Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.08g210060 Amaranthus hybridus HOM05D007097 ORTHO05D008131 1.2e-126 456.4 222 100.0
Ah.08g210070 Amaranthus hybridus HOM05D007097 ORTHO05D008131 8.3e-59 231.1 213 61.0
AUR62026332 Chenopodium quinoa HOM05D007097 ORTHO05D008131 8.9e-21 104.8 199 37.7
AUR62006282 Chenopodium quinoa HOM05D007097 ORTHO05D008131 2.3e-16 90.1 233 31.8
Sc02g0000610 Simmondsia chinensis HOM05D007097 ORTHO05D008131 1.1e-13 81.3 97 47.4
Cpa.g.sc104.37 Carica papaya HOM05D007097 ORTHO05D008131 2.6e-12 76.6 222 32.0
EL10Ac7g16802 Beta vulgaris HOM05D007097 ORTHO05D008131 5.8e-12 75.5 224 32.6
MD12G1039700 Malus domestica HOM05D007097 ORTHO05D008131 6.4e-11 72.0 144 33.3
Nn6g34702 Nelumbo nucifera HOM05D007097 ORTHO05D008131 8.4e-11 71.6 102 39.2
TWI74G0793 Tripterygium wilfordii HOM05D007097 ORTHO05D008131 2.4e-10 70.1 191 29.8
PGSC0003DMG400028148 Solanum tuberosum HOM05D007097 ORTHO05D008131 7.1e-10 68.6 228 29.4
Nn2g14294 Nelumbo nucifera HOM05D007097 ORTHO05D008131 9.3e-10 68.2 102 38.2
Nn1g01483 Nelumbo nucifera HOM05D007097 ORTHO05D008131 1.6e-09 67.4 101 37.6
ClCG10G018390 Citrullus lanatus HOM05D007097 ORTHO05D008131 2.1e-09 67.0 98 39.8
COL.COLO4_29582 Corchorus olitorius HOM05D007097 ORTHO05D008131 2.1e-09 67.0 93 43.0
Dinv31755 Davidia involucrata HOM05D007097 ORTHO05D008131 2.1e-09 67.0 91 40.7
FAN02G1136 Fragaria x ananassa HOM05D007097 ORTHO05D008131 2.7e-09 66.6 98 41.8
QL07p036825 Quercus lobata HOM05D007097 ORTHO05D008131 2.7e-09 66.6 81 45.7
CiPaw.09G020600 Carya illinoinensis HOM05D007097 ORTHO05D008131 3.5e-09 66.2 93 37.6
FAN09G3875 Fragaria x ananassa HOM05D007097 ORTHO05D008131 3.5e-09 66.2 98 37.8
Gohir.A09G134600 Gossypium hirsutum HOM05D007097 ORTHO05D008131 3.5e-09 66.2 93 38.7
MD14G1038300 Malus domestica HOM05D007097 ORTHO05D008131 4.6e-09 65.9 144 31.9
Prupe.7G095200 Prunus persica HOM05D007097 ORTHO05D008131 4.6e-09 65.9 135 34.1
TAR633G2246 Trochodendron aralioides HOM05D007097 ORTHO05D008131 6.0e-09 65.5 102 37.3
FvH4_6g20260 Fragaria vesca HOM05D007097 ORTHO05D008131 7.9e-09 65.1 98 37.8
FAN05G0285 Fragaria x ananassa HOM05D007097 ORTHO05D008131 7.9e-09 65.1 98 37.8
Manes.09G044900 Manihot esculenta HOM05D007097 ORTHO05D008131 7.9e-09 65.1 103 36.9
Peaxi162Scf00211g00105 Petunia axillaris HOM05D007097 ORTHO05D008131 7.9e-09 65.1 150 32.7
SGA_v2.0_scaffold13G06627 Striga asiatica HOM05D007097 ORTHO05D008131 1.0e-08 64.7 100 37.0
FAN14G0555 Fragaria x ananassa HOM05D007097 ORTHO05D008131 1.3e-08 64.3 89 38.2
Sopen10g032440 Solanum pennellii HOM05D007097 ORTHO05D008131 1.3e-08 64.3 232 31.0
Actinidia37742 Actinidia chinensis HOM05D007097 ORTHO05D008131 1.8e-08 63.9 148 33.8
FAN05G2168 Fragaria x ananassa HOM05D007097 ORTHO05D008131 1.8e-08 63.9 89 38.2
Solyc10g081930.1 Solanum lycopersicum HOM05D007097 ORTHO05D008131 1.8e-08 63.9 232 31.0
Ca_11701_v3 Cicer arietinum L. HOM05D007097 ORTHO05D008131 3.9e-08 62.8 124 33.9
Lalb_Chr01g0017871 Lupinus albus HOM05D007097 ORTHO05D008131 3.9e-08 62.8 95 38.9
Solyc01g007190.3 Solanum lycopersicum HOM05D007097 ORTHO05D008131 3.9e-08 62.8 111 36.9
CAN.G1245.7 Capsicum annuum HOM05D007097 ORTHO05D008131 5.1e-08 62.4 102 40.2
CsaV3_3G037910 Cucumis sativus L. HOM05D007097 ORTHO05D008131 5.1e-08 62.4 93 38.7
SalBow5G4860 Salvia bowleyana HOM05D007097 ORTHO05D008131 5.1e-08 62.4 91 37.4
Gorai.006G149800 Gossypium raimondii HOM05D007097 ORTHO05D008131 6.7e-08 62.0 93 37.6
Actinidia37743 Actinidia chinensis HOM05D007097 ORTHO05D008131 8.7e-08 61.6 93 39.8
RcHm_v2.0_Chr3g0475851 Rosa chinensis HOM05D007097 ORTHO05D008131 8.7e-08 61.6 97 38.1
Sed0025399 Sechium edule HOM05D007097 ORTHO05D008131 8.7e-08 61.6 93 36.6
unitig_22.g5144 Utricularia gibba HOM05D007097 ORTHO05D008131 8.7e-08 61.6 97 42.3
MELO3C009534.2 Cucumis melo HOM05D007097 ORTHO05D008131 1.1e-07 61.2 93 37.6
SGA_v2.0_scaffold31G12846 Striga asiatica HOM05D007097 ORTHO05D008131 1.1e-07 61.2 98 35.7
Haze_20191 Corylus avellana HOM05D007097 ORTHO05D008131 1.5e-07 60.8 91 36.3
Thecc.05G103600 Theobroma cacao HOM05D007097 ORTHO05D008131 1.5e-07 60.8 88 38.6
unitig_578.g16474 Utricularia gibba HOM05D007097 ORTHO05D008131 1.5e-07 60.8 76 40.8
Sopen01g003170 Solanum pennellii HOM05D007097 ORTHO05D008131 1.9e-07 60.5 111 35.1
Ciclev10012818m.g Citrus clementina HOM05D007097 ORTHO05D008131 2.5e-07 60.1 91 37.4
Lalb_Chr20g0111401 Lupinus albus HOM05D007097 ORTHO05D008131 2.5e-07 60.1 83 38.6
Sabra06G0157000 Salix brachista HOM05D007097 ORTHO05D008131 2.5e-07 60.1 103 35.9
Sed0014531 Sechium edule HOM05D007097 ORTHO05D008131 2.5e-07 60.1 89 40.4
Cc06_g06500 Coffea canephora HOM05D007097 ORTHO05D008131 3.3e-07 59.7 98 33.7
Migut.J00707 Erythranthe guttata HOM05D007097 ORTHO05D008131 3.3e-07 59.7 101 36.6
Gohir.D09G131100 Gossypium hirsutum HOM05D007097 ORTHO05D008131 4.3e-07 59.3 93 36.6
Nitab4.5_0000020g0090 Nicotiana tabacum HOM05D007097 ORTHO05D008131 4.3e-07 59.3 99 37.4
Peaxi162Scf00388g01015 Petunia axillaris HOM05D007097 ORTHO05D008131 4.3e-07 59.3 94 36.2
Nitab4.5_0005325g0010 Nicotiana tabacum HOM05D007097 ORTHO05D008131 5.6e-07 58.9 98 35.7
PGSC0003DMG400016423 Solanum tuberosum HOM05D007097 ORTHO05D008131 5.6e-07 58.9 111 34.2
Glyma.10G081100 Glycine max HOM05D007097 ORTHO05D008131 7.4e-07 58.5 222 25.7
Nn2g13712 Nelumbo nucifera HOM05D007097 ORTHO05D008131 9.6e-07 58.2 102 36.3
Atru.chr8.1373 Acer truncatum HOM05D007097 ORTHO05D008131 1.6e-06 57.4 92 32.6
Medtr1g057600 Medicago truncatula HOM05D007097 ORTHO05D008131 2.1e-06 57.0 120 29.2
TPR.G2776 Trifolium pratense HOM05D007097 ORTHO05D008131 2.1e-06 57.0 87 33.3
Lsat_1_v5_gn_2_55400 Lactuca sativa HOM05D007097 ORTHO05D008131 3.6e-06 56.2 102 36.3
Nitab4.5_0001287g0020 Nicotiana tabacum HOM05D007097 ORTHO05D008131 4.8e-06 55.8 197 28.4
Phvul.007G268300 Phaseolus vulgaris HOM05D007097 ORTHO05D008131 4.8e-06 55.8 83 36.1
VMungo0720G1866 Vigna mungo HOM05D007097 ORTHO05D008131 4.8e-06 55.8 90 32.2


User provided reference genes

Program Settings