Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.08g221660 Amaranthus hybridus HOM05D000003 ORTHO05D000006 1.7e-75 285.8 136 100.0
Ah.02g118420 Amaranthus hybridus HOM05D000003 ORTHO05D000006 8.5e-22 107.5 62 72.6
Ah.01g011890 Amaranthus hybridus HOM05D000003 ORTHO05D000006 1.6e-20 103.2 62 71.0
Ah.02g118390 Amaranthus hybridus HOM05D000003 ORTHO05D000006 2.7e-20 102.4 62 71.0
Ah.07g200070 Amaranthus hybridus HOM05D000003 ORTHO05D000007 1.5e-15 86.7 122 36.9
Ah.10g026680 Amaranthus hybridus HOM05D000003 ORTHO05D000004 8.5e-14 80.9 83 45.8
Ah.03g144270 Amaranthus hybridus HOM05D000003 ORTHO05D000006 1.4e-13 80.1 51 62.7
CAN.G321.6 Capsicum annuum HOM05D000003 ORTHO05D000006 2.0e-10 69.7 109 38.5
Nitab4.5_0006483g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000007 9.7e-10 67.4 59 44.1
Sopen00g005320 Solanum pennellii HOM05D000003 ORTHO05D000004 4.8e-09 65.1 99 35.4
TPR.G31613 Trifolium pratense HOM05D000003 ORTHO05D000007 6.3e-09 64.7 60 43.3
CAN.G276.7 Capsicum annuum HOM05D000024 ORTHO05D000006 1.1e-08 63.9 59 44.1
EL10Ac6g14381 Beta vulgaris HOM05D000003 ORTHO05D000006 1.4e-08 63.5 61 41.0
Sopen00g010250 Solanum pennellii HOM05D000003 ORTHO05D000004 2.4e-08 62.8 95 29.5
Sopen00g011080 Solanum pennellii HOM05D000003 ORTHO05D000006 2.4e-08 62.8 59 44.1
SHI14051 Sapria himalayana HOM05D000003 ORTHO05D000004 3.1e-08 62.4 103 27.2
TPR.G35752 Trifolium pratense HOM05D000003 ORTHO05D010993 3.1e-08 62.4 60 40.0
CANSAT25G3393 Cannabis sativa HOM05D000024 ORTHO05D000006 4.1e-08 62.0 67 44.8
SHI13433 Sapria himalayana HOM05D000003 ORTHO05D000004 4.1e-08 62.0 103 27.2
SHI46889 Sapria himalayana HOM05D000003 ORTHO05D000004 4.1e-08 62.0 103 28.2
SHI14129 Sapria himalayana HOM05D000003 ORTHO05D000007 5.3e-08 61.6 103 27.2
SHI50904 Sapria himalayana HOM05D000003 ORTHO05D000006 5.3e-08 61.6 104 27.9
CANSAT01G2488 Cannabis sativa HOM05D000003 ORTHO05D000006 7.0e-08 61.2 66 43.9
CANSAT35G1839 Cannabis sativa HOM05D000024 ORTHO05D000006 7.0e-08 61.2 67 43.3
SHI14738 Sapria himalayana HOM05D000003 ORTHO05D000004 7.0e-08 61.2 103 27.2
SHI27543 Sapria himalayana HOM05D000003 ORTHO05D000004 7.0e-08 61.2 104 27.9
SHI49151 Sapria himalayana HOM05D000003 ORTHO05D000004 7.0e-08 61.2 104 27.9
Sopen00g008680 Solanum pennellii HOM05D000003 ORTHO05D000004 7.0e-08 61.2 95 32.6
Sopen00g010970 Solanum pennellii HOM05D000003 ORTHO05D000006 7.0e-08 61.2 95 32.6
Sopen00g009000 Solanum pennellii HOM05D000003 ORTHO05D000004 9.1e-08 60.8 95 31.6
Sopen00g010500 Solanum pennellii HOM05D000003 ORTHO05D000004 9.1e-08 60.8 59 40.7
Sopen12g011790 Solanum pennellii HOM05D000003 ORTHO05D000004 9.1e-08 60.8 123 27.6
CANSAT42G0001 Cannabis sativa HOM05D000003 ORTHO05D000006 1.2e-07 60.5 67 43.3
Peaxi162Scf00104g00310 Petunia axillaris HOM05D000003 ORTHO05D000006 1.2e-07 60.5 68 41.2
SHI14472 Sapria himalayana HOM05D000003 ORTHO05D000004 1.2e-07 60.5 104 27.9
Sopen00g004660 Solanum pennellii HOM05D000003 ORTHO05D000004 1.2e-07 60.5 59 40.7
Sopen00g008350 Solanum pennellii HOM05D000003 ORTHO05D000004 1.2e-07 60.5 80 33.8
Sopen00g009450 Solanum pennellii HOM05D000003 ORTHO05D000004 1.2e-07 60.5 95 29.5
Sopen09g011430 Solanum pennellii HOM05D000003 ORTHO05D000004 1.2e-07 60.5 59 40.7
TPR.G8630 Trifolium pratense HOM05D000003 ORTHO05D000004 1.2e-07 60.5 60 41.7
CANSAT80G0416 Cannabis sativa HOM05D000003 ORTHO05D000004 1.5e-07 60.1 59 40.7
SHI48998 Sapria himalayana HOM05D000003 ORTHO05D000004 1.5e-07 60.1 99 26.3
SHI51855 Sapria himalayana HOM05D000003 ORTHO05D000004 1.5e-07 60.1 100 26.0
Sopen00g008000 Solanum pennellii HOM05D000003 ORTHO05D000004 1.5e-07 60.1 94 29.8
Ah.02g121180 Amaranthus hybridus HOM05D000003 ORTHO05D000006 2.0e-07 59.7 46 52.2
SHI48186 Sapria himalayana HOM05D000003 ORTHO05D000004 2.0e-07 59.7 103 26.2
Sopen00g009820 Solanum pennellii HOM05D000003 ORTHO05D000004 2.0e-07 59.7 59 42.4
Sopen00g011710 Solanum pennellii HOM05D000003 ORTHO05D000007 2.0e-07 59.7 59 40.7
Sopen00g004530 Solanum pennellii HOM05D000003 ORTHO05D000004 2.6e-07 59.3 95 31.6
SHI12662 Sapria himalayana HOM05D000003 ORTHO05D000007 3.4e-07 58.9 103 27.2
Hund22672 Selenicereus undatus HOM05D000003 ORTHO05D000006 3.4e-07 58.9 56 39.3
Aqoxy2G01321 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 4.5e-07 58.5 59 42.4
CANSAT11G1048 Cannabis sativa HOM05D000003 ORTHO05D000006 4.5e-07 58.5 59 42.4
Oeu038020.4 Olea europaea HOM05D000003 ORTHO05D000006 4.5e-07 58.5 82 30.5
Peaxi162Scf00169g00172 Petunia axillaris HOM05D000003 ORTHO05D000006 4.5e-07 58.5 68 36.8
Sopen12g011700 Solanum pennellii HOM05D000003 ORTHO05D000004 4.5e-07 58.5 95 29.5
Sopen00g005560 Solanum pennellii HOM05D000003 ORTHO05D000006 5.9e-07 58.2 59 39.0
Sopen00g012830 Solanum pennellii HOM05D000003 ORTHO05D000004 5.9e-07 58.2 94 29.8
Oeu014514.1 Olea europaea HOM05D000003 ORTHO05D000006 7.7e-07 57.8 67 34.3
SHI33828 Sapria himalayana HOM05D000003 ORTHO05D000004 7.7e-07 57.8 103 25.2
Sopen00g010420 Solanum pennellii HOM05D000003 ORTHO05D000007 7.7e-07 57.8 94 29.8
Sopen08g014400 Solanum pennellii HOM05D000003 ORTHO05D000004 7.7e-07 57.8 94 29.8
Aqoxy2G01536 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 1.0e-06 57.4 60 36.7
CANSAT56G2302 Cannabis sativa HOM05D000003 ORTHO05D000004 1.0e-06 57.4 55 45.5
Sopen00g004600 Solanum pennellii HOM05D000003 ORTHO05D000004 1.0e-06 57.4 95 28.4
Sopen12g013630 Solanum pennellii HOM05D000003 ORTHO05D000004 1.0e-06 57.4 59 39.0
Nitab4.5_0002059g0050 Nicotiana tabacum HOM05D000003 ORTHO05D000006 1.3e-06 57.0 58 43.1
Nitab4.5_0002468g0050 Nicotiana tabacum HOM05D000003 ORTHO05D000006 1.3e-06 57.0 74 35.1
Peaxi162Scf00097g01611 Petunia axillaris HOM05D011352 ORTHO05D009959 1.3e-06 57.0 126 27.8
Sopen00g004670 Solanum pennellii HOM05D000003 ORTHO05D000004 1.3e-06 57.0 95 30.5
Sopen05g020920 Solanum pennellii HOM05D000003 ORTHO05D000004 1.3e-06 57.0 59 39.0
CANSAT21G0660 Cannabis sativa HOM05D000003 ORTHO05D000006 1.7e-06 56.6 83 37.3
Peaxi162Scf00164g00114 Petunia axillaris HOM05D000003 ORTHO05D000007 1.7e-06 56.6 56 44.6
Hund07377 Selenicereus undatus HOM05D000185 ORTHO05D000105 1.7e-06 56.6 61 42.6
CAN.G79.73 Capsicum annuum HOM05D000003 ORTHO05D000006 2.2e-06 56.2 58 43.1
SHI32979 Sapria himalayana HOM05D000003 ORTHO05D000006 2.2e-06 56.2 68 39.7
Sopen07g017460 Solanum pennellii HOM05D000003 ORTHO05D000006 2.2e-06 56.2 59 39.0
Aqoxy1G00053 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 2.9e-06 55.8 57 42.1
Oeu008160.1 Olea europaea HOM05D000003 ORTHO05D000006 2.9e-06 55.8 81 32.1
Sopen00g004900 Solanum pennellii HOM05D000003 ORTHO05D000006 2.9e-06 55.8 59 39.0
Sopen00g007130 Solanum pennellii HOM05D000003 ORTHO05D000004 2.9e-06 55.8 94 28.7
Sabra13G0081900 Salix brachista HOM05D000003 ORTHO05D000006 3.8e-06 55.5 64 43.8
Sopen00g006710 Solanum pennellii HOM05D000003 ORTHO05D000004 3.8e-06 55.5 95 31.6
Sopen00g006870 Solanum pennellii HOM05D000003 ORTHO05D000004 3.8e-06 55.5 95 27.4
Sopen05g013420 Solanum pennellii HOM05D000003 ORTHO05D000004 3.8e-06 55.5 58 36.2
PGSC0003DMG400046562 Solanum tuberosum HOM05D000003 ORTHO05D000006 3.8e-06 55.5 61 36.1
CANSAT78G1955 Cannabis sativa HOM05D000003 ORTHO05D000006 5.0e-06 55.1 58 43.1
Psat7g191840 Pisum sativum HOM05D000003 ORTHO05D000006 5.0e-06 55.1 60 35.0
SHI46115 Sapria himalayana HOM05D000003 ORTHO05D000004 5.0e-06 55.1 69 31.9
Sopen00g004730 Solanum pennellii HOM05D000003 ORTHO05D000004 5.0e-06 55.1 60 36.7
Sopen00g009650 Solanum pennellii HOM05D000003 ORTHO05D000004 5.0e-06 55.1 95 29.5
Sopen04g018170 Solanum pennellii HOM05D000003 ORTHO05D000004 5.0e-06 55.1 58 37.9
Sopen10g008120 Solanum pennellii HOM05D000003 ORTHO05D000004 5.0e-06 55.1 58 37.9
CANSAT35G0526 Cannabis sativa HOM05D000003 ORTHO05D000006 6.5e-06 54.7 84 39.3
CANSAT80G1175 Cannabis sativa HOM05D000003 ORTHO05D000004 6.5e-06 54.7 98 32.7
CAN.G144.6 Capsicum annuum HOM05D000003 ORTHO05D000006 6.5e-06 54.7 56 42.9
Oeu001541.1 Olea europaea HOM05D000003 ORTHO05D000006 6.5e-06 54.7 56 37.5
Oeu024829.1 Olea europaea HOM05D000003 ORTHO05D000006 6.5e-06 54.7 67 32.8
TPR.G1529 Trifolium pratense HOM05D000003 ORTHO05D000004 6.5e-06 54.7 60 38.3
EL10Ac4g09271 Beta vulgaris HOM05D000003 ORTHO05D000006 8.5e-06 54.3 61 36.1
CANSAT64G0288 Cannabis sativa HOM05D000003 ORTHO05D000006 8.5e-06 54.3 58 37.9
CAN.G1452.3 Capsicum annuum HOM05D000003 ORTHO05D000006 8.5e-06 54.3 60 36.7
Nitab4.5_0002681g0040 Nicotiana tabacum HOM05D000003 ORTHO05D000006 8.5e-06 54.3 66 37.9
Oeu010041.1 Olea europaea HOM05D000003 ORTHO05D000006 8.5e-06 54.3 56 35.7
PSO801G0582 Papaver somniferum HOM05D000003 ORTHO05D000004 8.5e-06 54.3 90 31.1
Psat0s234g0040 Pisum sativum HOM05D000003 ORTHO05D000006 8.5e-06 54.3 55 41.8
TPR.G20906 Trifolium pratense HOM05D000003 ORTHO05D000006 8.5e-06 54.3 67 35.8


User provided reference genes

Program Settings