Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.08g209360 Amaranthus hybridus HOM05D009425 ORTHO05D000427 8.6e-120 433.7 228 100.0
Ah.08g209340 Amaranthus hybridus HOM05D009425 ORTHO05D000427 5.0e-75 285.0 187 71.1
AUR62024285 Chenopodium quinoa HOM05D009425 ORTHO05D000427 9.4e-42 174.5 181 48.6
AUR62028782 Chenopodium quinoa HOM05D009425 ORTHO05D000427 4.5e-36 155.6 180 47.8
AUR62028785 Chenopodium quinoa HOM05D009425 ORTHO05D000427 4.5e-36 155.6 180 47.8
AUR62044111 Chenopodium quinoa HOM05D009425 ORTHO05D000427 4.5e-36 155.6 180 47.8
AUR62044114 Chenopodium quinoa HOM05D009425 ORTHO05D000427 4.5e-36 155.6 180 47.8
AUR62044108 Chenopodium quinoa HOM05D009425 ORTHO05D000427 2.9e-35 152.9 179 47.5
AUR62044167 Chenopodium quinoa HOM05D009425 ORTHO05D000427 3.0e-32 142.9 139 51.8
AUR62044482 Chenopodium quinoa HOM05D009425 ORTHO05D000427 2.5e-26 123.2 110 53.6
AUR62044170 Chenopodium quinoa HOM05D009425 ORTHO05D000427 3.3e-26 122.9 145 46.9
AUR62043779 Chenopodium quinoa HOM05D009425 ORTHO05D012047 9.2e-21 104.8 116 47.4
EL10Ac4g09444 Beta vulgaris HOM05D009425 ORTHO05D000427 6.8e-16 88.6 187 32.6
AUR62005782 Chenopodium quinoa HOM05D000535 ORTHO05D000427 8.3e-14 81.6 179 30.7
EL10Ac3g06699 Beta vulgaris HOM05D009425 ORTHO05D000427 1.9e-13 80.5 179 33.0
Ah.02g122230 Amaranthus hybridus HOM05D009425 ORTHO05D000427 9.2e-13 78.2 173 32.4
EL10Ac3g06696 Beta vulgaris HOM05D009425 ORTHO05D000427 9.2e-13 78.2 173 28.3
Ah.04g150130 Amaranthus hybridus HOM05D000535 ORTHO05D000427 1.2e-12 77.8 154 31.2
EL10Ac3g06647 Beta vulgaris HOM05D009425 ORTHO05D000427 1.2e-12 77.8 105 37.1
EL10Ac3g07357 Beta vulgaris HOM05D000535 ORTHO05D000427 2.1e-12 77.0 151 31.1
EL10Ac3g06703 Beta vulgaris HOM05D009425 ORTHO05D000427 7.8e-12 75.1 172 33.7
EL10Ac3g06705 Beta vulgaris HOM05D009425 ORTHO05D000427 1.3e-11 74.3 177 29.9
Ah.04g155680 Amaranthus hybridus HOM05D000535 ORTHO05D000427 1.9e-10 70.5 163 29.4
EL10Ac3g07353 Beta vulgaris HOM05D000535 ORTHO05D000427 3.3e-10 69.7 122 32.8
EL10Ac6g13199 Beta vulgaris HOM05D000535 ORTHO05D000427 3.3e-10 69.7 162 30.9
EL10Ac3g06694 Beta vulgaris HOM05D009425 ORTHO05D000427 4.3e-10 69.3 174 29.3
Ah.01g016070 Amaranthus hybridus HOM05D036791 ORTHO05D060553 1.2e-07 61.2 183 27.9
Ah.02g122250 Amaranthus hybridus HOM05D009425 ORTHO05D000427 1.5e-07 60.8 109 33.0
Prupe.5G074500 Prunus persica HOM05D000535 ORTHO05D000427 1.5e-07 60.8 174 30.5
Ciclev10016767m.g Citrus clementina HOM05D000535 ORTHO05D000427 5.8e-07 58.9 170 31.2
Ah.01g016060 Amaranthus hybridus HOM05D036791 ORTHO05D011300 1.3e-06 57.8 160 27.5
Ah.01g004790 Amaranthus hybridus HOM05D036791 ORTHO05D060361 1.7e-06 57.4 176 27.3
EL10Ac6g13202 Beta vulgaris HOM05D000535 ORTHO05D000427 1.7e-06 57.4 155 25.8
Hma1.2p1_0816F.1_g222920 Hydrangea macrophylla HOM05D000535 ORTHO05D000427 1.7e-06 57.4 181 28.2
Sc14g0008220 Simmondsia chinensis HOM05D000535 ORTHO05D000427 1.7e-06 57.4 179 27.4
VMungo1383G2104 Vigna mungo HOM05D010343 ORTHO05D011300 1.7e-06 57.4 154 26.6
Hma1.2p1_0135F.1_g061615 Hydrangea macrophylla HOM05D000535 ORTHO05D000427 3.7e-06 56.2 149 28.9
Hma1.2p1_0135F.1_g061660 Hydrangea macrophylla HOM05D000535 ORTHO05D000427 3.7e-06 56.2 149 28.9
Hma1.2p1_1624F.1_g294266 Hydrangea macrophylla HOM05D000535 ORTHO05D000427 3.7e-06 56.2 149 28.9


User provided reference genes

Program Settings