Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.08g214950 Amaranthus hybridus HOM05D002678 ORTHO05D002920 1.1e-78 296.6 149 100.0
EL10Ac7g15949 Beta vulgaris HOM05D002678 ORTHO05D002920 3.4e-32 142.1 152 57.9
Ah.15g096380 Amaranthus hybridus HOM05D002678 ORTHO05D002920 1.9e-30 136.3 149 59.7
AUR62001849 Chenopodium quinoa HOM05D002678 ORTHO05D002920 1.2e-29 133.7 149 57.0
AUR62009642 Chenopodium quinoa HOM05D002678 ORTHO05D002920 8.7e-28 127.5 149 57.0
Manes.04G028900 Manihot esculenta HOM05D002678 ORTHO05D002920 2.5e-11 72.8 108 40.7
CSS0019295 Camellia sinensis var. sinensis HOM05D002678 ORTHO05D002920 7.4e-11 71.2 138 39.1
Cc06_g03230 Coffea canephora HOM05D002678 ORTHO05D002920 7.4e-11 71.2 111 36.9
Solyc10g084510.1 Solanum lycopersicum HOM05D002678 ORTHO05D002920 7.4e-11 71.2 110 40.0
Migut.L01639 Erythranthe guttata HOM05D002678 ORTHO05D002920 1.6e-10 70.1 134 37.3
Carub.0006s0146 Capsella rubella HOM05D002678 ORTHO05D002920 2.1e-10 69.7 114 37.7
RcHm_v2.0_Chr3g0467961 Rosa chinensis HOM05D002678 ORTHO05D002920 2.8e-10 69.3 106 42.5
Sopen10g033940 Solanum pennellii HOM05D002678 ORTHO05D002920 3.7e-10 68.9 110 39.1
TAR623G1692 Trochodendron aralioides HOM05D002678 ORTHO05D002920 3.7e-10 68.9 107 43.0
AUR62001571 Chenopodium quinoa HOM05D002678 ORTHO05D002920 6.2e-10 68.2 138 38.4
Hma1.2p1_0746F.1_g212310 Hydrangea macrophylla HOM05D002678 ORTHO05D002920 8.1e-10 67.8 111 40.5
PGSC0003DMG400011054 Solanum tuberosum HOM05D002678 ORTHO05D002920 8.1e-10 67.8 110 39.1
Aqoxy2G01947 Aquilegia oxysepala HOM05D002678 ORTHO05D002920 1.8e-09 66.6 108 39.8
TAR636G3383 Trochodendron aralioides HOM05D002678 ORTHO05D002920 3.1e-09 65.9 106 41.5
ATR0759G110 Amborella trichopoda HOM05D002678 ORTHO05D002920 5.3e-09 65.1 106 40.6
FAN09G4043 Fragaria x ananassa HOM05D002678 ORTHO05D002920 5.3e-09 65.1 106 39.6
Glyma.03G175100 Glycine max HOM05D002678 ORTHO05D002920 5.3e-09 65.1 104 40.4
Hma1.2p1_0035F.1_g021820 Hydrangea macrophylla HOM05D002678 ORTHO05D002920 5.3e-09 65.1 104 41.3
ECA248G3075 Erigeron canadensis HOM05D002678 ORTHO05D002920 6.9e-09 64.7 125 35.2
FvH4_6g14750 Fragaria vesca HOM05D002678 ORTHO05D002920 6.9e-09 64.7 106 39.6
FAN05G1053 Fragaria x ananassa HOM05D002678 ORTHO05D002920 6.9e-09 64.7 106 39.6
FAN14G4174 Fragaria x ananassa HOM05D002678 ORTHO05D002920 6.9e-09 64.7 106 39.6
Nn2g12832 Nelumbo nucifera HOM05D002678 ORTHO05D002920 6.9e-09 64.7 110 40.9
Duzib150G0336 Durio zibethinus HOM05D002678 ORTHO05D002920 9.0e-09 64.3 107 38.3
Oeu035168.1 Olea europaea HOM05D002678 ORTHO05D002920 9.0e-09 64.3 118 40.7
CiPaw.13G102100 Carya illinoinensis HOM05D002678 ORTHO05D002920 1.2e-08 63.9 161 34.2
Sabra16G0089400 Salix brachista HOM05D002678 ORTHO05D002920 1.2e-08 63.9 137 35.8
EL10Ac7g16278 Beta vulgaris HOM05D002678 ORTHO05D002920 1.5e-08 63.5 142 36.6
Nn2g10547 Nelumbo nucifera HOM05D002678 ORTHO05D002920 1.5e-08 63.5 107 40.2
Rhsim13G0088900 Rhododendron simsii HOM05D002678 ORTHO05D002920 1.5e-08 63.5 141 35.5
Potri.016G081600 Populus trichocarpa HOM05D002678 ORTHO05D002920 2.6e-08 62.8 104 37.5
Dinv35670 Davidia involucrata HOM05D002678 ORTHO05D002920 3.4e-08 62.4 121 38.0
FAN02G3512 Fragaria x ananassa HOM05D002678 ORTHO05D002920 3.4e-08 62.4 106 39.6
Gohir.D08G009900 Gossypium hirsutum HOM05D002678 ORTHO05D002920 3.4e-08 62.4 139 38.1
Gorai.004G003100 Gossypium raimondii HOM05D002678 ORTHO05D002920 3.4e-08 62.4 139 38.1
Manes.08G073300 Manihot esculenta HOM05D002678 ORTHO05D002920 3.4e-08 62.4 104 38.5
Potri.006G215000 Populus trichocarpa HOM05D002678 ORTHO05D002920 4.5e-08 62.0 105 38.1
Gohir.A08G000129 Gossypium hirsutum HOM05D002678 ORTHO05D002920 5.8e-08 61.6 139 38.1
Gohir.D03G131000 Gossypium hirsutum HOM05D002678 ORTHO05D002920 5.8e-08 61.6 132 34.8
CsaV3_6G022030 Cucumis sativus L. HOM05D002678 ORTHO05D002920 7.6e-08 61.2 106 37.7
Eucgr.L00360 Eucalyptus grandis HOM05D002678 ORTHO05D002920 7.6e-08 61.2 106 36.8
Glyma.19G175800 Glycine max HOM05D002678 ORTHO05D002920 7.6e-08 61.2 104 39.4
MD04G1116500 Malus domestica HOM05D002678 ORTHO05D002920 7.6e-08 61.2 106 36.8
SEGI_24546 Sequoiadendron giganteum HOM05D002678 ORTHO05D002920 9.9e-08 60.8 114 35.1
A03p00870 Brassica napus HOM05D002678 ORTHO05D002920 1.3e-07 60.5 114 35.1
C03p01120 Brassica napus HOM05D002678 ORTHO05D002920 1.3e-07 60.5 114 35.1
BolC3t12671H Brassica oleracea HOM05D002678 ORTHO05D002920 1.3e-07 60.5 114 35.1
Manes.11G136900 Manihot esculenta HOM05D002678 ORTHO05D002920 1.3e-07 60.5 137 32.8
Oeu058517.1 Olea europaea HOM05D002678 ORTHO05D002920 1.3e-07 60.5 122 37.7
Sp6g39880 Schrenkiella parvula HOM05D002678 ORTHO05D002920 1.3e-07 60.5 115 33.0
Actinidia37266 Actinidia chinensis HOM05D002678 ORTHO05D002920 2.2e-07 59.7 100 38.0
DCAR_014949 Daucus carota HOM05D002678 ORTHO05D002920 2.2e-07 59.7 104 38.5
BolC9t60133H Brassica oleracea HOM05D002678 ORTHO05D002920 2.9e-07 59.3 117 34.2
AUR62020213 Chenopodium quinoa HOM05D002678 ORTHO05D002920 2.9e-07 59.3 106 39.6
BcaC06g32005 Brassica carinata HOM05D002678 ORTHO05D002920 3.8e-07 58.9 116 35.3
Gorai.003G137800 Gossypium raimondii HOM05D002678 ORTHO05D002920 3.8e-07 58.9 132 34.1
Medtr7g100340 Medicago truncatula HOM05D002678 ORTHO05D002920 3.8e-07 58.9 104 38.5
TPR.G35579 Trifolium pratense HOM05D002678 ORTHO05D002920 3.8e-07 58.9 118 37.3
VMungo1383G3255 Vigna mungo HOM05D002678 ORTHO05D002920 4.9e-07 58.5 106 36.8
BcaNung03282 Brassica carinata HOM05D002678 ORTHO05D002920 6.4e-07 58.2 117 35.0
C09p73980 Brassica napus HOM05D002678 ORTHO05D002920 6.4e-07 58.2 117 35.0
MBI05_g32634_MAGBIO Magnolia biondii HOM05D002678 ORTHO05D002920 6.4e-07 58.2 104 34.6
Oeu040266.1 Olea europaea HOM05D002678 ORTHO05D002920 6.4e-07 58.2 125 34.4
Sed0001325 Sechium edule HOM05D002678 ORTHO05D002920 6.4e-07 58.2 109 39.4
Thecc.09G330900 Theobroma cacao HOM05D002678 ORTHO05D002920 6.4e-07 58.2 118 34.7
COL.COLO4_18420 Corchorus olitorius HOM05D002678 ORTHO05D002920 8.4e-07 57.8 120 34.2
Haze_20701 Corylus avellana HOM05D002678 ORTHO05D002920 8.4e-07 57.8 104 39.4
MBI14_g21098_MAGBIO Magnolia biondii HOM05D002678 ORTHO05D002920 8.4e-07 57.8 107 39.3
MD12G1132300 Malus domestica HOM05D002678 ORTHO05D002920 8.4e-07 57.8 106 34.9
THA.LOC104826999 Tarenaya hassleriana HOM05D002678 ORTHO05D002920 8.4e-07 57.8 121 32.2
Glyma.10G046800 Glycine max HOM05D002678 ORTHO05D002920 1.1e-06 57.4 120 38.3
Lalb_Chr02g0153371 Lupinus albus HOM05D002678 ORTHO05D002920 1.1e-06 57.4 136 31.6
DCAR_015584 Daucus carota HOM05D002678 ORTHO05D002920 1.4e-06 57.0 129 37.2
Nitab4.5_0007030g0030 Nicotiana tabacum HOM05D002678 ORTHO05D002920 1.4e-06 57.0 108 38.9
Prupe.6G246400 Prunus persica HOM05D002678 ORTHO05D002920 1.4e-06 57.0 104 40.4
VMungo0720G1849 Vigna mungo HOM05D002678 ORTHO05D002920 1.4e-06 57.0 105 36.2
Atru.chr3.3786 Acer truncatum HOM05D002678 ORTHO05D002920 1.9e-06 56.6 108 37.0
AT5G02640 Arabidopsis thaliana HOM05D002678 ORTHO05D002920 1.9e-06 56.6 113 34.5
MELO3C025706.2 Cucumis melo HOM05D002678 ORTHO05D002920 1.9e-06 56.6 111 36.9
Sopen11g030550 Solanum pennellii HOM05D002678 ORTHO05D002920 1.9e-06 56.6 106 38.7
TWI75G0718 Tripterygium wilfordii HOM05D002678 ORTHO05D002920 1.9e-06 56.6 115 32.2
vmacro03134 Vaccinium macrocarpon HOM05D002678 ORTHO05D002920 1.9e-06 56.6 104 36.5
Lalb_Chr25g0289391 Lupinus albus HOM05D002678 ORTHO05D002920 2.4e-06 56.2 104 35.6
Solyc11g072890.1 Solanum lycopersicum HOM05D002678 ORTHO05D002920 2.4e-06 56.2 140 33.6
Gohir.A03G037400 Gossypium hirsutum HOM05D002678 ORTHO05D002920 3.2e-06 55.8 132 32.6
A10p33010 Brassica napus HOM05D002678 ORTHO05D002920 4.2e-06 55.5 115 31.3
Cfa017459 Carpinus fangiana HOM05D002678 ORTHO05D002920 4.2e-06 55.5 104 36.5
ClCG10G020770 Citrullus lanatus HOM05D002678 ORTHO05D002920 4.2e-06 55.5 110 34.5
Duzib168G1913 Durio zibethinus HOM05D002678 ORTHO05D002920 4.2e-06 55.5 132 34.1
Migut.N02647 Erythranthe guttata HOM05D002678 ORTHO05D002920 4.2e-06 55.5 102 39.2
Thhalv10014890m.g Eutrema salsugineum HOM05D002678 ORTHO05D002920 4.2e-06 55.5 116 34.5
Gohir.D07G099200 Gossypium hirsutum HOM05D002678 ORTHO05D002920 4.2e-06 55.5 138 31.9
ClCG02G020590 Citrullus lanatus HOM05D002678 ORTHO05D002920 5.5e-06 55.1 118 33.9
Phvul.007G160800 Phaseolus vulgaris HOM05D002678 ORTHO05D002920 5.5e-06 55.1 105 37.1
QL01p034494 Quercus lobata HOM05D002678 ORTHO05D002920 5.5e-06 55.1 105 36.2
AL6G11940 Arabidopsis lyrata HOM05D002678 ORTHO05D002920 7.1e-06 54.7 112 32.1
Glyma.13G134700 Glycine max HOM05D002678 ORTHO05D002920 7.1e-06 54.7 125 36.8
Ca_11435_v3 Cicer arietinum L. HOM05D002678 ORTHO05D002920 9.3e-06 54.3 104 37.5
Gorai.001G106900 Gossypium raimondii HOM05D002678 ORTHO05D002920 9.3e-06 54.3 138 31.2
Rhsim05G0185100 Rhododendron simsii HOM05D002678 ORTHO05D002920 9.3e-06 54.3 120 33.3


User provided reference genes

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