Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.07g206490 Amaranthus hybridus HOM05D002465 ORTHO05D005308 0.0e+00 1162.1 596 100.0
EL10Ac3g05400 Beta vulgaris HOM05D002465 ORTHO05D005308 2.4e-254 882.1 586 76.5
AUR62021107 Chenopodium quinoa HOM05D002465 ORTHO05D005308 9.8e-240 833.6 591 74.3
AUR62031432 Chenopodium quinoa HOM05D002465 ORTHO05D005308 7.8e-237 823.9 591 74.1
Hund04793 Selenicereus undatus HOM05D002465 ORTHO05D005308 1.7e-215 753.1 568 67.6
Sc13g0009230 Simmondsia chinensis HOM05D002465 ORTHO05D005308 7.1e-198 694.5 588 61.9
Cfa016295 Carpinus fangiana HOM05D002465 ORTHO05D005308 1.4e-190 670.2 606 57.9
Dinv35264 Davidia involucrata HOM05D002465 ORTHO05D005308 1.0e-188 664.1 548 61.5
Haze_00055 Corylus avellana HOM05D002465 ORTHO05D005308 8.7e-188 661.0 609 57.8
GSVIVG01028829001 Vitis vinifera HOM05D002465 ORTHO05D005308 1.4e-185 653.7 602 58.0
QL09p012529 Quercus lobata HOM05D002465 ORTHO05D005308 2.4e-185 652.9 602 57.1
Ciclev10006841m.g Citrus clementina HOM05D002465 ORTHO05D005308 1.2e-184 650.6 597 59.6
Thecc.03G185500 Theobroma cacao HOM05D002465 ORTHO05D005308 2.0e-184 649.8 600 58.7
Actinidia34161 Actinidia chinensis HOM05D002465 ORTHO05D005308 3.2e-182 642.5 595 55.6
Gorai.008G274000 Gossypium raimondii HOM05D002465 ORTHO05D005308 2.7e-181 639.4 591 57.4
Potri.017G148000 Populus trichocarpa HOM05D002465 ORTHO05D005308 8.7e-180 634.4 590 58.0
Manes.06G153300 Manihot esculenta HOM05D002465 ORTHO05D005308 1.1e-179 634.0 605 56.5
MD01G1209800 Malus domestica HOM05D002465 ORTHO05D005308 1.9e-179 633.3 591 57.2
TWI23G1289 Tripterygium wilfordii HOM05D002465 ORTHO05D005308 2.1e-178 629.8 591 56.9
RcHm_v2.0_Chr1g0378531 Rosa chinensis HOM05D002465 ORTHO05D005308 6.2e-178 628.2 564 58.5
Eucgr.A02722 Eucalyptus grandis HOM05D002465 ORTHO05D005308 8.2e-178 627.9 593 55.6
Prupe.2G301900 Prunus persica HOM05D002465 ORTHO05D005308 1.1e-177 627.5 589 57.6
Aqoxy5G04085 Aquilegia oxysepala HOM05D002465 ORTHO05D005308 6.9e-177 624.8 599 54.9
THA.LOC104811947 Tarenaya hassleriana HOM05D002465 ORTHO05D005308 1.5e-176 623.6 577 56.7
FAN06G0430 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.0e-176 623.2 570 57.5
Sabra17G0123700 Salix brachista HOM05D002465 ORTHO05D005308 2.6e-176 622.9 608 55.4
FvH4_7g30390 Fragaria vesca HOM05D002465 ORTHO05D005308 3.4e-176 622.5 561 57.8
FAN06G3650 Fragaria x ananassa HOM05D002465 ORTHO05D005308 5.8e-176 621.7 570 57.4
Gohir.D12G255900 Gossypium hirsutum HOM05D002465 ORTHO05D005308 1.7e-175 620.2 561 57.8
Sopen12g022610 Solanum pennellii HOM05D002465 ORTHO05D005308 2.2e-175 619.8 597 56.1
TAR374G1583 Trochodendron aralioides HOM05D002465 ORTHO05D005308 2.9e-175 619.4 532 59.8
Nitab4.5_0007593g0010 Nicotiana tabacum HOM05D002465 ORTHO05D005308 1.9e-174 616.7 594 56.1
CAN.G290.13 Capsicum annuum HOM05D002465 ORTHO05D005308 2.5e-174 616.3 595 55.6
FAN10G1435 Fragaria x ananassa HOM05D002465 ORTHO05D005308 5.5e-174 615.1 570 57.2
FAN10G1194 Fragaria x ananassa HOM05D002465 ORTHO05D005308 7.9e-173 611.3 577 56.2
Sabra17G0123300 Salix brachista HOM05D002465 ORTHO05D005308 1.0e-172 610.9 609 54.7
COL.COLO4_30301 Corchorus olitorius HOM05D002465 ORTHO05D005308 8.7e-172 607.8 567 57.7
Migut.F00281 Erythranthe guttata HOM05D002465 ORTHO05D005308 8.7e-172 607.8 593 54.6
DCAR_008895 Daucus carota HOM05D002465 ORTHO05D005308 1.1e-171 607.4 511 59.5
Nn1g01670 Nelumbo nucifera HOM05D002465 ORTHO05D005308 1.1e-171 607.4 504 60.3
Lalb_Chr19g0130571 Lupinus albus HOM05D002465 ORTHO05D005308 2.5e-171 606.3 594 54.9
TPR.G9187 Trifolium pratense HOM05D002465 ORTHO05D005308 3.3e-171 605.9 601 55.9
FAN03G3136 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.3e-170 604.0 592 54.9
Medtr6g052330 Medicago truncatula HOM05D002465 ORTHO05D005308 1.3e-170 604.0 599 55.4
Nitab4.5_0008234g0010 Nicotiana tabacum HOM05D002465 ORTHO05D005308 1.3e-170 604.0 605 54.7
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 2.8e-170 602.8 550 56.9
Cpa.g.sc107.121 Carica papaya HOM05D002465 ORTHO05D005308 8.2e-170 601.3 602 56.0
Rhsim03G0191700 Rhododendron simsii HOM05D002465 ORTHO05D005308 1.4e-169 600.5 508 58.5
BcaB05g21981 Brassica carinata HOM05D002465 ORTHO05D005308 3.4e-168 595.9 579 54.2
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 3.4e-168 595.9 574 54.9
Cc02_g02290 Coffea canephora HOM05D002465 ORTHO05D005308 4.5e-168 595.5 623 51.8
PGR042G3288 Punica granatum HOM05D002465 ORTHO05D005308 4.5e-168 595.5 569 53.4
HanXRQChr15g0494161 Helianthus annuus HOM05D002465 ORTHO05D005308 5.9e-168 595.1 597 54.3
BcaC03g14499 Brassica carinata HOM05D002465 ORTHO05D005308 1.7e-167 593.6 579 54.2
Oeu036031.1 Olea europaea HOM05D002465 ORTHO05D005308 2.2e-167 593.2 591 54.3
PSO170G2577 Papaver somniferum HOM05D002465 ORTHO05D005308 2.2e-167 593.2 600 52.3
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 5.0e-167 592.0 574 54.7
CiPaw.05G261600 Carya illinoinensis HOM05D002465 ORTHO05D005308 5.0e-167 592.0 486 62.3
Glyma.09G129600 Glycine max HOM05D002465 ORTHO05D005308 8.5e-167 591.3 606 52.8
SalBow4G2218 Salvia bowleyana HOM05D002465 ORTHO05D005308 4.2e-166 589.0 568 53.2
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 5.5e-166 588.6 572 54.7
MBI04_g26956_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D005308 7.2e-166 588.2 518 57.7
Duzib205G0901 Durio zibethinus HOM05D002465 ORTHO05D005308 9.4e-166 587.8 561 56.5
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 2.1e-165 586.6 560 55.2
Lsat_1_v5_gn_9_56800 Lactuca sativa HOM05D002465 ORTHO05D005308 2.7e-165 586.3 559 54.7
Thhalv10012991m.g Eutrema salsugineum HOM05D002465 ORTHO05D005308 6.1e-165 585.1 572 54.9
Lj2g0016146 Lotus japonicus HOM05D002465 ORTHO05D005308 7.9e-165 584.7 599 53.1
Carub.0008s1296 Capsella rubella HOM05D002465 ORTHO05D005308 1.5e-163 580.5 570 54.6
ECA232G4104 Erigeron canadensis HOM05D002465 ORTHO05D005308 1.5e-163 580.5 588 53.9
AL8G27230 Arabidopsis lyrata HOM05D002465 ORTHO05D005308 2.0e-163 580.1 573 55.8
SGA_v2.0_scaffold60G21117 Striga asiatica HOM05D002465 ORTHO05D005308 2.5e-163 579.7 585 52.5
ClCG05G008450 Citrullus lanatus HOM05D002465 ORTHO05D005308 1.3e-162 577.4 581 54.2
Sed0022656 Sechium edule HOM05D002465 ORTHO05D005308 3.7e-162 575.9 588 54.6
Psat0s1684g0080 Pisum sativum HOM05D002465 ORTHO05D005308 2.4e-161 573.2 566 53.9
CsaV3_3G017530 Cucumis sativus L. HOM05D002465 ORTHO05D005308 4.1e-161 572.4 580 53.1
Atru.BG.183.p Acer truncatum HOM05D002465 ORTHO05D005308 6.9e-161 571.6 426 66.4
Aa31LG3G9040 Aethionema arabicum HOM05D002465 ORTHO05D005308 2.0e-160 570.1 632 50.3
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 7.7e-160 568.2 594 53.2
AT5G52800 Arabidopsis thaliana HOM05D002465 ORTHO05D005308 1.7e-159 567.0 553 56.1
vmacro06621 Vaccinium macrocarpon HOM05D002465 ORTHO05D005308 3.2e-158 562.8 455 61.3
unitig_52.g17726 Utricularia gibba HOM05D002465 ORTHO05D005308 7.2e-158 561.6 524 55.2
Gohir.A12G253600 Gossypium hirsutum HOM05D002465 ORTHO05D005308 2.3e-156 556.6 592 51.7
Hma1.2p1_0274F.1_g110040 Hydrangea macrophylla HOM05D002465 ORTHO05D005308 4.5e-152 542.3 564 52.3
Os07g0467900 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D005308 7.7e-152 541.6 553 51.4
SHI09096 Sapria himalayana HOM05D002465 ORTHO05D005308 1.3e-151 540.8 469 58.4
Phvul.004G106200 Phaseolus vulgaris HOM05D002465 ORTHO05D005308 1.2e-149 534.3 489 57.9
DCAR_029292 Daucus carota HOM05D002465 ORTHO05D005308 1.8e-148 530.4 472 54.4
ATR0661G279 Amborella trichopoda HOM05D002465 ORTHO05D005308 5.2e-148 528.9 559 49.9
FAN01G1269 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.5e-147 527.3 593 51.1
DCAR_018565 Daucus carota HOM05D002465 ORTHO05D005308 4.4e-147 525.8 487 53.2
HPP92_015081 Vanilla planifolia HOM05D002465 ORTHO05D005308 8.5e-143 511.5 492 55.9
arahy.Tifrunner.gnm1.ann1.77GMEU Arachis hypogaea HOM05D002465 ORTHO05D005308 9.4e-142 508.1 596 49.7
Peaxi162Scf00023g00823 Petunia axillaris HOM05D002465 ORTHO05D005308 8.0e-141 505.0 441 57.8
Medtr6g052340 Medicago truncatula HOM05D002465 ORTHO05D005308 2.3e-140 503.4 383 64.8
arahy.Tifrunner.gnm1.ann1.TJ5MNL Arachis hypogaea HOM05D002465 ORTHO05D005308 1.6e-136 490.7 430 59.5
MELO3C006956.2 Cucumis melo HOM05D002465 ORTHO05D005308 1.6e-136 490.7 578 48.6
Mapoly0051s0060 Marchantia polymorpha HOM05D002465 ORTHO05D005308 2.8e-130 469.9 567 45.5
Pp3c1_12340 Physcomitrium patens HOM05D002465 ORTHO05D005308 4.4e-123 446.0 568 45.1
AagrBONN_evm.TU.Sc2ySwM_228.3313 Anthoceros agrestis HOM05D002465 ORTHO05D005308 2.0e-120 437.2 548 44.9
CSS0029570 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D005308 1.1e-110 404.8 331 61.3
RcHm_v2.0_Chr3g0497461 Rosa chinensis HOM05D002465 ORTHO05D005308 7.3e-110 402.1 357 58.0
MSTRG.8702 Avicennia marina HOM05D002465 ORTHO05D005308 1.2e-104 384.8 320 60.0
Ca_26606_v3 Cicer arietinum L. HOM05D002465 ORTHO05D005308 3.3e-102 376.7 570 41.2
Sabra17G0121400 Salix brachista HOM05D002465 ORTHO05D005308 1.1e-100 371.7 284 65.1
SMO103G0001 Selaginella moellendorffii HOM05D002465 ORTHO05D005308 4.9e-98 362.8 395 46.8
CBR_g36403 Chara braunii HOM05D002465 ORTHO05D005308 6.4e-98 362.5 482 42.3
CANSAT21G2443 Cannabis sativa HOM05D002465 ORTHO05D005308 9.0e-84 315.5 315 54.9
VMungo0464G1215 Vigna mungo HOM05D002465 ORTHO05D005308 1.4e-76 291.6 274 55.8
DCAR_005086 Daucus carota HOM05D002465 ORTHO05D005308 1.9e-73 281.2 333 43.5
SEGI_25618 Sequoiadendron giganteum HOM05D002465 ORTHO05D005308 4.8e-69 266.5 197 62.9
MCO12G313 Micromonas commoda HOM05D002465 ORTHO05D005308 7.9e-64 249.2 392 37.5
DCAR_030059 Daucus carota HOM05D002465 ORTHO05D005308 1.5e-62 245.0 183 59.6
MSTRG.8701 Avicennia marina HOM05D002465 ORTHO05D005308 1.5e-59 235.0 254 48.4
DCAR_029376 Daucus carota HOM05D002465 ORTHO05D005308 2.0e-59 234.6 155 63.9
FAN05G2518 Fragaria x ananassa HOM05D002465 ORTHO05D005308 5.0e-58 229.9 162 67.3
FAN09G4610 Fragaria x ananassa HOM05D002465 ORTHO05D005308 5.0e-58 229.9 162 67.3
FAN10G2552 Fragaria x ananassa HOM05D002465 ORTHO05D005308 5.0e-58 229.9 162 67.3
FAN25G3664 Fragaria x ananassa HOM05D002465 ORTHO05D005308 5.0e-58 229.9 162 67.3
Zm00001eb320240 Zea mays HOM05D002465 ORTHO05D005308 1.1e-52 212.2 234 45.7
CSS0047166 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D005308 9.0e-52 209.1 205 52.7
MD01G1209700 Malus domestica HOM05D002465 ORTHO05D005308 3.6e-48 197.2 250 48.4
Oeu058603.1 Olea europaea HOM05D002465 ORTHO05D005308 3.6e-40 170.6 171 52.6
PRCOL_00005773 Prasinoderma coloniale HOM05D002465 ORTHO05D005308 3.6e-40 170.6 513 28.7
HPP92_028543 Vanilla planifolia HOM05D002465 ORTHO05D005308 3.6e-40 170.6 111 67.6
Actinidia08585 Actinidia chinensis HOM05D002465 ORTHO05D005308 7.7e-35 152.9 115 60.0
Actinidia08586 Actinidia chinensis HOM05D002465 ORTHO05D008860 2.2e-34 151.4 223 41.7
Cre17.g705150 Chlamydomonas reinhardtii HOM05D002465 ORTHO05D005308 1.4e-31 142.1 362 29.0
DCAR_030105 Daucus carota HOM05D002465 ORTHO05D005308 8.8e-31 139.4 231 35.5
FAN03G1432 Fragaria x ananassa HOM05D002465 ORTHO05D005308 7.7e-27 126.3 162 46.3
FAN09G0727 Fragaria x ananassa HOM05D002465 ORTHO05D005308 7.7e-27 126.3 162 46.3
FAN09G3189 Fragaria x ananassa HOM05D002465 ORTHO05D005308 7.7e-27 126.3 162 46.3
FAN14G0324 Fragaria x ananassa HOM05D002465 ORTHO05D005308 7.7e-27 126.3 162 46.3
FAN16G1547 Fragaria x ananassa HOM05D002465 ORTHO05D005308 7.7e-27 126.3 162 46.3
FAN21G0521 Fragaria x ananassa HOM05D002465 ORTHO05D005308 7.7e-27 126.3 162 46.3
FAN22G1212 Fragaria x ananassa HOM05D002465 ORTHO05D005308 7.7e-27 126.3 162 46.3
FAN25G1827 Fragaria x ananassa HOM05D002465 ORTHO05D005308 7.7e-27 126.3 162 46.3
FAN25G2717 Fragaria x ananassa HOM05D002465 ORTHO05D005308 7.7e-27 126.3 162 46.3
FAN27G0148 Fragaria x ananassa HOM05D002465 ORTHO05D005308 7.7e-27 126.3 162 46.3
FAN27G0541 Fragaria x ananassa HOM05D002465 ORTHO05D005308 7.7e-27 126.3 162 46.3
FAN27G0848 Fragaria x ananassa HOM05D002465 ORTHO05D005308 7.7e-27 126.3 162 46.3
FAN28G0992 Fragaria x ananassa HOM05D002465 ORTHO05D005308 7.7e-27 126.3 162 46.3
RcHm_v2.0_Chr1g0361031 Rosa chinensis HOM05D002465 ORTHO05D005308 2.5e-25 121.3 73 72.6
Psat0s1616g0040 Pisum sativum HOM05D002465 ORTHO05D005308 5.5e-25 120.2 131 48.1
SEGI_28877 Sequoiadendron giganteum HOM05D002465 ORTHO05D005308 4.7e-24 117.1 148 39.9
CBR_g81559 Chara braunii HOM05D002465 ORTHO05D005308 2.8e-21 107.8 171 37.4
Sabra18G0007300 Salix brachista HOM05D002718 ORTHO05D003269 2.7e-19 101.3 78 64.1
Rhsim10G0052100 Rhododendron simsii HOM05D002465 ORTHO05D036401 1.0e-18 99.4 91 52.7
vmacro06620 Vaccinium macrocarpon HOM05D002465 ORTHO05D005308 4.2e-17 94.0 150 35.3
CBR_g19350 Chara braunii HOM05D000019 ORTHO05D000048 2.3e-15 88.2 167 32.9
Nitab4.5_0007593g0030 Nicotiana tabacum HOM05D002465 ORTHO05D005308 2.2e-13 81.6 45 75.6
Sabra17G0121500 Salix brachista HOM05D002465 ORTHO05D005308 6.3e-13 80.1 104 49.0
FAN23G0684 Fragaria x ananassa HOM05D002465 ORTHO05D000592 5.4e-12 77.0 161 34.8
Cre12.g553253 Chlamydomonas reinhardtii HOM05D002465 ORTHO05D145954 1.9e-09 68.6 72 44.4
PSO063G0346 Papaver somniferum HOM05D002465 ORTHO05D005308 2.1e-08 65.1 106 32.1
CBR_g47978 Chara braunii HOM05D002465 ORTHO05D005308 8.0e-08 63.2 112 31.2
RcHm_v2.0_Chr2g0113271 Rosa chinensis HOM05D002465 ORTHO05D050744 1.0e-07 62.8 50 64.0
MBI04_g15062_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D005308 8.9e-07 59.7 139 34.5
VMungo0720G2925 Vigna mungo HOM05D002465 ORTHO05D050744 9.8e-06 56.2 35 68.6


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