Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.08g215800 Amaranthus hybridus HOM05D005062 ORTHO05D006410 2.0e-226 788.9 428 100.0
AUR62009772 Chenopodium quinoa HOM05D005062 ORTHO05D006410 1.5e-136 490.3 437 65.7
EL10Ac7g15813 Beta vulgaris HOM05D005062 ORTHO05D006410 9.5e-136 487.6 426 65.5
CiPaw.14G101300 Carya illinoinensis HOM05D005062 ORTHO05D006410 3.9e-113 412.5 371 57.1
Sc12g0004460 Simmondsia chinensis HOM05D005062 ORTHO05D006410 4.1e-107 392.5 401 54.9
AUR62039218 Chenopodium quinoa HOM05D005062 ORTHO05D006410 1.5e-104 384.0 360 60.6
GSVIVG01036146001 Vitis vinifera HOM05D005062 ORTHO05D006410 3.3e-104 382.9 374 55.9
Nn2g14130 Nelumbo nucifera HOM05D005062 ORTHO05D006410 2.1e-103 380.2 376 56.6
Cfa010314 Carpinus fangiana HOM05D005062 ORTHO05D006410 5.2e-102 375.6 373 55.8
TAR623G1543 Trochodendron aralioides HOM05D005062 ORTHO05D006410 2.0e-101 373.6 395 55.2
CiPaw.13G040200 Carya illinoinensis HOM05D005062 ORTHO05D006410 4.4e-101 372.5 364 56.3
PGR044G2170 Punica granatum HOM05D005062 ORTHO05D006410 4.9e-100 369.0 356 57.3
Eucgr.B03869 Eucalyptus grandis HOM05D005062 ORTHO05D006410 6.4e-100 368.6 340 55.3
MD02G1255900 Malus domestica HOM05D005062 ORTHO05D006410 4.2e-99 365.9 338 58.0
FvH4_7g05590 Fragaria vesca HOM05D005062 ORTHO05D006410 1.3e-97 360.9 389 52.7
FAN01G3081 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.3e-97 360.9 389 52.7
Cpa.g.sc183.10 Carica papaya HOM05D005062 ORTHO05D006410 2.3e-97 360.1 355 54.9
Dinv11848 Davidia involucrata HOM05D005062 ORTHO05D006410 2.3e-97 360.1 346 56.1
Eucgr.J00992 Eucalyptus grandis HOM05D005062 ORTHO05D006410 2.3e-97 360.1 358 54.5
RcHm_v2.0_Chr1g0332571 Rosa chinensis HOM05D005062 ORTHO05D006410 8.7e-97 358.2 355 55.5
FAN10G1073 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.5e-96 357.5 389 52.4
PGR102G2753 Punica granatum HOM05D005062 ORTHO05D006410 2.5e-96 356.7 370 52.2
Duzib106G1045 Durio zibethinus HOM05D005062 ORTHO05D006410 4.3e-96 355.9 384 51.8
CSS0050380 Camellia sinensis var. sinensis HOM05D005062 ORTHO05D006410 9.6e-96 354.8 343 54.2
DCAR_006341 Daucus carota HOM05D005062 ORTHO05D006410 8.1e-95 351.7 335 54.6
Atru.chr12.1008 Acer truncatum HOM05D005062 ORTHO05D006410 1.4e-94 350.9 393 53.4
Aqoxy2G01214 Aquilegia oxysepala HOM05D005062 ORTHO05D006410 1.4e-94 350.9 336 55.4
THA.LOC104824209 Tarenaya hassleriana HOM05D005062 ORTHO05D006410 1.4e-94 350.9 347 53.3
Nitab4.5_0010225g0010 Nicotiana tabacum HOM05D005062 ORTHO05D006410 1.8e-94 350.5 415 49.9
Manes.10G058650 Manihot esculenta HOM05D005062 ORTHO05D006410 4.0e-94 349.4 342 55.0
QL04p046667 Quercus lobata HOM05D005062 ORTHO05D006410 4.0e-94 349.4 396 50.3
Sabra08G0014600 Salix brachista HOM05D005062 ORTHO05D006410 6.9e-94 348.6 395 50.6
Lsat_1_v5_gn_8_23960 Lactuca sativa HOM05D005062 ORTHO05D006410 1.2e-93 347.8 398 50.5
HanXRQChr08g0217771 Helianthus annuus HOM05D005062 ORTHO05D006410 2.0e-93 347.1 370 52.2
FAN23G1954 Fragaria x ananassa HOM05D005062 ORTHO05D006410 3.4e-93 346.3 368 53.3
FAN23G1474 Fragaria x ananassa HOM05D005062 ORTHO05D006410 4.4e-93 345.9 335 56.7
ECA233G2289 Erigeron canadensis HOM05D005062 ORTHO05D006410 5.8e-93 345.5 328 56.4
GSVIVG01011284001 Vitis vinifera HOM05D005062 ORTHO05D006410 5.8e-93 345.5 389 51.7
Potri.008G021600 Populus trichocarpa HOM05D005062 ORTHO05D006410 7.6e-93 345.1 343 53.9
CSS0021342 Camellia sinensis var. sinensis HOM05D005062 ORTHO05D006410 9.9e-93 344.7 356 53.1
AL5G37480 Arabidopsis lyrata HOM05D005062 ORTHO05D006410 1.3e-92 344.4 332 55.4
AT3G56160 Arabidopsis thaliana HOM05D005062 ORTHO05D006410 1.3e-92 344.4 332 55.1
CsaV3_2G034960 Cucumis sativus L. HOM05D005062 ORTHO05D006410 1.3e-92 344.4 337 54.6
Sp5g06340 Schrenkiella parvula HOM05D005062 ORTHO05D006410 1.7e-92 344.0 335 54.3
Oeu026579.1 Olea europaea HOM05D005062 ORTHO05D006410 2.2e-92 343.6 368 52.7
Solyc07g014740.3 Solanum lycopersicum HOM05D005062 ORTHO05D006410 4.9e-92 342.4 333 55.3
CDE06G2329 Ceratophyllum demersum HOM05D005062 ORTHO05D006410 8.4e-92 341.7 402 48.8
Migut.F01613 Erythranthe guttata HOM05D005062 ORTHO05D006410 1.1e-91 341.3 347 54.5
CAN.G54.5 Capsicum annuum HOM05D005062 ORTHO05D006410 2.4e-91 340.1 333 55.9
Lj5g0026270 Lotus japonicus HOM05D005062 ORTHO05D006410 2.4e-91 340.1 329 56.5
Medtr1g050462 Medicago truncatula HOM05D005062 ORTHO05D006410 2.4e-91 340.1 355 53.5
MSTRG.8110 Avicennia marina HOM05D005062 ORTHO05D006410 4.2e-91 339.3 402 49.8
Lalb_Chr19g0129181 Lupinus albus HOM05D005062 ORTHO05D006410 5.4e-91 339.0 339 54.6
Gorai.008G099000 Gossypium raimondii HOM05D005062 ORTHO05D006410 7.1e-91 338.6 344 53.2
Os02g0531200 Oryza sativa ssp. japonica HOM05D005062 ORTHO05D006410 1.6e-90 337.4 347 53.0
FAN06G1220 Fragaria x ananassa HOM05D005062 ORTHO05D006410 2.1e-90 337.0 374 51.9
ATR0081G026 Amborella trichopoda HOM05D005062 ORTHO05D006410 2.7e-90 336.7 366 49.5
Ca_12731_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 2.7e-90 336.7 361 52.6
Gohir.A12G092722 Gossypium hirsutum HOM05D005062 ORTHO05D006410 2.7e-90 336.7 344 53.2
BcaC07g39930 Brassica carinata HOM05D002435 ORTHO05D002550 3.5e-90 336.3 335 53.4
BolC8t50765H Brassica oleracea HOM05D002435 ORTHO05D002550 3.5e-90 336.3 335 53.4
A09p49130 Brassica napus HOM05D002435 ORTHO05D002550 7.8e-90 335.1 350 52.3
BraA09t40366Z Brassica rapa HOM05D005062 ORTHO05D006410 7.8e-90 335.1 350 52.3
BcaB01g00026 Brassica carinata HOM05D002435 ORTHO05D002550 1.0e-89 334.7 335 53.4
Glyma.10G111800 Glycine max HOM05D005062 ORTHO05D006410 1.7e-89 334.0 337 53.7
Lsat_1_v5_gn_2_104621 Lactuca sativa HOM05D005062 ORTHO05D006410 1.7e-89 334.0 342 51.8
C08p31440 Brassica napus HOM05D002435 ORTHO05D002550 3.9e-89 332.8 336 53.3
Phvul.007G247700 Phaseolus vulgaris HOM05D005062 ORTHO05D006410 3.9e-89 332.8 330 55.5
Peaxi162Scf00235g10011 Petunia axillaris HOM05D005062 ORTHO05D006410 5.1e-89 332.4 384 50.0
CiPaw.14G101100 Carya illinoinensis HOM05D005062 ORTHO05D006410 1.1e-88 331.3 394 49.0
AUR62034504 Chenopodium quinoa HOM05D005062 ORTHO05D006410 1.1e-88 331.3 366 49.7
arahy.Tifrunner.gnm1.ann1.ZAGE2X Arachis hypogaea HOM05D005062 ORTHO05D006410 1.5e-88 330.9 337 53.1
SalBow6G6867 Salvia bowleyana HOM05D005062 ORTHO05D006410 4.3e-88 329.3 347 53.3
arahy.Tifrunner.gnm1.ann1.BZ57JC Arachis hypogaea HOM05D005062 ORTHO05D006410 1.3e-87 327.8 332 53.3
Cc02_g09770 Coffea canephora HOM05D005062 ORTHO05D006410 1.6e-87 327.4 346 51.4
HanXRQChr11g0342201 Helianthus annuus HOM05D005062 ORTHO05D006410 3.6e-87 326.2 331 51.1
FAN23G2695 Fragaria x ananassa HOM05D005062 ORTHO05D006410 2.0e-85 320.5 413 47.5
HPP92_007815 Vanilla planifolia HOM05D005062 ORTHO05D006410 3.4e-85 319.7 371 48.2
HanXRQChr08g0217571 Helianthus annuus HOM05D005062 ORTHO05D006410 4.5e-85 319.3 340 48.5
ECA238G3155 Erigeron canadensis HOM05D005062 ORTHO05D006410 9.9e-85 318.2 378 47.6
Actinidia18593 Actinidia chinensis HOM05D000444 ORTHO05D000489 1.7e-84 317.4 357 51.3
Thhalv10006005m.g Eutrema salsugineum HOM05D005062 ORTHO05D006410 2.4e-83 313.5 319 53.0
Rhsim03G0099700 Rhododendron simsii HOM05D005062 ORTHO05D006410 2.7e-82 310.1 435 44.6
FAN03G1004 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.1e-80 304.7 438 45.4
Sed0016949 Sechium edule HOM05D005062 ORTHO05D006410 2.2e-76 290.4 282 55.0
TPR.G10638 Trifolium pratense HOM05D005062 ORTHO05D006410 4.9e-76 289.3 274 58.0
Sopen07g005620 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-73 280.8 316 50.6
EL10As25g24233 Beta vulgaris HOM05D005062 ORTHO05D006410 5.0e-68 262.7 435 38.2
Thecc.10G106400 Theobroma cacao HOM05D005062 ORTHO05D006410 5.0e-68 262.7 289 50.5
Ah.09g232820 Amaranthus hybridus HOM05D005062 ORTHO05D006410 2.0e-61 240.7 355 42.5
Gohir.D12G091480 Gossypium hirsutum HOM05D005062 ORTHO05D006410 2.6e-61 240.4 249 52.2
Ciclev10032297m.g Citrus clementina HOM05D005062 ORTHO05D006410 3.8e-60 236.5 252 52.4
VMungo0720G3089 Vigna mungo HOM05D000444 ORTHO05D000489 3.8e-60 236.5 436 37.8
Hund06778 Selenicereus undatus HOM05D005062 ORTHO05D006410 7.2e-59 232.3 292 45.5
Zm00001eb242730 Zea mays HOM05D005062 ORTHO05D006410 1.0e-57 228.4 222 54.1
Mapoly0046s0115 Marchantia polymorpha HOM05D005062 ORTHO05D006410 3.0e-57 226.9 391 36.1
CARHR166310 Cardamine hirsuta HOM05D005062 ORTHO05D006410 7.4e-56 222.2 219 55.3
AagrBONN_evm.TU.Sc2ySwM_117.1142 Anthoceros agrestis HOM05D005062 ORTHO05D006410 8.2e-55 218.8 274 43.8
unitig_578.g16343 Utricularia gibba HOM05D005062 ORTHO05D006410 1.8e-54 217.6 342 40.4
Zm00001eb296300 Zea mays HOM05D005062 ORTHO05D006410 1.2e-53 214.9 213 54.9
Haze_23392 Corylus avellana HOM05D005062 ORTHO05D006410 1.1e-51 208.4 235 52.3
Lj3A928T57 Lonicera japonica HOM05D005062 ORTHO05D006410 7.2e-51 205.7 240 51.2
Prupe.2G079400 Prunus persica HOM05D005062 ORTHO05D006410 1.2e-50 204.9 215 53.5
Sc20g0001180 Simmondsia chinensis HOM05D003607 ORTHO05D004049 4.7e-50 203.0 207 53.1
MD02G1256100 Malus domestica HOM05D005062 ORTHO05D006410 3.9e-49 199.9 210 51.0
Carub.0005s2291 Capsella rubella HOM05D005062 ORTHO05D006410 8.8e-49 198.7 205 51.7
SGA_v2.0_scaffold13G06459 Striga asiatica HOM05D005062 ORTHO05D006410 5.7e-48 196.1 411 36.5
SMO347G0520 Selaginella moellendorffii HOM05D005062 ORTHO05D006410 2.8e-47 193.7 332 39.5
Haze_02484 Corylus avellana HOM05D005062 ORTHO05D006410 7.4e-40 169.1 240 45.0
Pp3c3_30210 Physcomitrium patens HOM05D005062 ORTHO05D006410 9.7e-40 168.7 199 46.7
QL01p012456 Quercus lobata HOM05D005062 ORTHO05D006410 3.1e-38 163.7 130 63.8
Duzib128G0173 Durio zibethinus HOM05D005062 ORTHO05D006410 1.0e-36 158.7 232 44.8
A02p12720 Brassica napus HOM05D005062 ORTHO05D006410 1.6e-34 151.4 227 42.7
MD02G1256200 Malus domestica HOM05D005062 ORTHO05D006410 1.8e-33 147.9 130 58.5
Cre09.g395700 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 4.0e-33 146.7 356 32.3
Psat6g129720 Pisum sativum HOM05D005062 ORTHO05D006410 1.2e-32 145.2 144 54.9
CBR_g48207 Chara braunii HOM05D000019 ORTHO05D000048 2.6e-32 144.1 214 36.4
Cfa010034 Carpinus fangiana HOM05D005062 ORTHO05D006410 4.4e-32 143.3 120 61.7
PRCOL_00003606 Prasinoderma coloniale HOM05D005062 ORTHO05D006410 4.4e-32 143.3 341 30.5
QL01p012462 Quercus lobata HOM05D005062 ORTHO05D006410 4.1e-30 136.7 139 48.9
Hund18750 Selenicereus undatus HOM05D005062 ORTHO05D006410 5.4e-30 136.3 159 50.3
MCO15G192 Micromonas commoda HOM05D005062 ORTHO05D006410 7.2e-27 125.9 342 27.8
Haze_02485 Corylus avellana HOM05D005062 ORTHO05D006410 1.5e-24 118.2 138 46.4
Cre12.g521950 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 1.3e-23 115.2 330 26.7
Cre09.g393250 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 2.8e-23 114.0 334 29.9
Cre06.g250450 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 3.7e-23 113.6 355 26.2
FAN01G2457 Fragaria x ananassa HOM05D005062 ORTHO05D006410 5.0e-20 103.2 82 68.3
COL.COLO4_24555 Corchorus olitorius HOM05D005062 ORTHO05D006410 8.6e-20 102.4 99 56.6
Ciclev10033893m.g Citrus clementina HOM05D005062 ORTHO05D006410 5.5e-19 99.8 93 59.1
Haze_23393 Corylus avellana HOM05D005062 ORTHO05D006410 2.1e-18 97.8 95 50.5
Cre02.g147450 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 8.0e-18 95.9 372 26.9
FAN06G3794 Fragaria x ananassa HOM05D005062 ORTHO05D006410 3.0e-17 94.0 108 51.9
FAN06G0036 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.2e-16 92.0 139 44.6
BraA02t06329Z Brassica rapa HOM05D005062 ORTHO05D006410 1.3e-15 88.6 75 60.0
GSVIVG01034679001 Vitis vinifera HOM05D005062 ORTHO05D006410 8.3e-15 85.9 74 66.2
COL.COLO4_24556 Corchorus olitorius HOM05D005062 ORTHO05D006410 3.2e-14 84.0 84 48.8
FvH4_7g05870 Fragaria vesca HOM05D005062 ORTHO05D006410 1.6e-13 81.6 132 43.2
SEGI_26426 Sequoiadendron giganteum HOM05D005062 ORTHO05D006410 1.0e-12 79.0 74 52.7
Lj3C928T13 Lonicera japonica HOM05D005062 ORTHO05D006410 1.3e-12 78.6 76 48.7
Dinv42565 Davidia involucrata HOM05D005062 ORTHO05D006410 5.0e-12 76.6 111 40.5
FAN01G2288 Fragaria x ananassa HOM05D005062 ORTHO05D006410 7.3e-11 72.8 42 81.0
ClCG02G008710 Citrullus lanatus HOM05D005062 ORTHO05D006410 1.2e-10 72.0 77 45.5
SEGI_01082 Sequoiadendron giganteum HOM05D005062 ORTHO05D006410 2.1e-10 71.2 51 74.5
RcHm_v2.0_Chr1g0332551 Rosa chinensis HOM05D005062 ORTHO05D006410 3.1e-09 67.4 72 48.6
Hma1.2p1_0165F.1_g073310 Hydrangea macrophylla HOM05D005062 ORTHO05D006410 4.4e-08 63.5 65 44.6
Ca_00262_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 5.8e-08 63.2 103 35.9
Hma1.2p1_1068F.1_g253985 Hydrangea macrophylla HOM05D005062 ORTHO05D006410 1.3e-07 62.0 58 48.3
Psat6g129760 Pisum sativum HOM05D005062 ORTHO05D006410 3.2e-06 57.4 97 34.0
RcHm_v2.0_Chr1g0332541 Rosa chinensis HOM05D005062 ORTHO05D006410 9.2e-06 55.8 59 47.5


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