Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.08g211020 Amaranthus hybridus HOM05D006043 ORTHO05D007309 3.5e-77 291.6 150 100.0
EL10Ac7g17005 Beta vulgaris HOM05D006043 ORTHO05D007309 9.2e-54 213.8 151 74.8
Sc07g0005350 Simmondsia chinensis HOM05D006043 ORTHO05D007309 6.2e-50 201.1 149 67.8
Lj1g0027910 Lotus japonicus HOM05D006043 ORTHO05D007309 3.0e-36 155.6 145 55.2
Potri.013G014300 Populus trichocarpa HOM05D006043 ORTHO05D007309 1.1e-35 153.7 150 54.7
Manes.08G019800 Manihot esculenta HOM05D006043 ORTHO05D007309 1.5e-35 153.3 149 55.0
QL07p040748 Quercus lobata HOM05D006043 ORTHO05D007309 7.4e-35 151.0 149 57.0
AUR62033593 Chenopodium quinoa HOM05D006043 ORTHO05D007309 2.1e-34 149.4 134 61.2
Lalb_Chr20g0112261 Lupinus albus HOM05D006043 ORTHO05D007309 2.1e-34 149.4 146 54.8
Ca_08959_v3 Cicer arietinum L. HOM05D006043 ORTHO05D007309 2.8e-34 149.1 143 53.1
Haze_19524 Corylus avellana HOM05D006043 ORTHO05D007309 2.8e-34 149.1 149 56.4
VMungo1383G3657 Vigna mungo HOM05D006043 ORTHO05D007309 2.8e-34 149.1 145 55.2
Cpa.g.sc5.89 Carica papaya HOM05D006043 ORTHO05D007309 4.8e-34 148.3 145 56.6
FAN02G0054 Fragaria x ananassa HOM05D006043 ORTHO05D007309 8.1e-34 147.5 150 56.7
Glyma.19G190400 Glycine max HOM05D006043 ORTHO05D007309 3.1e-33 145.6 145 51.7
Atru.chr8.1654 Acer truncatum HOM05D006043 ORTHO05D007309 5.3e-33 144.8 148 54.7
FvH4_6g17700 Fragaria vesca HOM05D006043 ORTHO05D007309 1.2e-32 143.7 150 55.3
Cfa016525 Carpinus fangiana HOM05D006043 ORTHO05D007309 1.5e-32 143.3 151 55.0
RcHm_v2.0_Chr3g0471911 Rosa chinensis HOM05D006043 ORTHO05D007309 1.5e-32 143.3 148 54.7
Prupe.7G119300 Prunus persica HOM05D006043 ORTHO05D007309 2.6e-32 142.5 149 54.4
Phvul.001G185700 Phaseolus vulgaris HOM05D006043 ORTHO05D007309 4.5e-32 141.7 144 54.2
CsaV3_3G036730 Cucumis sativus L. HOM05D006043 ORTHO05D007309 5.8e-32 141.4 145 53.1
vmacro12136 Vaccinium macrocarpon HOM05D006043 ORTHO05D007309 5.8e-32 141.4 149 55.7
Glyma.03G190100 Glycine max HOM05D006043 ORTHO05D007309 1.3e-31 140.2 146 50.0
CiPaw.10G004600 Carya illinoinensis HOM05D006043 ORTHO05D007309 1.7e-31 139.8 149 51.7
COL.COLO4_29832 Corchorus olitorius HOM05D006043 ORTHO05D007309 2.2e-31 139.4 149 51.0
Rhsim06G0171100 Rhododendron simsii HOM05D006043 ORTHO05D007309 2.2e-31 139.4 150 51.3
Peaxi162Scf00412g00073 Petunia axillaris HOM05D006043 ORTHO05D007309 3.8e-31 138.7 151 57.6
ClCG10G019450 Citrullus lanatus HOM05D006043 ORTHO05D007309 8.4e-31 137.5 145 52.4
Sp3g08330 Schrenkiella parvula HOM05D006043 ORTHO05D007309 1.9e-30 136.3 150 52.0
CANSAT80G1206 Cannabis sativa HOM05D006043 ORTHO05D007309 2.4e-30 136.0 145 51.7
MELO3C009427.2 Cucumis melo HOM05D006043 ORTHO05D007309 2.4e-30 136.0 145 52.4
Medtr7g103520 Medicago truncatula HOM05D006043 ORTHO05D007309 4.2e-30 135.2 144 50.0
Duzib106G1072 Durio zibethinus HOM05D006043 ORTHO05D007309 5.5e-30 134.8 147 51.7
TPR.G7024 Trifolium pratense HOM05D006043 ORTHO05D007309 1.2e-29 133.7 145 51.0
HanXRQChr09g0259401 Helianthus annuus HOM05D006043 ORTHO05D007309 1.6e-29 133.3 148 54.1
CARHR084520 Cardamine hirsuta HOM05D006043 ORTHO05D007309 3.5e-29 132.1 147 48.3
Eucgr.K02384 Eucalyptus grandis HOM05D006043 ORTHO05D007309 1.0e-28 130.6 154 50.0
Gorai.006G158600 Gossypium raimondii HOM05D006043 ORTHO05D007309 1.0e-28 130.6 150 48.0
Eucgr.K02399 Eucalyptus grandis HOM05D006043 ORTHO05D007309 1.3e-28 130.2 151 50.3
Eucgr.K02410 Eucalyptus grandis HOM05D006043 ORTHO05D007309 1.3e-28 130.2 154 50.0
MD14G1014200 Malus domestica HOM05D006043 ORTHO05D007309 1.8e-28 129.8 144 50.0
Gohir.D09G138000 Gossypium hirsutum HOM05D006043 ORTHO05D007309 2.3e-28 129.4 150 48.0
CSS0040940 Camellia sinensis var. sinensis HOM05D006043 ORTHO05D007309 3.0e-28 129.0 155 51.0
BcaB03g11578 Brassica carinata HOM05D006043 ORTHO05D007309 3.9e-28 128.6 148 49.3
Ciclev10013017m.g Citrus clementina HOM05D006043 ORTHO05D007309 3.9e-28 128.6 149 50.3
BraA03t12747Z Brassica rapa HOM05D006043 ORTHO05D007309 1.9e-27 126.3 149 49.0
Oeu040545.1 Olea europaea HOM05D006043 ORTHO05D007309 1.9e-27 126.3 152 52.6
Eucgr.K02389 Eucalyptus grandis HOM05D006043 ORTHO05D007309 2.5e-27 125.9 150 49.3
AL3G21330 Arabidopsis lyrata HOM05D006043 ORTHO05D007309 3.3e-27 125.6 145 46.9
C03p43400 Brassica napus HOM05D006043 ORTHO05D007309 3.3e-27 125.6 149 48.3
Gohir.A09G136312 Gossypium hirsutum HOM05D006043 ORTHO05D007309 3.3e-27 125.6 160 45.6
MD12G1016000 Malus domestica HOM05D006043 ORTHO05D007309 3.3e-27 125.6 144 47.9
AT3G10020 Arabidopsis thaliana HOM05D006043 ORTHO05D007309 4.3e-27 125.2 147 46.9
BcaC01g04256 Brassica carinata HOM05D006043 ORTHO05D007309 4.3e-27 125.2 149 48.3
Dinv21268 Davidia involucrata HOM05D006043 ORTHO05D007309 4.3e-27 125.2 147 52.4
A03p35730 Brassica napus HOM05D006043 ORTHO05D007309 7.4e-27 124.4 145 49.7
Gohir.A04G066428 Gossypium hirsutum HOM05D006043 ORTHO05D007309 2.8e-26 122.5 147 48.3
SGA_v2.0_scaffold40G15419 Striga asiatica HOM05D006043 ORTHO05D007309 2.8e-26 122.5 151 49.7
TWI53G1797 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 2.8e-26 122.5 105 55.2
Aa31LG3G2550 Aethionema arabicum HOM05D006043 ORTHO05D007309 3.7e-26 122.1 144 45.8
Gohir.D04G105000 Gossypium hirsutum HOM05D006043 ORTHO05D007309 4.8e-26 121.7 141 49.6
Gorai.009G408700 Gossypium raimondii HOM05D006043 ORTHO05D007309 4.8e-26 121.7 141 49.6
Nitab4.5_0010125g0030 Nicotiana tabacum HOM05D006043 ORTHO05D007309 6.2e-26 121.3 149 51.0
Thhalv10021699m.g Eutrema salsugineum HOM05D006043 ORTHO05D007309 8.2e-26 120.9 147 47.6
BraA05t22694Z Brassica rapa HOM05D006043 ORTHO05D007309 1.1e-25 120.6 148 48.0
Carub.0003s0912 Capsella rubella HOM05D006043 ORTHO05D007309 1.1e-25 120.6 146 45.9
Eucgr.A01560 Eucalyptus grandis HOM05D006043 ORTHO05D007309 1.1e-25 120.6 144 47.2
A05p39030 Brassica napus HOM05D006043 ORTHO05D007309 1.8e-25 119.8 149 47.7
AUR62037886 Chenopodium quinoa HOM05D006043 ORTHO05D007309 1.8e-25 119.8 137 51.1
Sed0027852 Sechium edule HOM05D006043 ORTHO05D007309 1.8e-25 119.8 145 46.2
BolC3t16611H Brassica oleracea HOM05D006043 ORTHO05D007309 2.4e-25 119.4 150 46.7
Cc00_g32800 Coffea canephora HOM05D006043 ORTHO05D007309 2.4e-25 119.4 147 51.7
Nn6g35076 Nelumbo nucifera HOM05D006043 ORTHO05D007309 2.4e-25 119.4 133 50.4
Aqoxy2G01470 Aquilegia oxysepala HOM05D006043 ORTHO05D007309 3.1e-25 119.0 127 53.5
BcaC05g29726 Brassica carinata HOM05D006043 ORTHO05D007309 3.1e-25 119.0 152 46.7
C05p58050 Brassica napus HOM05D002004 ORTHO05D002089 3.1e-25 119.0 148 47.3
BolC5t34462H Brassica oleracea HOM05D006043 ORTHO05D007309 3.1e-25 119.0 148 47.3
Oeu030483.1 Olea europaea HOM05D006043 ORTHO05D007309 4.0e-25 118.6 150 48.0
MBI01_g32535_MAGBIO Magnolia biondii HOM05D006043 ORTHO05D007309 5.3e-25 118.2 137 50.4
Duzib093G0521 Durio zibethinus HOM05D006043 ORTHO05D007309 1.2e-24 117.1 154 47.4
PSO384G2483 Papaver somniferum HOM05D006043 ORTHO05D007309 2.0e-24 116.3 158 43.7
Zm00001eb406490 Zea mays HOM05D006043 ORTHO05D007309 2.0e-24 116.3 140 51.4
Peaxi162Scf00412g00063 Petunia axillaris HOM05D006043 ORTHO05D007309 2.6e-24 115.9 149 47.7
SalBow3G1044 Salvia bowleyana HOM05D006043 ORTHO05D007309 3.4e-24 115.5 146 46.6
PGSC0003DMG400002724 Solanum tuberosum HOM05D006043 ORTHO05D007309 3.4e-24 115.5 144 47.9
Sopen09g003740 Solanum pennellii HOM05D006043 ORTHO05D007309 2.2e-23 112.8 145 51.0
Cc06_g05110 Coffea canephora HOM05D006043 ORTHO05D007309 3.8e-23 112.1 148 46.6
Solyc09g008980.2 Solanum lycopersicum HOM05D006043 ORTHO05D007309 3.8e-23 112.1 145 50.3
DCAR_009167 Daucus carota HOM05D006043 ORTHO05D007309 4.9e-23 111.7 145 46.9
Psat3g036320 Pisum sativum HOM05D006043 ORTHO05D007309 4.9e-23 111.7 106 50.9
Os12g0147200 Oryza sativa ssp. japonica HOM05D006043 ORTHO05D007309 6.5e-23 111.3 139 49.6
CAN.G824.34 Capsicum annuum HOM05D006043 ORTHO05D007309 8.4e-23 110.9 139 48.9
Nitab4.5_0010125g0040 Nicotiana tabacum HOM05D006043 ORTHO05D007309 8.4e-23 110.9 124 54.8
Cc00_g05260 Coffea canephora HOM05D006043 ORTHO05D007309 1.4e-22 110.2 146 49.3
PGSC0003DMG400002723 Solanum tuberosum HOM05D006043 ORTHO05D007309 1.4e-22 110.2 139 51.8
Aqoxy1G00961 Aquilegia oxysepala HOM05D006043 ORTHO05D007309 1.9e-22 109.8 150 46.7
Os11g0149200 Oryza sativa ssp. japonica HOM05D006043 ORTHO05D007309 4.2e-22 108.6 138 48.6
Lsat_1_v5_gn_2_22321 Lactuca sativa HOM05D006043 ORTHO05D007309 7.1e-22 107.8 139 49.6
THA.LOC104816380 Tarenaya hassleriana HOM05D006043 ORTHO05D007309 4.6e-21 105.1 110 49.1
TWI13G0012 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 4.6e-21 105.1 110 51.8
TWI74G0769 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 4.6e-21 105.1 110 51.8
BolC8t51238H Brassica oleracea HOM05D006043 ORTHO05D007309 7.9e-21 104.4 139 45.3
PGR004G1627 Punica granatum HOM05D006043 ORTHO05D007309 1.0e-20 104.0 133 48.1
Nitab4.5_0001922g0090 Nicotiana tabacum HOM05D006043 ORTHO05D007309 1.9e-19 99.8 123 48.8
Thecc.05G079900 Theobroma cacao HOM05D006043 ORTHO05D007309 1.3e-18 97.1 148 41.9
Nn2g13971 Nelumbo nucifera HOM05D006043 ORTHO05D007309 2.2e-18 96.3 117 49.6
ECA126G0006 Erigeron canadensis HOM05D006043 ORTHO05D007309 2.8e-18 95.9 150 42.7
Solyc09g008970.1 Solanum lycopersicum HOM05D006043 ORTHO05D007309 1.4e-17 93.6 150 42.7
Sopen09g003730 Solanum pennellii HOM05D006043 ORTHO05D007309 5.3e-17 91.7 150 44.0
Lj2P127T74 Lonicera japonica HOM05D006043 ORTHO05D007309 1.5e-16 90.1 125 46.4
HPP92_021571 Vanilla planifolia HOM05D006043 ORTHO05D007309 2.9e-15 85.9 131 38.9
TAR334G0001 Trochodendron aralioides HOM05D006043 ORTHO05D007309 2.5e-14 82.8 87 58.6
TAR369G1076 Trochodendron aralioides HOM05D006043 ORTHO05D007309 2.5e-14 82.8 87 58.6
Lj4P368T6 Lonicera japonica HOM05D006043 ORTHO05D007309 3.2e-14 82.4 87 52.9
Prupe.7G091800 Prunus persica HOM05D006043 ORTHO05D007309 4.2e-14 82.0 90 52.2
SEGI_20897 Sequoiadendron giganteum HOM05D006043 ORTHO05D007309 1.5e-11 73.6 99 48.5
C08p36560 Brassica napus HOM05D006043 ORTHO05D007309 3.3e-11 72.4 105 43.8
Mapoly0058s0037 Marchantia polymorpha HOM05D006043 ORTHO05D007309 5.7e-11 71.6 112 41.1
BcaC03g16179 Brassica carinata HOM05D006043 ORTHO05D007309 9.7e-11 70.9 105 43.8
C02p39530 Brassica napus HOM05D006043 ORTHO05D007309 9.7e-11 70.9 105 43.8
BolC2t09966H Brassica oleracea HOM05D006043 ORTHO05D007309 9.7e-11 70.9 105 43.8
THA.LOC104823222 Tarenaya hassleriana HOM05D006043 ORTHO05D007309 1.3e-10 70.5 86 44.2


User provided reference genes

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