Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.08g215840 Amaranthus hybridus HOM05D006704 ORTHO05D008635 1.2e-233 812.8 395 100.0
EL10Ac7g15806 Beta vulgaris HOM05D006704 ORTHO05D008635 2.0e-172 609.4 396 77.0
AUR62009778 Chenopodium quinoa HOM05D006704 ORTHO05D008635 1.3e-163 580.1 393 73.5
AUR62039223 Chenopodium quinoa HOM05D006704 ORTHO05D008635 1.3e-163 580.1 334 82.3
Hund20877 Selenicereus undatus HOM05D006704 ORTHO05D008635 1.2e-153 547.0 397 69.3
Dinv29464 Davidia involucrata HOM05D006704 ORTHO05D008635 3.1e-141 505.8 402 64.2
Manes.11G160500 Manihot esculenta HOM05D006704 ORTHO05D008635 2.0e-140 503.1 342 70.5
GSVIVG01036154001 Vitis vinifera HOM05D006704 ORTHO05D008635 1.4e-138 496.9 341 70.7
COL.COLO4_19912 Corchorus olitorius HOM05D006704 ORTHO05D008635 9.3e-138 494.2 396 63.4
Gorai.009G086600 Gossypium raimondii HOM05D006704 ORTHO05D008635 9.3e-138 494.2 323 71.8
TWI31G0547 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 1.2e-137 493.8 367 65.9
Gohir.A05G081700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 1.6e-137 493.4 323 71.8
Gohir.D05G084700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 3.5e-137 492.3 323 71.8
QL01p012560 Quercus lobata HOM05D006704 ORTHO05D008635 3.5e-137 492.3 410 60.5
Potri.004G184400 Populus trichocarpa HOM05D006704 ORTHO05D008635 6.0e-137 491.5 325 71.4
PGSC0003DMG400007144 Solanum tuberosum HOM05D006704 ORTHO05D008635 6.0e-137 491.5 393 63.6
Ciclev10028571m.g Citrus clementina HOM05D006704 ORTHO05D008635 1.3e-136 490.3 369 64.5
Hma1.2p1_0305F.1_g119670 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 1.8e-136 490.0 347 69.5
Solyc06g074380.3 Solanum lycopersicum HOM05D006704 ORTHO05D008635 2.3e-136 489.6 327 70.6
Glyma.11G184500 Glycine max HOM05D006704 ORTHO05D008635 3.0e-136 489.2 397 63.0
PGR119G0959 Punica granatum HOM05D006704 ORTHO05D008635 3.0e-136 489.2 396 63.1
Duzib170G0143 Durio zibethinus HOM05D006704 ORTHO05D008635 5.1e-136 488.4 395 62.3
Atru.chr3.3296 Acer truncatum HOM05D006704 ORTHO05D008635 1.1e-135 487.3 396 63.4
Lj3g0010910 Lotus japonicus HOM05D006704 ORTHO05D008635 1.5e-135 486.9 395 61.3
Psat7g188440 Pisum sativum HOM05D006704 ORTHO05D008635 2.5e-135 486.1 322 70.5
RcHm_v2.0_Chr5g0044201 Rosa chinensis HOM05D006704 ORTHO05D008635 2.5e-135 486.1 400 61.5
Sopen06g030840 Solanum pennellii HOM05D006704 ORTHO05D008635 5.7e-135 485.0 327 70.3
TPR.G17210 Trifolium pratense HOM05D006704 ORTHO05D008635 9.7e-135 484.2 321 71.0
Ca_19394_v3 Cicer arietinum L. HOM05D006704 ORTHO05D008635 1.3e-134 483.8 322 70.2
SalBow6G4963 Salvia bowleyana HOM05D006704 ORTHO05D008635 3.7e-134 482.3 397 61.7
Cfa010042 Carpinus fangiana HOM05D006704 ORTHO05D008635 4.8e-134 481.9 321 70.7
CSS0007169 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 1.1e-133 480.7 331 68.9
CSS0018673 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 1.1e-133 480.7 331 68.9
Rhsim13G0110100 Rhododendron simsii HOM05D006704 ORTHO05D008635 1.1e-133 480.7 343 67.9
Sabra04G0124100 Salix brachista HOM05D006704 ORTHO05D008635 1.1e-133 480.7 325 70.2
FvH4_3g24630 Fragaria vesca HOM05D006704 ORTHO05D008635 1.8e-133 479.9 403 60.3
Thecc.09G286000 Theobroma cacao HOM05D006704 ORTHO05D008635 1.8e-133 479.9 395 61.8
Sed0027356 Sechium edule HOM05D006704 ORTHO05D008635 5.3e-133 478.4 335 68.7
VMungo1127G0699 Vigna mungo HOM05D006704 ORTHO05D008635 1.2e-132 477.2 399 61.9
vmacro03306 Vaccinium macrocarpon HOM05D006704 ORTHO05D008635 2.0e-132 476.5 337 67.1
Nitab4.5_0015718g0010 Nicotiana tabacum HOM05D006704 ORTHO05D008635 7.6e-132 474.6 418 58.4
Nn6g34957 Nelumbo nucifera HOM05D006704 ORTHO05D008635 1.3e-131 473.8 398 61.3
arahy.Tifrunner.gnm1.ann1.JHI8LQ Arachis hypogaea HOM05D006704 ORTHO05D008635 2.2e-131 473.0 323 68.4
TAR633G0569 Trochodendron aralioides HOM05D006704 ORTHO05D008635 2.2e-131 473.0 406 59.6
arahy.Tifrunner.gnm1.ann1.GMPU9C Arachis hypogaea HOM05D006704 ORTHO05D008635 3.8e-131 472.2 323 68.4
Medtr4g053410 Medicago truncatula HOM05D006704 ORTHO05D008635 3.8e-131 472.2 394 60.9
DCAR_006157 Daucus carota HOM05D006704 ORTHO05D008635 6.5e-131 471.5 393 60.8
Glyma.12G087800 Glycine max HOM05D006704 ORTHO05D008635 8.5e-131 471.1 395 60.8
MELO3C004818.2 Cucumis melo HOM05D006704 ORTHO05D008635 1.1e-130 470.7 401 60.8
ClCG01G012900 Citrullus lanatus HOM05D006704 ORTHO05D008635 1.9e-130 469.9 404 61.1
CsaV3_1G014420 Cucumis sativus L. HOM05D006704 ORTHO05D008635 1.9e-130 469.9 396 61.4
CAN.G919.21 Capsicum annuum HOM05D006704 ORTHO05D008635 2.5e-130 469.5 393 61.6
Nitab4.5_0002002g0020 Nicotiana tabacum HOM05D006704 ORTHO05D008635 2.5e-130 469.5 411 59.1
Aqoxy2G01240 Aquilegia oxysepala HOM05D006704 ORTHO05D008635 3.2e-130 469.2 320 66.6
MBI17_g08127_MAGBIO Magnolia biondii HOM05D006704 ORTHO05D008635 3.2e-130 469.2 329 67.8
Lalb_Chr03g0028021 Lupinus albus HOM05D006704 ORTHO05D008635 5.5e-130 468.4 400 60.2
SGA_v2.0_scaffold22G09877 Striga asiatica HOM05D006704 ORTHO05D008635 9.4e-130 467.6 399 60.7
Cc01_g09380 Coffea canephora HOM05D006704 ORTHO05D008635 3.6e-129 465.7 338 65.7
CANSAT54G0988 Cannabis sativa HOM05D006704 ORTHO05D008635 4.6e-129 465.3 394 59.9
Phvul.011G092800 Phaseolus vulgaris HOM05D006704 ORTHO05D008635 6.1e-129 464.9 321 67.9
CDE06G2417 Ceratophyllum demersum HOM05D006704 ORTHO05D008635 7.9e-129 464.5 394 59.4
Lsat_1_v5_gn_6_40481 Lactuca sativa HOM05D006704 ORTHO05D008635 1.8e-128 463.4 394 60.9
FAN11G2081 Fragaria x ananassa HOM05D006704 ORTHO05D008635 3.0e-128 462.6 309 69.3
Eucgr.I00893 Eucalyptus grandis HOM05D006704 ORTHO05D008635 3.9e-128 462.2 396 60.6
PSO339G4200 Papaver somniferum HOM05D006704 ORTHO05D008635 6.7e-128 461.5 338 65.4
MD03G1142000 Malus domestica HOM05D006704 ORTHO05D008635 1.1e-127 460.7 397 59.4
FAN21G3586 Fragaria x ananassa HOM05D006704 ORTHO05D008635 1.5e-127 460.3 307 69.7
Sc12g0004410 Simmondsia chinensis HOM05D006704 ORTHO05D008635 2.5e-127 459.5 293 75.1
PSO384G3226 Papaver somniferum HOM05D006704 ORTHO05D008635 5.7e-127 458.4 339 64.3
AL4G22810 Arabidopsis lyrata HOM05D006704 ORTHO05D008635 1.7e-126 456.8 333 66.4
BcaC02g08239 Brassica carinata HOM05D006704 ORTHO05D008635 2.2e-126 456.4 393 59.5
C04p56860 Brassica napus HOM05D006704 ORTHO05D008635 3.7e-126 455.7 393 59.8
MSTRG.18751 Avicennia marina HOM05D006704 ORTHO05D008635 4.8e-126 455.3 397 59.9
CARHR121470 Cardamine hirsuta HOM05D006704 ORTHO05D008635 4.1e-125 452.2 393 58.8
Nitab4.5_0002002g0030 Nicotiana tabacum HOM05D006704 ORTHO05D008635 4.1e-125 452.2 393 58.3
BolC4t27219H Brassica oleracea HOM05D006704 ORTHO05D008635 1.5e-124 450.3 393 60.1
Peaxi162Scf00091g00118 Petunia axillaris HOM05D006704 ORTHO05D008635 1.5e-124 450.3 327 66.1
Thhalv10016700m.g Eutrema salsugineum HOM05D006704 ORTHO05D008635 2.0e-124 449.9 393 59.5
CiPaw.13G137600 Carya illinoinensis HOM05D006704 ORTHO05D008635 2.6e-124 449.5 313 67.7
Migut.D02353 Erythranthe guttata HOM05D006704 ORTHO05D008635 2.6e-124 449.5 396 58.6
Sp4g10410 Schrenkiella parvula HOM05D006704 ORTHO05D008635 4.5e-124 448.7 395 58.5
Carub.0004s0825 Capsella rubella HOM05D006704 ORTHO05D008635 5.9e-124 448.4 398 58.8
HanXRQChr12g0364591 Helianthus annuus HOM05D006704 ORTHO05D008635 5.9e-124 448.4 399 59.6
ECA233G1041 Erigeron canadensis HOM05D006704 ORTHO05D008635 7.7e-124 448.0 372 61.0
AT2G27590 Arabidopsis thaliana HOM05D006704 ORTHO05D008635 2.2e-123 446.4 395 59.7
THA.LOC104800539 Tarenaya hassleriana HOM05D006704 ORTHO05D008635 5.0e-123 445.3 410 57.6
Aa31LG5G8320 Aethionema arabicum HOM05D006704 ORTHO05D008635 1.9e-122 443.4 396 58.1
A04p21040 Brassica napus HOM05D006704 ORTHO05D008635 5.5e-122 441.8 393 58.8
BraA04t17672Z Brassica rapa HOM05D006704 ORTHO05D008635 1.2e-121 440.7 393 58.8
BcaB06g28156 Brassica carinata HOM05D006704 ORTHO05D008635 4.7e-121 438.7 395 58.7
Haze_23402 Corylus avellana HOM05D006704 ORTHO05D008635 1.5e-119 433.7 432 52.5
Lj2A980T13 Lonicera japonica HOM05D006704 ORTHO05D008635 3.1e-117 426.0 310 63.5
Os01g0858700 Oryza sativa ssp. japonica HOM05D006704 ORTHO05D008635 5.3e-117 425.2 321 61.4
unitig_37.g12893 Utricularia gibba HOM05D006704 ORTHO05D008635 9.1e-117 424.5 399 56.6
Zm00001eb147310 Zea mays HOM05D006704 ORTHO05D008635 1.6e-113 413.7 398 52.8
HPP92_000003 Vanilla planifolia HOM05D006704 ORTHO05D008635 3.0e-112 409.5 398 55.3
Prupe.6G127300 Prunus persica HOM05D006704 ORTHO05D008635 1.9e-106 390.2 285 65.3
SEGI_32150 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 7.2e-106 388.3 407 51.8
ATR0820G138 Amborella trichopoda HOM05D006704 ORTHO05D008635 3.6e-105 386.0 312 59.9
Cpa.g.sc32.105 Carica papaya HOM05D006704 ORTHO05D008635 3.0e-104 382.9 331 61.0
Mapoly0047s0027 Marchantia polymorpha HOM05D006704 ORTHO05D008635 1.1e-93 347.8 363 50.7
FAN16G1713 Fragaria x ananassa HOM05D006704 ORTHO05D008635 2.7e-92 343.2 246 65.0
Actinidia07237 Actinidia chinensis HOM05D006704 ORTHO05D008635 4.5e-92 342.4 344 53.5
AagrBONN_evm.TU.Sc2ySwM_228.5549 Anthoceros agrestis HOM05D006704 ORTHO05D008635 5.0e-91 339.0 394 48.7
SMO200G0095 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 4.0e-88 329.3 312 51.3
SMO079G0003 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 5.2e-88 328.9 312 51.6
Hma1.2p1_0305F.1_g119660 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 5.4e-85 318.9 217 71.0
TWI79G0085 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 5.4e-37 159.5 99 67.7
Oeu031485.1 Olea europaea HOM05D006704 ORTHO05D008635 2.8e-33 147.1 396 33.8
MD03G1142200 Malus domestica HOM05D006704 ORTHO05D008635 1.5e-31 141.4 92 68.5
VMungo0464G0466 Vigna mungo HOM05D006704 ORTHO05D000044 3.7e-25 120.2 159 47.8
Actinidia24205 Actinidia chinensis HOM05D006704 ORTHO05D008635 7.9e-20 102.4 64 68.8
Cpa.g.sc32.104 Carica papaya HOM05D006704 ORTHO05D008635 3.9e-19 100.1 76 56.6
Cfa010043 Carpinus fangiana HOM05D006704 ORTHO05D008635 2.2e-17 94.4 48 89.6
SEGI_14445 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 5.9e-15 86.3 123 47.2
Migut.D01870 Erythranthe guttata HOM05D006704 ORTHO05D008635 2.2e-14 84.3 66 57.6
QL02p006829 Quercus lobata HOM05D006704 ORTHO05D004198 1.8e-11 74.7 53 64.2
MD11G1162700 Malus domestica HOM05D006704 ORTHO05D008635 1.7e-06 58.2 127 30.7


User provided reference genes

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