Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.08g220260 Amaranthus hybridus HOM05D006115 ORTHO05D007528 1.8e-85 319.3 177 100.0
AUR62041946 Chenopodium quinoa HOM05D006115 ORTHO05D007528 3.5e-68 261.9 179 81.6
AUR62028441 Chenopodium quinoa HOM05D006115 ORTHO05D007528 2.5e-66 255.8 179 81.0
Nn1g03988 Nelumbo nucifera HOM05D006115 ORTHO05D007528 8.1e-49 197.6 180 65.6
Potri.005G206200 Populus trichocarpa HOM05D006115 ORTHO05D007528 1.1e-48 197.2 179 65.9
Cfa014568 Carpinus fangiana HOM05D006115 ORTHO05D007528 1.2e-47 193.7 180 65.6
COL.COLO4_35403 Corchorus olitorius HOM05D006115 ORTHO05D007528 1.5e-47 193.4 181 64.6
PSO832G3416 Papaver somniferum HOM05D006115 ORTHO05D007528 2.0e-47 193.0 181 64.1
Sabra05G0156800 Salix brachista HOM05D006115 ORTHO05D007528 2.6e-47 192.6 182 63.7
RcHm_v2.0_Chr2g0162381 Rosa chinensis HOM05D006115 ORTHO05D007528 7.6e-47 191.0 181 64.6
GSVIVG01030552001 Vitis vinifera HOM05D006115 ORTHO05D007528 7.6e-47 191.0 181 65.7
PSO210G0967 Papaver somniferum HOM05D006115 ORTHO05D007528 1.3e-46 190.3 180 62.8
Peaxi162Scf00132g00062 Petunia axillaris HOM05D006115 ORTHO05D007528 2.9e-46 189.1 181 64.1
Peaxi162Scf00610g00313 Petunia axillaris HOM05D006115 ORTHO05D007528 2.9e-46 189.1 181 64.1
Sabra02G0045600 Salix brachista HOM05D006115 ORTHO05D007528 2.9e-46 189.1 182 63.2
Aqoxy4G01223 Aquilegia oxysepala HOM05D006115 ORTHO05D007528 3.8e-46 188.7 180 64.4
MBI02_g19258_MAGBIO Magnolia biondii HOM05D006115 ORTHO05D007528 3.8e-46 188.7 179 63.7
FvH4_6g45050 Fragaria vesca HOM05D006115 ORTHO05D007528 4.9e-46 188.3 181 63.5
FAN14G2522 Fragaria x ananassa HOM05D006115 ORTHO05D007528 4.9e-46 188.3 181 63.5
Duzib132G1267 Durio zibethinus HOM05D006115 ORTHO05D007528 8.4e-46 187.6 181 64.6
Ciclev10016927m.g Citrus clementina HOM05D006115 ORTHO05D007528 1.1e-45 187.2 179 63.1
Hma1.2p1_0875F.1_g231400 Hydrangea macrophylla HOM05D006115 ORTHO05D007528 1.4e-45 186.8 179 65.4
Phvul.005G105900 Phaseolus vulgaris HOM05D006115 ORTHO05D007528 1.4e-45 186.8 177 66.7
MD09G1090500 Malus domestica HOM05D006115 ORTHO05D007528 1.9e-45 186.4 181 61.3
Prupe.3G235100 Prunus persica HOM05D006115 ORTHO05D007528 1.9e-45 186.4 183 61.7
FAN09G2594 Fragaria x ananassa HOM05D006115 ORTHO05D007528 2.4e-45 186.0 181 60.8
CANSAT64G2665 Cannabis sativa HOM05D006115 ORTHO05D007528 3.2e-45 185.7 180 65.6
FAN02G4183 Fragaria x ananassa HOM05D006115 ORTHO05D007528 3.2e-45 185.7 181 60.8
Manes.08G098700 Manihot esculenta HOM05D006115 ORTHO05D007528 3.2e-45 185.7 179 61.5
Eucgr.K00947 Eucalyptus grandis HOM05D006115 ORTHO05D007528 7.1e-45 184.5 181 63.0
Potri.002G056300 Populus trichocarpa HOM05D006115 ORTHO05D007528 7.1e-45 184.5 182 61.0
CSS0015532 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 1.2e-44 183.7 179 62.0
CSS0031699 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 1.2e-44 183.7 179 62.0
Haze_13113 Corylus avellana HOM05D006115 ORTHO05D007528 1.2e-44 183.7 179 62.6
Duzib248G0317 Durio zibethinus HOM05D006115 ORTHO05D007528 3.5e-44 182.2 182 62.6
MD17G1079700 Malus domestica HOM05D006115 ORTHO05D007528 3.5e-44 182.2 181 60.2
CiPaw.04G123900 Carya illinoinensis HOM05D006115 ORTHO05D007528 4.6e-44 181.8 183 61.7
Medtr2g090200 Medicago truncatula HOM05D006115 ORTHO05D007528 4.6e-44 181.8 177 64.4
Oeu029929.1 Olea europaea HOM05D006115 ORTHO05D007528 4.6e-44 181.8 181 63.5
Nitab4.5_0005380g0050 Nicotiana tabacum HOM05D006115 ORTHO05D007528 6.0e-44 181.4 181 61.3
PGR142G3842 Punica granatum HOM05D006115 ORTHO05D007528 6.0e-44 181.4 186 59.7
DCAR_019192 Daucus carota HOM05D006115 ORTHO05D007528 7.8e-44 181.0 178 58.4
Gohir.D01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 7.8e-44 181.0 185 58.4
Lalb_Chr24g0399841 Lupinus albus HOM05D006115 ORTHO05D007528 7.8e-44 181.0 177 62.7
QL08p037826 Quercus lobata HOM05D006115 ORTHO05D007528 7.8e-44 181.0 181 60.8
VMungo1080G1219 Vigna mungo HOM05D006115 ORTHO05D007528 7.8e-44 181.0 177 64.4
Gorai.002G017600 Gossypium raimondii HOM05D006115 ORTHO05D007528 1.0e-43 180.6 185 58.4
Lj3g0001000 Lotus japonicus HOM05D006115 ORTHO05D007528 1.0e-43 180.6 177 62.7
Atru.chr6.3034 Acer truncatum HOM05D006115 ORTHO05D007528 1.3e-43 180.3 179 60.9
Thecc.02G175700 Theobroma cacao HOM05D006115 ORTHO05D007528 1.7e-43 179.9 180 61.7
TWI75G0783 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 1.7e-43 179.9 175 61.7
unitig_749.g13954 Utricularia gibba HOM05D006115 ORTHO05D007528 1.7e-43 179.9 179 62.0
Cc05_g06750 Coffea canephora HOM05D006115 ORTHO05D007528 2.3e-43 179.5 184 61.4
Psat7g036720 Pisum sativum HOM05D006115 ORTHO05D007528 2.3e-43 179.5 177 64.4
Lalb_Chr14g0366761 Lupinus albus HOM05D006115 ORTHO05D007528 3.9e-43 178.7 177 63.8
ClCG02G001140 Citrullus lanatus HOM05D006115 ORTHO05D007528 5.1e-43 178.3 181 60.8
MELO3C018748.2 Cucumis melo HOM05D006115 ORTHO05D007528 5.1e-43 178.3 181 59.7
Solyc07g054290.1 Solanum lycopersicum HOM05D006115 ORTHO05D007528 5.1e-43 178.3 180 58.9
unitig_26.g9943 Utricularia gibba HOM05D006115 ORTHO05D007528 5.1e-43 178.3 179 59.8
Nitab4.5_0001090g0130 Nicotiana tabacum HOM05D006115 ORTHO05D007528 6.6e-43 177.9 178 61.2
CsaV3_7G004300 Cucumis sativus L. HOM05D006115 ORTHO05D007528 8.7e-43 177.6 181 59.7
THA.LOC104827374 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 1.1e-42 177.2 133 68.4
Gohir.A01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 2.5e-42 176.0 181 58.6
Os03g0333400 Oryza sativa ssp. japonica HOM05D006115 ORTHO05D007528 2.5e-42 176.0 165 61.2
Sed0009578 Sechium edule HOM05D006115 ORTHO05D007528 3.3e-42 175.6 181 61.3
Sopen07g028230 Solanum pennellii HOM05D006115 ORTHO05D007528 3.3e-42 175.6 180 59.4
Aa31LG1G20930 Aethionema arabicum HOM05D006115 ORTHO05D007528 4.3e-42 175.3 178 60.1
Actinidia09875 Actinidia chinensis HOM05D006115 ORTHO05D007528 5.6e-42 174.9 116 76.7
HanXRQChr17g0542591 Helianthus annuus HOM05D006115 ORTHO05D007528 5.6e-42 174.9 179 61.5
Lj8P115T48 Lonicera japonica HOM05D006115 ORTHO05D007528 5.6e-42 174.9 115 78.3
PGSC0003DMG400018360 Solanum tuberosum HOM05D006115 ORTHO05D007528 5.6e-42 174.9 180 58.9
BolC8t46868H Brassica oleracea HOM05D006115 ORTHO05D007528 7.3e-42 174.5 152 63.8
CDE05G3372 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 7.3e-42 174.5 181 58.6
FAN05G1351 Fragaria x ananassa HOM05D006115 ORTHO05D007528 7.3e-42 174.5 178 58.4
Sed0024793 Sechium edule HOM05D006115 ORTHO05D007528 9.6e-42 174.1 179 60.9
Oeu040003.1 Olea europaea HOM05D006115 ORTHO05D007528 1.6e-41 173.3 180 58.3
Lj1P733T48 Lonicera japonica HOM05D006115 ORTHO05D007528 2.8e-41 172.6 124 73.4
Rhsim06G0148500 Rhododendron simsii HOM05D006115 ORTHO05D007528 3.6e-41 172.2 176 59.1
BcaC07g36953 Brassica carinata HOM05D006115 ORTHO05D007528 6.2e-41 171.4 175 58.9
C08p00700 Brassica napus HOM05D006115 ORTHO05D007528 6.2e-41 171.4 175 58.9
THA.LOC104801178 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 6.2e-41 171.4 115 74.8
BolC5t28981H Brassica oleracea HOM05D006115 ORTHO05D007528 8.1e-41 171.0 166 59.0
Sc12g0002830 Simmondsia chinensis HOM05D006115 ORTHO05D007528 8.1e-41 171.0 103 83.5
BcaB02g06915 Brassica carinata HOM05D006115 ORTHO05D007528 1.1e-40 170.6 174 58.6
A10p02120 Brassica napus HOM05D006115 ORTHO05D007528 1.1e-40 170.6 166 59.0
Glyma.12G202500 Glycine max HOM05D006115 ORTHO05D007528 1.1e-40 170.6 178 61.2
Gohir.A12G137300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.1e-40 170.6 177 58.8
MSTRG.12305 Avicennia marina HOM05D006115 ORTHO05D007528 1.4e-40 170.2 179 59.8
Gohir.D12G141300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.4e-40 170.2 177 58.8
BcaC05g24519 Brassica carinata HOM05D006115 ORTHO05D007528 1.8e-40 169.9 166 59.0
C05p02030 Brassica napus HOM05D006115 ORTHO05D007528 1.8e-40 169.9 166 59.0
Gorai.008G152600 Gossypium raimondii HOM05D006115 ORTHO05D007528 1.8e-40 169.9 177 58.8
Lsat_1_v5_gn_3_39480 Lactuca sativa HOM05D006115 ORTHO05D007528 1.8e-40 169.9 178 59.6
TPR.G35547 Trifolium pratense HOM05D006115 ORTHO05D007528 1.8e-40 169.9 180 61.1
AT1G03600 Arabidopsis thaliana HOM05D006115 ORTHO05D007528 2.4e-40 169.5 156 62.2
CARHR002940 Cardamine hirsuta HOM05D006115 ORTHO05D007528 2.4e-40 169.5 181 58.0
AL1G13100 Arabidopsis lyrata HOM05D006115 ORTHO05D007528 4.0e-40 168.7 181 56.9
A08p37300 Brassica napus HOM05D006115 ORTHO05D007528 4.0e-40 168.7 177 59.9
Carub.0001s0272 Capsella rubella HOM05D006115 ORTHO05D007528 9.0e-40 167.5 168 60.7
Sp1g02510 Schrenkiella parvula HOM05D006115 ORTHO05D007528 1.5e-39 166.8 181 56.4
Zm00001eb015950 Zea mays HOM05D006115 ORTHO05D007528 2.0e-39 166.4 169 60.4
SGA_v2.0_scaffold356G49787 Striga asiatica HOM05D006115 ORTHO05D007528 2.6e-39 166.0 175 60.0
Zm00001eb395230 Zea mays HOM05D006115 ORTHO05D007528 2.6e-39 166.0 130 68.5
MSTRG.14200 Avicennia marina HOM05D006115 ORTHO05D007528 4.4e-39 165.2 181 58.0
BraA08t35627Z Brassica rapa HOM05D006115 ORTHO05D007528 4.4e-39 165.2 177 58.2
Dinv03833 Davidia involucrata HOM05D006115 ORTHO05D007528 4.4e-39 165.2 171 60.2
Migut.H01055 Erythranthe guttata HOM05D006115 ORTHO05D007528 5.8e-39 164.9 180 56.1
Thhalv10008901m.g Eutrema salsugineum HOM05D006115 ORTHO05D007528 2.2e-38 162.9 182 55.5
Glyma.13G299200 Glycine max HOM05D006115 ORTHO05D007528 2.2e-38 162.9 177 60.5
HPP92_017628 Vanilla planifolia HOM05D006115 ORTHO05D007528 1.1e-37 160.6 160 59.4
BraA10t42481Z Brassica rapa HOM05D006115 ORTHO05D007528 3.2e-37 159.1 170 58.8
TWI18G1016 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 4.2e-37 158.7 179 55.3
ECA246G1074 Erigeron canadensis HOM05D006115 ORTHO05D007528 2.3e-35 152.9 178 55.1
Duzib052G1052 Durio zibethinus HOM05D006115 ORTHO05D007528 7.3e-34 147.9 172 53.5
SEGI_04908 Sequoiadendron giganteum HOM05D006115 ORTHO05D007528 2.4e-32 142.9 141 57.4
Mapoly0049s0056 Marchantia polymorpha HOM05D006115 ORTHO05D007528 9.0e-32 141.0 169 48.5
Ca_01513_v3 Cicer arietinum L. HOM05D006115 ORTHO05D007528 1.5e-31 140.2 84 83.3
SMO364G0930 Selaginella moellendorffii HOM05D006115 ORTHO05D007528 4.5e-31 138.7 136 55.1
Pp3c9_26020 Physcomitrium patens HOM05D006115 ORTHO05D007528 9.3e-29 131.0 177 46.9
Actinidia11067 Actinidia chinensis HOM05D006115 ORTHO05D007528 4.3e-26 122.1 145 57.2
AagrBONN_evm.TU.Sc2ySwM_228.954 Anthoceros agrestis HOM05D006115 ORTHO05D007528 7.4e-26 121.3 167 44.9
CBR_g50764 Chara braunii HOM05D006115 ORTHO05D007528 1.6e-25 120.2 169 46.2
CDE05G0569 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 4.0e-24 115.5 148 51.4
MCO14G469 Micromonas commoda HOM05D006115 ORTHO05D007528 1.8e-19 100.1 142 39.4
Cre05.g243800 Chlamydomonas reinhardtii HOM05D006115 ORTHO05D007528 8.7e-19 97.8 177 39.5
TAR627G0228 Trochodendron aralioides HOM05D006115 ORTHO05D007528 6.2e-17 91.7 133 51.1
ATR0693G305 Amborella trichopoda HOM05D006115 ORTHO05D007528 1.1e-16 90.9 141 44.7
Dinv23684 Davidia involucrata HOM05D006115 ORTHO05D007528 2.5e-13 79.7 170 40.6
C05p03740 Brassica napus HOM05D007072 ORTHO05D008841 3.8e-06 55.8 115 28.7
Carub.0001s0473 Capsella rubella HOM05D007072 ORTHO05D008841 6.5e-06 55.1 116 27.6
Ciclev10005922m.g Citrus clementina HOM05D007072 ORTHO05D008841 8.5e-06 54.7 101 29.7
Thhalv10008840m.g Eutrema salsugineum HOM05D007072 ORTHO05D008841 8.5e-06 54.7 115 28.7
Sp1g04270 Schrenkiella parvula HOM05D007072 ORTHO05D008841 8.5e-06 54.7 115 28.7


User provided reference genes

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