HOM05D006257 ORTHO05D007708 8.3e-20 101.7 75 69.3
Mapoly0522s0001 Marchantia polymorpha HOM05D006257 ORTHO05D007708 7.2e-16 88.6 106 44.3
Pp3c24_6770 Physcomitrium patens HOM05D006257 ORTHO05D007708 1.7e-12 77.4 103 44.7
PRCOL_00001366 Prasinoderma coloniale HOM05D006257 ORTHO05D007708 3.6e-07 59.7 181 33.1
BcaB05g23639 Brassica carinata HOM05D006257 ORTHO05D007708 4.0e-06 56.2 70 52.9
FAN19G1291 Fragaria x ananassa HOM05D006257 ORTHO05D007708 4.0e-06 56.2 64 48.4


User provided reference genes

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