Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.07g208910 Amaranthus hybridus HOM05D005596 ORTHO05D006994 8.0e-79 297.0 145 100.0
AUR62016035 Chenopodium quinoa HOM05D005596 ORTHO05D006994 2.1e-42 176.0 144 64.6
AUR62021241 Chenopodium quinoa HOM05D005596 ORTHO05D006994 3.0e-41 172.2 143 62.9
Hund04701 Selenicereus undatus HOM05D005596 ORTHO05D006994 3.0e-41 172.2 127 66.1
BraA02t06264Z Brassica rapa HOM05D005596 ORTHO05D006994 3.8e-36 155.2 135 59.3
Lsat_1_v5_gn_8_7641 Lactuca sativa HOM05D005596 ORTHO05D006994 4.9e-36 154.8 126 58.7
FAN03G2823 Fragaria x ananassa HOM05D005596 ORTHO05D006994 8.4e-36 154.1 117 65.8
RcHm_v2.0_Chr1g0376671 Rosa chinensis HOM05D005596 ORTHO05D006994 1.9e-35 152.9 111 67.6
Sabra12G0100700 Salix brachista HOM05D005596 ORTHO05D006994 1.9e-35 152.9 127 60.6
Carub.0008s1212 Capsella rubella HOM05D005596 ORTHO05D006994 2.4e-35 152.5 131 60.3
FAN10G2089 Fragaria x ananassa HOM05D005596 ORTHO05D006994 2.4e-35 152.5 117 65.0
FAN10G3222 Fragaria x ananassa HOM05D005596 ORTHO05D006994 2.4e-35 152.5 117 65.0
AL8G26370 Arabidopsis lyrata HOM05D005596 ORTHO05D006994 4.2e-35 151.8 131 57.3
FAN06G1108 Fragaria x ananassa HOM05D005596 ORTHO05D006994 7.1e-35 151.0 117 64.1
FAN06G4254 Fragaria x ananassa HOM05D005596 ORTHO05D006994 7.1e-35 151.0 117 64.1
Atru.chr1.530 Acer truncatum HOM05D005596 ORTHO05D006994 1.2e-34 150.2 100 71.0
Glyma.10G239200 Glycine max HOM05D005596 ORTHO05D006994 1.2e-34 150.2 117 59.8
vmacro06726 Vaccinium macrocarpon HOM05D005596 ORTHO05D006994 1.2e-34 150.2 140 53.6
Potri.012G133900 Populus trichocarpa HOM05D005596 ORTHO05D006994 1.6e-34 149.8 116 62.9
GSVIVG01010628001 Vitis vinifera HOM05D005596 ORTHO05D006994 1.6e-34 149.8 120 60.8
vmacro06733 Vaccinium macrocarpon HOM05D005596 ORTHO05D006994 2.1e-34 149.4 107 63.6
MD01G1196400 Malus domestica HOM05D005596 ORTHO05D006994 2.7e-34 149.1 116 62.9
CANSAT21G1758 Cannabis sativa HOM05D005596 ORTHO05D006994 3.5e-34 148.7 128 57.8
PSO478G4610 Papaver somniferum HOM05D005596 ORTHO05D006994 3.5e-34 148.7 140 56.4
Sp6g14270 Schrenkiella parvula HOM05D005596 ORTHO05D006994 3.5e-34 148.7 132 57.6
Oeu022544.2 Olea europaea HOM05D005596 ORTHO05D006994 4.6e-34 148.3 132 55.3
QL09p015809 Quercus lobata HOM05D005596 ORTHO05D006994 4.6e-34 148.3 128 56.2
THA.LOC104811480 Tarenaya hassleriana HOM05D005596 ORTHO05D006994 4.6e-34 148.3 131 57.3
Haze_13762 Corylus avellana HOM05D005596 ORTHO05D006994 6.0e-34 147.9 102 67.6
Dinv35175 Davidia involucrata HOM05D005596 ORTHO05D006994 6.0e-34 147.9 130 60.0
Nn6g34264 Nelumbo nucifera HOM05D005596 ORTHO05D006994 6.0e-34 147.9 134 54.5
CSS0004859 Camellia sinensis var. sinensis HOM05D005596 ORTHO05D006994 7.9e-34 147.5 146 52.7
Thhalv10013712m.g Eutrema salsugineum HOM05D005596 ORTHO05D006994 7.9e-34 147.5 133 57.1
Manes.06G143300 Manihot esculenta HOM05D005596 ORTHO05D006994 1.0e-33 147.1 113 61.9
TPR.G17416 Trifolium pratense HOM05D005596 ORTHO05D006994 1.0e-33 147.1 100 66.0
HanXRQChr13g0405601 Helianthus annuus HOM05D005596 ORTHO05D006994 1.3e-33 146.7 121 60.3
PSO782G2992 Papaver somniferum HOM05D005596 ORTHO05D006994 1.3e-33 146.7 140 55.7
QL09p016062 Quercus lobata HOM05D005596 ORTHO05D006994 1.3e-33 146.7 128 55.5
VMungo0720G0093 Vigna mungo HOM05D005596 ORTHO05D006994 1.3e-33 146.7 100 67.0
CSS0017210 Camellia sinensis var. sinensis HOM05D005596 ORTHO05D006994 1.8e-33 146.4 146 52.7
Cfa008275 Carpinus fangiana HOM05D005596 ORTHO05D006994 1.8e-33 146.4 102 66.7
Ciclev10005112m.g Citrus clementina HOM05D005596 ORTHO05D006994 1.8e-33 146.4 129 58.1
TWI39G0482 Tripterygium wilfordii HOM05D005596 ORTHO05D006994 2.3e-33 146.0 117 59.0
Aa31LG3G8420 Aethionema arabicum HOM05D005596 ORTHO05D006994 3.0e-33 145.6 139 56.8
Duzib205G1479 Durio zibethinus HOM05D005596 ORTHO05D006994 3.0e-33 145.6 116 61.2
Ca_10798_v3 Cicer arietinum L. HOM05D005596 ORTHO05D006994 3.9e-33 145.2 120 60.8
Medtr1g101540 Medicago truncatula HOM05D005596 ORTHO05D006994 3.9e-33 145.2 130 53.1
BolC2t08136H Brassica oleracea HOM05D005596 ORTHO05D006994 5.1e-33 144.8 127 58.3
CiPaw.03G102200 Carya illinoinensis HOM05D005596 ORTHO05D006994 5.1e-33 144.8 126 57.9
Psat6g200160 Pisum sativum HOM05D005596 ORTHO05D006994 5.1e-33 144.8 100 65.0
A02p12010 Brassica napus HOM05D005596 ORTHO05D006994 6.7e-33 144.4 127 58.3
CARHR264960 Cardamine hirsuta HOM05D005596 ORTHO05D006994 6.7e-33 144.4 133 54.9
Sed0010012 Sechium edule HOM05D005596 ORTHO05D006994 6.7e-33 144.4 126 58.7
Aqoxy7G00457 Aquilegia oxysepala HOM05D005596 ORTHO05D006994 8.7e-33 144.1 105 62.9
C02p20060 Brassica napus HOM05D005596 ORTHO05D006994 1.1e-32 143.7 127 58.3
MELO3C006872.2 Cucumis melo HOM05D005596 ORTHO05D006994 1.5e-32 143.3 123 62.6
Lalb_Chr06g0160971 Lupinus albus HOM05D005596 ORTHO05D006994 1.5e-32 143.3 133 54.9
Rhsim03G0176700 Rhododendron simsii HOM05D005596 ORTHO05D006994 1.9e-32 142.9 110 59.1
PGSC0003DMG400014264 Solanum tuberosum HOM05D005596 ORTHO05D006994 1.9e-32 142.9 103 60.2
BcaC03g14556 Brassica carinata HOM05D005596 ORTHO05D006994 2.5e-32 142.5 127 57.5
Solyc03g026260.3 Solanum lycopersicum HOM05D005596 ORTHO05D006994 2.5e-32 142.5 101 61.4
Cc02_g03410 Coffea canephora HOM05D005596 ORTHO05D006994 3.3e-32 142.1 108 62.0
DCAR_018164 Daucus carota HOM05D005596 ORTHO05D006994 3.3e-32 142.1 99 64.6
AL960U10010 Arabidopsis lyrata HOM05D005596 ORTHO05D006994 4.3e-32 141.7 130 56.9
CsaV3_3G016780 Cucumis sativus L. HOM05D005596 ORTHO05D006994 5.6e-32 141.4 125 60.8
Gohir.D09G040500 Gossypium hirsutum HOM05D005596 ORTHO05D006994 5.6e-32 141.4 126 57.1
Gorai.006G046300 Gossypium raimondii HOM05D005596 ORTHO05D006994 5.6e-32 141.4 126 57.1
Peaxi162Scf00648g00016 Petunia axillaris HOM05D005596 ORTHO05D006994 5.6e-32 141.4 134 50.7
Actinidia34077 Actinidia chinensis HOM05D005596 ORTHO05D006994 7.4e-32 141.0 116 56.0
LjContig00238g0007789 Lotus japonicus HOM05D005596 ORTHO05D006994 9.6e-32 140.6 100 65.0
PGR142G4172 Punica granatum HOM05D005596 ORTHO05D006994 9.6e-32 140.6 104 62.5
Thecc.03G170100 Theobroma cacao HOM05D005596 ORTHO05D006994 9.6e-32 140.6 126 55.6
Cpa.g.sc107.2 Carica papaya HOM05D005596 ORTHO05D006994 1.3e-31 140.2 113 59.3
CDE11G1004 Ceratophyllum demersum HOM05D005596 ORTHO05D006994 1.3e-31 140.2 138 55.1
TAR375G0353 Trochodendron aralioides HOM05D005596 ORTHO05D006994 1.3e-31 140.2 100 64.0
BcaB05g23951 Brassica carinata HOM05D005596 ORTHO05D006994 1.6e-31 139.8 129 55.8
Eucgr.K00221 Eucalyptus grandis HOM05D005596 ORTHO05D006994 2.8e-31 139.0 103 64.1
CAN.G548.12 Capsicum annuum HOM05D005596 ORTHO05D006994 4.8e-31 138.3 105 60.0
Nitab4.5_0001083g0020 Nicotiana tabacum HOM05D005596 ORTHO05D006994 4.0e-30 135.2 121 51.2
unitig_0.g2489 Utricularia gibba HOM05D005596 ORTHO05D006994 4.0e-30 135.2 121 50.4
Migut.F00380 Erythranthe guttata HOM05D005596 ORTHO05D006994 1.2e-29 133.7 142 50.7
MBI12_g25031_MAGBIO Magnolia biondii HOM05D005596 ORTHO05D006994 1.2e-29 133.7 139 48.9
SalBow4G2853 Salvia bowleyana HOM05D005596 ORTHO05D006994 4.5e-29 131.7 109 53.2
Eucgr.K00218 Eucalyptus grandis HOM05D005596 ORTHO05D006994 1.3e-28 130.2 103 63.1
MSTRG.8768 Avicennia marina HOM05D005596 ORTHO05D006994 2.2e-28 129.4 144 47.2
ClCG05G007790 Citrullus lanatus HOM05D005596 ORTHO05D006994 1.4e-27 126.7 117 57.3
Nitab4.5_0002394g0030 Nicotiana tabacum HOM05D005596 ORTHO05D006994 1.2e-26 123.6 125 50.4
HPP92_020337 Vanilla planifolia HOM05D005596 ORTHO05D006994 4.6e-26 121.7 115 50.4
FAN03G1867 Fragaria x ananassa HOM05D005596 ORTHO05D006994 3.9e-25 118.6 100 59.0
arahy.Tifrunner.gnm1.ann1.EY18QM Arachis hypogaea HOM05D005596 ORTHO05D006994 1.3e-23 113.6 85 61.2
arahy.Tifrunner.gnm1.ann1.8H8JUA Arachis hypogaea HOM05D005596 ORTHO05D006994 1.6e-23 113.2 85 61.2
ECA233G5181 Erigeron canadensis HOM05D005596 ORTHO05D006994 2.4e-22 109.4 102 53.9
Zm00001eb037540 Zea mays HOM05D005596 ORTHO05D006994 6.9e-22 107.8 101 47.5
Pp3c25_14680 Physcomitrium patens HOM05D005596 ORTHO05D006994 1.9e-16 89.7 116 38.8
ATR0757G105 Amborella trichopoda HOM05D005596 ORTHO05D006994 2.5e-16 89.4 114 40.4
Cre16.g677800 Chlamydomonas reinhardtii HOM05D005596 ORTHO05D006994 1.1e-14 84.0 100 44.0
AagrBONN_evm.TU.Sc2ySwM_344.2862 Anthoceros agrestis HOM05D005596 ORTHO05D006994 6.9e-14 81.3 99 41.4
CBR_g7940 Chara braunii HOM05D000019 ORTHO05D000048 1.5e-13 80.1 99 39.4
Mapoly0043s0066 Marchantia polymorpha HOM05D005596 ORTHO05D006994 1.7e-12 76.6 123 32.5
SMO367G0553 Selaginella moellendorffii HOM05D005596 ORTHO05D006994 3.8e-12 75.5 102 37.3
SMO343G0141 Selaginella moellendorffii HOM05D005596 ORTHO05D006994 3.3e-08 62.4 73 41.1


User provided reference genes

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