Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.07g204750 Amaranthus hybridus HOM05D011561 ORTHO05D011237 3.1e-41 171.4 88 100.0
Ah.13g070730 Amaranthus hybridus HOM05D008613 ORTHO05D011237 3.7e-18 94.7 90 61.1
Ah.07g204740 Amaranthus hybridus HOM05D011561 ORTHO05D011237 8.2e-18 93.6 89 66.3
EL10Ac3g05185 Beta vulgaris HOM05D008837 ORTHO05D006961 5.7e-11 70.9 95 55.8
EL10Ac3g05184 Beta vulgaris HOM05D008613 ORTHO05D006961 9.7e-11 70.1 97 50.5
AT5G54165 Arabidopsis thaliana HOM05D011561 ORTHO05D011237 1.2e-08 63.2 87 46.0
Sabra15G0003300 Salix brachista HOM05D008837 ORTHO05D006961 1.5e-08 62.8 94 45.7
Thecc.03G208100 Theobroma cacao HOM05D018669 ORTHO05D011237 4.5e-08 61.2 88 45.5
AL8G29380 Arabidopsis lyrata HOM05D011561 ORTHO05D011237 7.7e-08 60.5 88 44.3
Gohir.A09G186700 Gossypium hirsutum HOM05D018669 ORTHO05D011237 1.3e-07 59.7 92 44.6
Oeu023688.1 Olea europaea HOM05D008613 ORTHO05D006961 1.7e-07 59.3 88 48.9
Duzib205G1426 Durio zibethinus HOM05D018669 ORTHO05D011237 2.9e-07 58.5 91 44.0
Thhalv10015156m.g Eutrema salsugineum HOM05D011561 ORTHO05D011237 2.9e-07 58.5 88 46.6
Carub.0008s1447 Capsella rubella HOM05D011561 ORTHO05D011237 3.8e-07 58.2 85 44.7
BraA03t10770Z Brassica rapa HOM05D011561 ORTHO05D011237 5.0e-07 57.8 87 43.7
CSS0023145 Camellia sinensis var. sinensis HOM05D008613 ORTHO05D006961 5.0e-07 57.8 88 46.6
Atru.chr9.1866 Acer truncatum HOM05D008613 ORTHO05D006961 8.5e-07 57.0 91 46.2
Hma1.2p1_0415F.1_g148160 Hydrangea macrophylla HOM05D008837 ORTHO05D006961 1.1e-06 56.6 97 46.4
Potri.015G004800 Populus trichocarpa HOM05D008837 ORTHO05D011237 1.1e-06 56.6 94 44.7
CSS0022315 Camellia sinensis var. sinensis HOM05D008613 ORTHO05D006961 1.4e-06 56.2 88 46.6
Ciclev10023060m.g Citrus clementina HOM05D008837 ORTHO05D006961 1.9e-06 55.8 96 44.8
Sp6g16220 Schrenkiella parvula HOM05D011561 ORTHO05D011237 2.5e-06 55.5 84 42.9
THA.LOC104815392 Tarenaya hassleriana HOM05D008703 ORTHO05D006961 2.5e-06 55.5 85 40.0
BcaC01g06288 Brassica carinata HOM05D011561 ORTHO05D011237 3.2e-06 55.1 87 41.4
BcaC01g06291 Brassica carinata HOM05D011561 ORTHO05D011237 3.2e-06 55.1 87 41.4
BolC3t14140H Brassica oleracea HOM05D011561 ORTHO05D011237 3.2e-06 55.1 87 41.4
Manes.05G197800 Manihot esculenta HOM05D008837 ORTHO05D011237 4.2e-06 54.7 89 42.7
Sabra16G0303800 Salix brachista HOM05D008613 ORTHO05D006961 4.2e-06 54.7 91 42.9
Ciclev10017302m.g Citrus clementina HOM05D008837 ORTHO05D011237 5.5e-06 54.3 99 40.4
Sabra16G0303600 Salix brachista HOM05D008613 ORTHO05D006961 5.5e-06 54.3 91 42.9
Actinidia18679 Actinidia chinensis HOM05D008837 ORTHO05D006961 7.2e-06 53.9 97 38.1
Oeu023687.1 Olea europaea HOM05D008613 ORTHO05D006961 7.2e-06 53.9 92 44.6
Sabra16G0303700 Salix brachista HOM05D008613 ORTHO05D006961 7.2e-06 53.9 91 44.0
Oeu061026.1 Olea europaea HOM05D008837 ORTHO05D006961 9.4e-06 53.5 90 43.3


User provided reference genes

Program Settings