Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.08g215320 Amaranthus hybridus HOM05D006841 ORTHO05D008607 9.5e-281 969.5 495 100.0
Ah.15g096690 Amaranthus hybridus HOM05D006841 ORTHO05D008607 2.8e-232 808.5 503 81.3
EL10Ac7g15887 Beta vulgaris HOM05D006841 ORTHO05D008607 8.4e-229 797.0 503 80.3
AUR62009700 Chenopodium quinoa HOM05D006841 ORTHO05D008607 1.3e-224 783.1 503 78.3
AUR62036246 Chenopodium quinoa HOM05D006841 ORTHO05D008607 9.0e-223 776.9 503 78.1
Hund05042 Selenicereus undatus HOM05D006841 ORTHO05D008607 1.1e-204 716.8 506 72.7
Sc06g0008150 Simmondsia chinensis HOM05D006841 ORTHO05D008607 4.4e-193 678.3 504 69.0
Prupe.6G052600 Prunus persica HOM05D006841 ORTHO05D008607 8.3e-184 647.5 506 64.8
CSS0042618 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 1.7e-181 639.8 508 64.2
Thecc.09G353800 Theobroma cacao HOM05D006841 ORTHO05D008607 3.6e-179 632.1 439 71.3
Atru.chr3.4145 Acer truncatum HOM05D006841 ORTHO05D008607 6.8e-178 627.9 498 63.9
MD03G1062600 Malus domestica HOM05D006841 ORTHO05D008607 8.8e-178 627.5 479 65.1
Dinv28672 Davidia involucrata HOM05D006841 ORTHO05D008607 3.4e-177 625.5 494 65.8
TAR369G0096 Trochodendron aralioides HOM05D006841 ORTHO05D008607 5.7e-177 624.8 472 66.7
MD11G1066200 Malus domestica HOM05D006841 ORTHO05D008607 7.5e-177 624.4 479 65.3
COL.COLO4_11072 Corchorus olitorius HOM05D006841 ORTHO05D008607 8.3e-176 620.9 457 67.2
TAR636G1839 Trochodendron aralioides HOM05D006841 ORTHO05D008607 1.2e-174 617.1 510 63.7
Manes.02G217600 Manihot esculenta HOM05D006841 ORTHO05D008607 2.0e-174 616.3 440 69.5
Potri.009G075200 Populus trichocarpa HOM05D006841 ORTHO05D008607 2.0e-174 616.3 481 65.3
QL01p039597 Quercus lobata HOM05D006841 ORTHO05D008607 2.7e-174 615.9 512 62.1
Eucgr.B02230 Eucalyptus grandis HOM05D006841 ORTHO05D008607 4.5e-174 615.1 440 69.3
Gorai.009G112400 Gossypium raimondii HOM05D006841 ORTHO05D008607 7.8e-174 614.4 457 67.2
Actinidia34467 Actinidia chinensis HOM05D006841 ORTHO05D008607 1.0e-173 614.0 510 61.8
Gohir.A05G108000 Gossypium hirsutum HOM05D006841 ORTHO05D008607 1.7e-173 613.2 457 67.0
Duzib170G1072 Durio zibethinus HOM05D006841 ORTHO05D008607 2.3e-173 612.8 508 63.0
Sabra09G0057100 Salix brachista HOM05D006841 ORTHO05D008607 2.3e-173 612.8 468 65.6
Ciclev10028251m.g Citrus clementina HOM05D006841 ORTHO05D008607 2.9e-173 612.5 468 66.0
RcHm_v2.0_Chr5g0070721 Rosa chinensis HOM05D006841 ORTHO05D008607 3.8e-173 612.1 476 64.3
Gohir.D05G108200 Gossypium hirsutum HOM05D006841 ORTHO05D008607 6.6e-173 611.3 457 67.0
CiPaw.14G056400 Carya illinoinensis HOM05D006841 ORTHO05D008607 1.1e-172 610.5 440 69.3
Duzib168G0722 Durio zibethinus HOM05D006841 ORTHO05D008607 1.1e-172 610.5 457 67.2
FAN21G2904 Fragaria x ananassa HOM05D006841 ORTHO05D008607 1.9e-172 609.8 474 64.3
FvH4_3g39290 Fragaria vesca HOM05D006841 ORTHO05D008607 2.5e-172 609.4 474 64.3
FAN25G3694 Fragaria x ananassa HOM05D006841 ORTHO05D008607 2.5e-172 609.4 474 64.3
FAN11G0941 Fragaria x ananassa HOM05D006841 ORTHO05D008607 3.3e-172 609.0 474 64.3
SalBow2G2391 Salvia bowleyana HOM05D006841 ORTHO05D008607 4.3e-172 608.6 465 65.4
PGR102G0989 Punica granatum HOM05D006841 ORTHO05D008607 1.6e-171 606.7 436 67.0
CiPaw.13G073200 Carya illinoinensis HOM05D006841 ORTHO05D008607 3.6e-171 605.5 513 61.0
arahy.Tifrunner.gnm1.ann1.1QT3IR Arachis hypogaea HOM05D006841 ORTHO05D008607 4.7e-171 605.1 440 66.8
CSS0014141 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 6.1e-171 604.7 508 61.4
CANSAT54G0320 Cannabis sativa HOM05D006841 ORTHO05D008607 8.0e-171 604.4 510 62.7
Haze_24381 Corylus avellana HOM05D006841 ORTHO05D008607 8.0e-171 604.4 540 59.6
arahy.Tifrunner.gnm1.ann1.UR06JS Arachis hypogaea HOM05D006841 ORTHO05D008607 1.8e-170 603.2 440 66.4
CsaV3_6G016010 Cucumis sativus L. HOM05D006841 ORTHO05D008607 1.8e-170 603.2 439 66.7
Glyma.18G059800 Glycine max HOM05D006841 ORTHO05D008607 1.8e-170 603.2 439 67.4
Solyc05g012140.3 Solanum lycopersicum HOM05D006841 ORTHO05D008607 1.8e-170 603.2 427 69.3
vmacro14612 Vaccinium macrocarpon HOM05D006841 ORTHO05D008607 1.8e-170 603.2 480 62.7
Sopen05g006930 Solanum pennellii HOM05D006841 ORTHO05D008607 2.3e-170 602.8 427 69.3
MSTRG.12683 Avicennia marina HOM05D006841 ORTHO05D008607 6.8e-170 601.3 439 67.2
PGSC0003DMG401028313 Solanum tuberosum HOM05D006841 ORTHO05D008607 1.2e-169 600.5 438 68.7
Glyma.11G167300 Glycine max HOM05D006841 ORTHO05D008607 2.0e-169 599.7 441 67.1
Peaxi162Scf01324g00238 Petunia axillaris HOM05D006841 ORTHO05D008607 2.0e-169 599.7 445 67.6
Sed0019546 Sechium edule HOM05D006841 ORTHO05D008607 2.0e-169 599.7 439 67.0
Phvul.006G071400 Phaseolus vulgaris HOM05D006841 ORTHO05D008607 2.6e-169 599.4 512 60.5
ClCG02G019390 Citrullus lanatus HOM05D006841 ORTHO05D008607 5.7e-169 598.2 512 60.2
TWI79G1747 Tripterygium wilfordii HOM05D006841 ORTHO05D008607 5.7e-169 598.2 440 68.0
Rhsim01G0239400 Rhododendron simsii HOM05D006841 ORTHO05D008607 7.5e-169 597.8 477 63.9
Lalb_Chr18g0051231 Lupinus albus HOM05D006841 ORTHO05D008607 2.2e-168 596.3 482 59.8
MELO3C026835.2 Cucumis melo HOM05D006841 ORTHO05D008607 4.9e-168 595.1 439 66.3
Oeu018490.1 Olea europaea HOM05D006841 ORTHO05D008607 6.4e-168 594.7 471 63.9
HanXRQChr01g0011601 Helianthus annuus HOM05D006841 ORTHO05D008607 1.8e-167 593.2 478 62.6
Medtr3g465390 Medicago truncatula HOM05D006841 ORTHO05D008607 2.4e-167 592.8 510 59.4
Psat5g157440 Pisum sativum HOM05D006841 ORTHO05D008607 4.1e-167 592.0 444 65.1
CAN.G707.10 Capsicum annuum HOM05D006841 ORTHO05D008607 1.6e-166 590.1 440 66.4
Lj6g0024894 Lotus japonicus HOM05D006841 ORTHO05D008607 5.9e-166 588.2 446 64.6
TPR.G32925 Trifolium pratense HOM05D006841 ORTHO05D008607 1.6e-163 580.1 515 58.1
Aqoxy1G01268 Aquilegia oxysepala HOM05D006841 ORTHO05D008607 1.2e-161 573.9 474 61.8
Migut.N00773 Erythranthe guttata HOM05D006841 ORTHO05D008607 2.2e-160 569.7 431 65.0
Aa31LG5G6580 Aethionema arabicum HOM05D006841 ORTHO05D008607 4.6e-158 562.0 448 61.4
Thhalv10016546m.g Eutrema salsugineum HOM05D006841 ORTHO05D008607 1.3e-157 560.5 504 56.3
unitig_94.g28363 Utricularia gibba HOM05D006841 ORTHO05D008607 3.0e-157 559.3 432 63.4
AT2G30100 Arabidopsis thaliana HOM05D006841 ORTHO05D008607 5.0e-157 558.5 483 58.0
THA.LOC104800754 Tarenaya hassleriana HOM05D006841 ORTHO05D008607 8.6e-157 557.8 479 58.2
PSO017G2874 Papaver somniferum HOM05D006841 ORTHO05D008607 1.5e-156 557.0 473 62.4
MBI15_g21765_MAGBIO Magnolia biondii HOM05D006841 ORTHO05D008607 2.5e-156 556.2 440 63.0
AL4G24870 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 3.3e-156 555.8 449 60.4
Lj2A1088G41 Lonicera japonica HOM05D006841 ORTHO05D008607 2.1e-155 553.1 453 63.8
CARHR123400 Cardamine hirsuta HOM05D006841 ORTHO05D008607 2.8e-155 552.7 485 57.1
PSO349G0316 Papaver somniferum HOM05D006841 ORTHO05D008607 4.7e-155 552.0 444 64.9
VMungo0540G0160 Vigna mungo HOM05D006841 ORTHO05D008607 6.2e-155 551.6 416 65.6
Lsat_1_v5_gn_5_173260 Lactuca sativa HOM05D006841 ORTHO05D008607 5.2e-154 548.5 449 61.2
Carub.0004s1120 Capsella rubella HOM05D006841 ORTHO05D008607 2.0e-153 546.6 480 57.3
ECA248G2088 Erigeron canadensis HOM05D006841 ORTHO05D008607 2.6e-153 546.2 428 64.0
Ca_14982_v3 Cicer arietinum L. HOM05D006841 ORTHO05D008607 9.9e-153 544.3 482 58.5
C04p58980 Brassica napus HOM05D006841 ORTHO05D008607 1.7e-152 543.5 451 59.2
Sp4g12660 Schrenkiella parvula HOM05D006841 ORTHO05D008607 8.3e-152 541.2 501 55.7
BolC4t27410H Brassica oleracea HOM05D006841 ORTHO05D008607 1.1e-151 540.8 451 59.0
BcaC02g08056 Brassica carinata HOM05D006841 ORTHO05D008607 9.2e-151 537.7 422 61.4
A04p22780 Brassica napus HOM05D006841 ORTHO05D008607 6.0e-150 535.0 449 58.4
BraA04t17817Z Brassica rapa HOM05D006841 ORTHO05D008607 1.0e-149 534.3 455 57.6
CDE06G2104 Ceratophyllum demersum HOM05D006841 ORTHO05D008607 3.3e-148 529.3 439 59.2
SGA_v2.0_scaffold104G30129 Striga asiatica HOM05D006841 ORTHO05D008607 4.3e-148 528.9 441 60.8
GSVIVG01024686001 Vitis vinifera HOM05D006841 ORTHO05D008607 3.5e-134 482.6 381 65.1
ATR0174G035 Amborella trichopoda HOM05D006841 ORTHO05D008607 1.0e-133 481.1 428 55.6
Cc01_g14600 Coffea canephora HOM05D006841 ORTHO05D008607 1.0e-133 481.1 398 60.6
Zm00001eb286480 Zea mays HOM05D006841 ORTHO05D008607 1.0e-133 481.1 420 55.7
Os05g0353300 Oryza sativa ssp. japonica HOM05D006841 ORTHO05D008607 3.3e-132 476.1 429 54.8
DCAR_007349 Daucus carota HOM05D006841 ORTHO05D008607 1.5e-129 467.2 354 63.8
AL59U10050 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 2.4e-114 416.8 388 55.4
Actinidia23875 Actinidia chinensis HOM05D006841 ORTHO05D008607 4.3e-108 396.0 289 68.5
SEGI_38470 Sequoiadendron giganteum HOM05D006841 ORTHO05D008607 2.2e-104 383.6 428 45.6
HPP92_025104 Vanilla planifolia HOM05D006841 ORTHO05D008607 2.1e-102 377.1 346 55.8
Hma1.2p1_0146F.1_g065520 Hydrangea macrophylla HOM05D006841 ORTHO05D008607 1.1e-95 354.8 256 67.6
Mapoly0068s0098 Marchantia polymorpha HOM05D006841 ORTHO05D008607 8.2e-83 312.0 417 41.2
CSS0012316 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 1.8e-77 294.3 423 41.8
Nn2g10947 Nelumbo nucifera HOM05D006841 ORTHO05D008607 2.5e-71 273.9 215 64.7
Nn2g13216 Nelumbo nucifera HOM05D006841 ORTHO05D008607 9.1e-66 255.4 178 71.9
SMO304G0125 Selaginella moellendorffii HOM05D006841 ORTHO05D008607 1.6e-62 244.6 418 34.2
Pp3c12_8330 Physcomitrium patens HOM05D006841 ORTHO05D008607 3.6e-62 243.4 426 34.5
Cpa.g.sc2.394 Carica papaya HOM05D006841 ORTHO05D008607 2.8e-59 233.8 151 74.8
MD11G1194000 Malus domestica HOM05D006841 ORTHO05D008607 1.5e-55 221.5 133 79.7
Oeu034210.1 Olea europaea HOM05D009051 ORTHO05D000140 8.6e-40 169.1 171 50.3
AagrBONN_evm.TU.Sc2ySwM_117.787 Anthoceros agrestis HOM05D006841 ORTHO05D008607 2.7e-33 147.5 212 40.1
Oeu034517.1 Olea europaea HOM05D006841 ORTHO05D008607 1.0e-32 145.6 228 38.2
Oeu034513.1 Olea europaea HOM05D006841 ORTHO05D008607 4.3e-31 140.2 226 37.6
Oeu034514.1 Olea europaea HOM05D006841 ORTHO05D008607 1.8e-29 134.8 126 54.8
Oeu034518.1 Olea europaea HOM05D006841 ORTHO05D008607 3.1e-29 134.0 149 49.0
VMungo0331G0799 Vigna mungo HOM05D000172 ORTHO05D004529 1.8e-21 108.2 108 47.2
Oeu019495.1 Olea europaea HOM05D006841 ORTHO05D008607 1.4e-13 82.0 87 43.7


User provided reference genes

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