Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.07g205310 Amaranthus hybridus HOM05D003086 ORTHO05D003347 1.0e-32 143.3 100 100.0
Ah.13g070480 Amaranthus hybridus HOM05D003086 ORTHO05D003347 4.2e-26 121.3 100 67.0
AUR62006063 Chenopodium quinoa HOM05D003086 ORTHO05D003347 8.7e-24 113.6 68 85.3
AUR62035564 Chenopodium quinoa HOM05D003086 ORTHO05D003347 8.7e-24 113.6 68 85.3
EL10Ac3g05245 Beta vulgaris HOM05D003086 ORTHO05D003347 2.8e-22 108.6 100 61.0
Gorai.004G151100 Gossypium raimondii HOM05D003086 ORTHO05D003347 2.3e-08 62.4 42 69.0
Gohir.A08G124800 Gossypium hirsutum HOM05D003086 ORTHO05D003347 3.9e-08 61.6 42 66.7
Gohir.D11G103100 Gossypium hirsutum HOM05D003086 ORTHO05D003347 1.5e-07 59.7 41 65.9
Gorai.007G110300 Gossypium raimondii HOM05D003086 ORTHO05D003347 1.5e-07 59.7 41 65.9
COL.COLO4_06232 Corchorus olitorius HOM05D003086 ORTHO05D003347 1.9e-07 59.3 41 65.9
Thecc.01G339800 Theobroma cacao HOM05D003086 ORTHO05D003347 2.5e-07 58.9 67 52.2
Gohir.A11G098500 Gossypium hirsutum HOM05D003086 ORTHO05D003347 4.3e-07 58.2 41 63.4
TAR629G1883 Trochodendron aralioides HOM05D003086 ORTHO05D003347 7.4e-07 57.4 41 65.9
Sabra02G0139700 Salix brachista HOM05D003086 ORTHO05D003347 1.3e-06 56.6 61 52.5
Atru.chr5.701 Acer truncatum HOM05D003086 ORTHO05D003347 1.6e-06 56.2 67 47.8
SalBow4G0310 Salvia bowleyana HOM05D003086 ORTHO05D003347 2.1e-06 55.8 70 47.1
Ciclev10022804m.g Citrus clementina HOM05D003086 ORTHO05D003347 4.8e-06 54.7 38 65.8
Aqoxy7G00049 Aquilegia oxysepala HOM05D003086 ORTHO05D003347 6.2e-06 54.3 39 61.5
Cpa.g.sc96.51 Carica papaya HOM05D003086 ORTHO05D003347 6.2e-06 54.3 40 62.5
Haze_15678 Corylus avellana HOM05D003086 ORTHO05D003347 6.2e-06 54.3 41 63.4
Peaxi162Scf00618g00332 Petunia axillaris HOM05D003086 ORTHO05D003347 6.2e-06 54.3 68 48.5
Potri.002G173700 Populus trichocarpa HOM05D003086 ORTHO05D003347 6.2e-06 54.3 46 56.5
Sabra14G0073900 Salix brachista HOM05D003086 ORTHO05D003347 6.2e-06 54.3 49 55.1
Rhsim09G0207000 Rhododendron simsii HOM05D003086 ORTHO05D003347 8.2e-06 53.9 69 52.2
TAR375G0287 Trochodendron aralioides HOM05D003086 ORTHO05D003347 8.2e-06 53.9 39 66.7


User provided reference genes

Program Settings