Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.07g204150 Amaranthus hybridus HOM05D000546 ORTHO05D000398 9.1e-41 171.0 138 100.0
EL10Ac3g06464 Beta vulgaris HOM05D000546 ORTHO05D000398 2.6e-19 99.8 138 74.6
Sc13g0004630 Simmondsia chinensis HOM05D000546 ORTHO05D000398 5.7e-19 98.6 138 70.3
CARHR098640 Cardamine hirsuta HOM05D000546 ORTHO05D000398 3.7e-18 95.9 134 76.9
Ciclev10005037m.g Citrus clementina HOM05D000546 ORTHO05D000398 8.3e-18 94.7 134 66.4
Dinv44562 Davidia involucrata HOM05D001851 ORTHO05D000398 1.4e-17 94.0 134 72.4
Nn1g02411 Nelumbo nucifera HOM05D000546 ORTHO05D000398 2.4e-17 93.2 134 64.2
Sabra10G0060100 Salix brachista HOM05D000546 ORTHO05D000398 5.4e-17 92.0 134 73.9
Carub.0003s2292 Capsella rubella HOM05D000546 ORTHO05D000398 9.1e-17 91.3 139 74.1
AT3G22800 Arabidopsis thaliana HOM05D000546 ORTHO05D000398 2.7e-16 89.7 134 75.4
AL3G37120 Arabidopsis lyrata HOM05D000546 ORTHO05D000398 5.9e-16 88.6 134 73.9
BraA05t21478Z Brassica rapa HOM05D000546 ORTHO05D000398 1.0e-15 87.8 134 67.9
BcaB04g20500 Brassica carinata HOM05D000546 ORTHO05D000398 1.3e-15 87.4 139 67.6
BcaC09g49198 Brassica carinata HOM05D000546 ORTHO05D000398 1.3e-15 87.4 139 67.6
C01p41500 Brassica napus HOM05D000546 ORTHO05D000398 1.3e-15 87.4 139 67.6
BolC1t04106H Brassica oleracea HOM05D000546 ORTHO05D000398 1.3e-15 87.4 139 67.6
BraA01t03368Z Brassica rapa HOM05D000546 ORTHO05D000398 1.3e-15 87.4 139 67.6
Thhalv10022219m.g Eutrema salsugineum HOM05D000546 ORTHO05D000398 1.3e-15 87.4 139 73.4
Hma1.2p1_0549F.1_g176850 Hydrangea macrophylla HOM05D000546 ORTHO05D000398 1.3e-15 87.4 134 71.6
A05p25920 Brassica napus HOM05D000546 ORTHO05D000398 1.7e-15 87.0 139 66.9
CAN.G1402.10 Capsicum annuum HOM05D000546 ORTHO05D000398 1.7e-15 87.0 135 73.3
TAR362G1258 Trochodendron aralioides HOM05D000546 ORTHO05D000398 1.7e-15 87.0 134 67.9
A01p32420 Brassica napus HOM05D000546 ORTHO05D000398 2.2e-15 86.7 134 68.7
Sp3g20500 Schrenkiella parvula HOM05D000546 ORTHO05D000398 3.8e-15 85.9 139 71.9
BcaC05g28014 Brassica carinata HOM05D000546 ORTHO05D000398 6.5e-15 85.1 134 66.4
C05p40300 Brassica napus HOM05D000546 ORTHO05D000398 6.5e-15 85.1 134 66.4
BolC5t32771H Brassica oleracea HOM05D000546 ORTHO05D000398 6.5e-15 85.1 134 66.4
Dinv14035 Davidia involucrata HOM05D000546 ORTHO05D000398 1.5e-14 84.0 139 67.6
Potri.010G083000 Populus trichocarpa HOM05D000546 ORTHO05D000398 1.5e-14 84.0 134 72.4
Ciclev10004988m.g Citrus clementina HOM05D000546 ORTHO05D000398 1.9e-14 83.6 139 61.9
ECA238G1374 Erigeron canadensis HOM05D000546 ORTHO05D000398 1.9e-14 83.6 135 72.6
Nitab4.5_0000085g0040 Nicotiana tabacum HOM05D000546 ORTHO05D000398 1.9e-14 83.6 135 65.9
BcaB06g26396 Brassica carinata HOM05D000546 ORTHO05D000398 3.2e-14 82.8 139 66.9
MELO3C006506.2 Cucumis melo HOM05D000546 ORTHO05D000398 3.2e-14 82.8 138 68.8
TWI09G0453 Tripterygium wilfordii HOM05D000546 ORTHO05D000398 4.2e-14 82.4 137 64.2
Manes.15G031900 Manihot esculenta HOM05D000546 ORTHO05D000398 5.5e-14 82.0 134 67.9
AUR62033641 Chenopodium quinoa HOM05D000546 ORTHO05D000398 9.4e-14 81.3 124 75.0
CANSAT78G2325 Cannabis sativa HOM05D000546 ORTHO05D000398 1.6e-13 80.5 137 61.3
CARHR098650 Cardamine hirsuta HOM05D000546 ORTHO05D000398 2.1e-13 80.1 138 67.4
Lsat_1_v5_gn_2_117961 Lactuca sativa HOM05D000546 ORTHO05D000398 2.7e-13 79.7 129 72.1
Glyma.10G245100 Glycine max HOM05D000546 ORTHO05D000398 3.6e-13 79.3 157 59.2
Ciclev10010708m.g Citrus clementina HOM05D000546 ORTHO05D000398 6.1e-13 78.6 132 72.7
PSO170G0042 Papaver somniferum HOM05D000546 ORTHO05D000398 6.1e-13 78.6 157 62.4
PSO210G2110 Papaver somniferum HOM05D000546 ORTHO05D000398 1.8e-12 77.0 157 61.8
CDE02G2543 Ceratophyllum demersum HOM05D000546 ORTHO05D000398 4.0e-12 75.9 139 69.8
Thecc.04G236900 Theobroma cacao HOM05D000546 ORTHO05D000398 4.0e-12 75.9 139 66.9
Nitab4.5_0003249g0040 Nicotiana tabacum HOM05D000546 ORTHO05D000398 8.8e-12 74.7 135 64.4
GSVIVG01018025001 Vitis vinifera HOM05D000546 ORTHO05D000398 8.8e-12 74.7 134 68.7
MSTRG.4054 Avicennia marina HOM05D000546 ORTHO05D000398 2.6e-11 73.2 134 63.4
CANSAT78G0158 Cannabis sativa HOM05D000546 ORTHO05D000398 3.4e-11 72.8 137 59.1
Lsat_1_v5_gn_8_93601 Lactuca sativa HOM05D000546 ORTHO05D000398 4.4e-11 72.4 132 67.4
Potri.018G035100 Populus trichocarpa HOM05D000546 ORTHO05D000398 4.4e-11 72.4 136 68.4
VMungo0720G2576 Vigna mungo HOM05D000546 ORTHO05D000398 7.5e-11 71.6 134 64.9
CARHR187830 Cardamine hirsuta HOM05D000546 ORTHO05D000398 1.3e-10 70.9 139 57.6
AUR62033644 Chenopodium quinoa HOM05D000546 ORTHO05D000398 1.3e-10 70.9 135 66.7
Glyma.20G149500 Glycine max HOM05D000546 ORTHO05D000398 2.2e-10 70.1 134 66.4
Phvul.007G060800 Phaseolus vulgaris HOM05D000546 ORTHO05D000398 2.2e-10 70.1 134 64.2
HanXRQChr07g0201711 Helianthus annuus HOM05D000546 ORTHO05D000398 3.7e-10 69.3 135 64.4
Potri.010G083100 Populus trichocarpa HOM05D000546 ORTHO05D000398 3.7e-10 69.3 134 67.2
Duzib151G0178 Durio zibethinus HOM05D000546 ORTHO05D000398 4.9e-10 68.9 139 63.3
CSS0020397 Camellia sinensis var. sinensis HOM05D000546 ORTHO05D000398 8.3e-10 68.2 135 68.9
Oeu053308.1 Olea europaea HOM05D000546 ORTHO05D000398 8.3e-10 68.2 45 62.2
RcHm_v2.0_Chr4g0387491 Rosa chinensis HOM05D000546 ORTHO05D000398 1.1e-09 67.8 125 70.4
Thhalv10004209m.g Eutrema salsugineum HOM05D000546 ORTHO05D000398 1.4e-09 67.4 134 58.2
Sabra10G0059900 Salix brachista HOM05D000546 ORTHO05D000398 1.8e-09 67.0 135 65.9
AL6G37370 Arabidopsis lyrata HOM05D000546 ORTHO05D000398 2.4e-09 66.6 134 58.2
Aqoxy2G03442 Aquilegia oxysepala HOM05D000546 ORTHO05D000398 3.1e-09 66.2 45 64.4
BolC7t44755H Brassica oleracea HOM05D000546 ORTHO05D000398 3.1e-09 66.2 134 65.7
MBI05_g15477_MAGBIO Magnolia biondii HOM05D000546 ORTHO05D000398 3.1e-09 66.2 134 64.2
Peaxi162Scf00520g00051 Petunia axillaris HOM05D000546 ORTHO05D000398 4.1e-09 65.9 158 60.8
Psat6g205760 Pisum sativum HOM05D000546 ORTHO05D000398 4.1e-09 65.9 152 54.6
QL12p031073 Quercus lobata HOM05D000546 ORTHO05D000398 4.1e-09 65.9 135 34.1
SGA_v2.0_scaffold151G36694 Striga asiatica HOM05D000546 ORTHO05D000398 4.1e-09 65.9 114 71.9
Actinidia40124 Actinidia chinensis HOM05D001851 ORTHO05D002237 5.4e-09 65.5 139 66.2
Aa31LG11G4640 Aethionema arabicum HOM05D000546 ORTHO05D000398 5.4e-09 65.5 139 63.3
A06p36260 Brassica napus HOM05D000546 ORTHO05D000398 5.4e-09 65.5 134 64.2
BraA06t26548Z Brassica rapa HOM05D000546 ORTHO05D000398 5.4e-09 65.5 134 64.2
Carub.0006s2341 Capsella rubella HOM05D000546 ORTHO05D000398 5.4e-09 65.5 134 57.5
CsaV3_3G012970 Cucumis sativus L. HOM05D000546 ORTHO05D000398 5.4e-09 65.5 138 64.5
Migut.G00374 Erythranthe guttata HOM05D000546 ORTHO05D000398 5.4e-09 65.5 46 58.7
Os03g0795300 Oryza sativa ssp. japonica HOM05D000546 ORTHO05D000398 5.4e-09 65.5 135 62.2
Lj5g0026294 Lotus japonicus HOM05D000546 ORTHO05D000398 7.0e-09 65.1 137 63.5
Sp2g21990 Schrenkiella parvula HOM05D000546 ORTHO05D000398 7.0e-09 65.1 134 58.2
Zm00001eb161110 Zea mays HOM05D000546 ORTHO05D000398 7.0e-09 65.1 135 64.4
COL.COLO4_21544 Corchorus olitorius HOM05D000546 ORTHO05D000398 9.2e-09 64.7 127 67.7
Oeu008864.1 Olea europaea HOM05D000546 ORTHO05D000398 9.2e-09 64.7 45 60.0
Potri.006G245600 Populus trichocarpa HOM05D000546 ORTHO05D000398 9.2e-09 64.7 134 67.9
TWI32G0480 Tripterygium wilfordii HOM05D000546 ORTHO05D000398 9.2e-09 64.7 134 65.7
THA.LOC104827555 Tarenaya hassleriana HOM05D000546 ORTHO05D000398 1.2e-08 64.3 126 69.0
Cc03_g04160 Coffea canephora HOM05D000546 ORTHO05D000398 2.0e-08 63.5 134 53.7
Sed0006716 Sechium edule HOM05D000546 ORTHO05D000398 2.0e-08 63.5 157 52.2
AL166U10020 Arabidopsis lyrata HOM05D000546 ORTHO05D000398 3.5e-08 62.8 119 73.1
AT5G25550 Arabidopsis thaliana HOM05D000546 ORTHO05D000398 3.5e-08 62.8 134 56.0
CSS0015263 Camellia sinensis var. sinensis HOM05D000546 ORTHO05D000398 3.5e-08 62.8 134 67.9
PGR004G0101 Punica granatum HOM05D000546 ORTHO05D000398 3.5e-08 62.8 50 56.0
Zm00001eb283750 Zea mays HOM05D000546 ORTHO05D000398 3.5e-08 62.8 136 62.5
C07p42270 Brassica napus HOM05D000546 ORTHO05D000398 5.9e-08 62.0 134 59.0
Nn5g26950 Nelumbo nucifera HOM05D000546 ORTHO05D000398 5.9e-08 62.0 141 66.0
Cpa.g.sc23.120 Carica papaya HOM05D000546 ORTHO05D000398 7.7e-08 61.6 45 62.2
ClCG11G002540 Citrullus lanatus HOM05D000546 ORTHO05D000398 7.7e-08 61.6 43 65.1
MELO3C004550.2 Cucumis melo HOM05D000546 ORTHO05D000398 7.7e-08 61.6 43 65.1
CsaV3_2G002350 Cucumis sativus L. HOM05D000546 ORTHO05D000398 7.7e-08 61.6 43 65.1
Zm00001eb213010 Zea mays HOM05D000546 ORTHO05D000398 7.7e-08 61.6 139 59.0
arahy.Tifrunner.gnm1.ann1.F05SPM Arachis hypogaea HOM05D000546 ORTHO05D000398 1.0e-07 61.2 45 60.0
Duzib150G0813 Durio zibethinus HOM05D000546 ORTHO05D000398 1.0e-07 61.2 44 63.6
FvH4_4g00870 Fragaria vesca HOM05D000546 ORTHO05D000398 1.0e-07 61.2 133 63.9
QL06p001365 Quercus lobata HOM05D000546 ORTHO05D000398 1.0e-07 61.2 45 57.8
Manes.03G174200 Manihot esculenta HOM05D000546 ORTHO05D000398 1.3e-07 60.8 157 54.1
Zm00001eb346980 Zea mays HOM05D000546 ORTHO05D000398 1.3e-07 60.8 136 62.5
CDE04G3283 Ceratophyllum demersum HOM05D000546 ORTHO05D000398 1.7e-07 60.5 134 64.9
Gohir.D10G154700 Gossypium hirsutum HOM05D000546 ORTHO05D000398 1.7e-07 60.5 134 56.0
Solyc09g082530.3 Solanum lycopersicum HOM05D000546 ORTHO05D000398 1.7e-07 60.5 46 60.9
Manes.16G068900 Manihot esculenta HOM05D000546 ORTHO05D000398 2.3e-07 60.1 135 65.2
BcaC05g25228 Brassica carinata HOM05D000546 ORTHO05D000398 2.9e-07 59.7 134 62.7
Duzib187G1908 Durio zibethinus HOM05D000546 ORTHO05D000398 2.9e-07 59.7 44 63.6
FAN26G2925 Fragaria x ananassa HOM05D000546 ORTHO05D000398 2.9e-07 59.7 48 58.3
FAN28G1144 Fragaria x ananassa HOM05D000546 ORTHO05D000398 2.9e-07 59.7 48 58.3
Zm00001eb060610 Zea mays HOM05D000546 ORTHO05D000398 2.9e-07 59.7 139 59.0
FAN17G1248 Fragaria x ananassa HOM05D000546 ORTHO05D000398 3.8e-07 59.3 122 68.9
Gorai.011G172700 Gossypium raimondii HOM05D000546 ORTHO05D000398 3.8e-07 59.3 45 53.3
Manes.03G174300 Manihot esculenta HOM05D000546 ORTHO05D000398 3.8e-07 59.3 134 66.4
TWI34G0195 Tripterygium wilfordii HOM05D000546 ORTHO05D000398 3.8e-07 59.3 134 63.4
Aqoxy7G03765 Aquilegia oxysepala HOM05D000546 ORTHO05D000398 5.0e-07 58.9 134 66.4
CiPaw.01G197000 Carya illinoinensis HOM05D000546 ORTHO05D000398 5.0e-07 58.9 157 57.3
Eucgr.H03422 Eucalyptus grandis HOM05D000546 ORTHO05D000398 5.0e-07 58.9 134 56.0
Glyma.12G116200 Glycine max HOM05D000546 ORTHO05D000398 5.0e-07 58.9 135 54.8
Hma1.2p1_0018F.1_g013260 Hydrangea macrophylla HOM05D000546 ORTHO05D000398 5.0e-07 58.9 134 64.9
Sed0011918 Sechium edule HOM05D000546 ORTHO05D000398 5.0e-07 58.9 42 64.3
Actinidia20346 Actinidia chinensis HOM05D000546 ORTHO05D000398 6.6e-07 58.5 134 64.9
Aa31LG8G9290 Aethionema arabicum HOM05D000546 ORTHO05D000398 6.6e-07 58.5 44 54.5
Os05g0180300 Oryza sativa ssp. japonica HOM05D000546 ORTHO05D000398 6.6e-07 58.5 137 61.3
Sopen09g031390 Solanum pennellii HOM05D000546 ORTHO05D000398 6.6e-07 58.5 45 60.0
HPP92_018609 Vanilla planifolia HOM05D000546 ORTHO05D000398 6.6e-07 58.5 162 53.1
Zm00001eb105520 Zea mays HOM05D000546 ORTHO05D000398 6.6e-07 58.5 136 61.8
MBI11_g47456_MAGBIO Magnolia biondii HOM05D000546 ORTHO05D000398 8.6e-07 58.2 140 55.7
Sed0007532 Sechium edule HOM05D000546 ORTHO05D000398 8.6e-07 58.2 49 51.0
ATR0626G144 Amborella trichopoda HOM05D000546 ORTHO05D000398 1.1e-06 57.8 139 66.9
Manes.16G070201 Manihot esculenta HOM05D000546 ORTHO05D000398 1.1e-06 57.8 45 55.6
Os01g0594300 Oryza sativa ssp. japonica HOM05D000546 ORTHO05D000398 1.1e-06 57.8 134 62.7
DCAR_024180 Daucus carota HOM05D000546 ORTHO05D000398 1.5e-06 57.4 47 57.4
Migut.G00373 Erythranthe guttata HOM05D000546 ORTHO05D000398 1.5e-06 57.4 131 67.2
FvH4_1g05180 Fragaria vesca HOM05D000546 ORTHO05D000398 1.5e-06 57.4 44 61.4
FAN19G1225 Fragaria x ananassa HOM05D000546 ORTHO05D000398 1.5e-06 57.4 44 61.4
Thecc.09G113200 Theobroma cacao HOM05D000546 ORTHO05D000398 1.5e-06 57.4 41 63.4
Ah.10g029270 Amaranthus hybridus HOM05D000546 ORTHO05D000398 1.9e-06 57.0 45 55.6
Carub.0007s2928 Capsella rubella HOM05D000546 ORTHO05D000398 1.9e-06 57.0 46 58.7
CDE06G2220 Ceratophyllum demersum HOM05D004218 ORTHO05D004938 1.9e-06 57.0 134 63.4
MD17G1236200 Malus domestica HOM05D000546 ORTHO05D000398 1.9e-06 57.0 135 56.3
Phvul.011G115300 Phaseolus vulgaris HOM05D000546 ORTHO05D000398 1.9e-06 57.0 135 56.3
Aqoxy7G01802 Aquilegia oxysepala HOM05D000546 ORTHO05D000398 2.5e-06 56.6 44 56.8
Cfa008458 Carpinus fangiana HOM05D000546 ORTHO05D000398 2.5e-06 56.6 47 53.2
Medtr1g103090 Medicago truncatula HOM05D000546 ORTHO05D000398 2.5e-06 56.6 152 53.9
VMungo0464G0849 Vigna mungo HOM05D000546 ORTHO05D000398 2.5e-06 56.6 44 56.8
C05p11120 Brassica napus HOM05D000546 ORTHO05D000398 3.3e-06 56.2 134 61.2
Haze_25695 Corylus avellana HOM05D000546 ORTHO05D000398 3.3e-06 56.2 45 60.0
Os01g0180000 Oryza sativa ssp. japonica HOM05D000546 ORTHO05D000398 3.3e-06 56.2 136 61.8
Sed0015017 Sechium edule HOM05D000546 ORTHO05D000398 3.3e-06 56.2 42 64.3
TPR.G26098 Trifolium pratense HOM05D000546 ORTHO05D000398 3.3e-06 56.2 138 60.1
CSS0049017 Camellia sinensis var. sinensis HOM05D000546 ORTHO05D000398 4.3e-06 55.8 162 56.2
Manes.15G031800 Manihot esculenta HOM05D000546 ORTHO05D000398 4.3e-06 55.8 134 61.2
Haze_11217 Corylus avellana HOM05D000546 ORTHO05D000398 5.6e-06 55.5 47 53.2
CiPaw.04G166400 Carya illinoinensis HOM05D000546 ORTHO05D000398 7.3e-06 55.1 49 55.1
Lj4g0024065 Lotus japonicus HOM05D000546 ORTHO05D000398 7.3e-06 55.1 45 57.8
TAR636G2768 Trochodendron aralioides HOM05D000546 ORTHO05D000398 7.3e-06 55.1 44 56.8
Zm00001eb122210 Zea mays HOM05D000546 ORTHO05D000398 7.3e-06 55.1 127 63.8
EL10Ac9g20795 Beta vulgaris HOM05D000546 ORTHO05D000398 9.5e-06 54.7 136 60.3
Glyma.09G188600 Glycine max HOM05D000546 ORTHO05D000398 9.5e-06 54.7 44 56.8
Gohir.A05G022050 Gossypium hirsutum HOM05D000546 ORTHO05D000398 9.5e-06 54.7 44 56.8
Gorai.009G023700 Gossypium raimondii HOM05D000546 ORTHO05D000398 9.5e-06 54.7 44 56.8
Os03g0637600 Oryza sativa ssp. japonica HOM05D000546 ORTHO05D000398 9.5e-06 54.7 162 50.6
Peaxi162Scf00121g00003 Petunia axillaris HOM05D001708 ORTHO05D001649 9.5e-06 54.7 130 67.7
Phvul.004G161500 Phaseolus vulgaris HOM05D000546 ORTHO05D000398 9.5e-06 54.7 44 54.5
QL02p085838 Quercus lobata HOM05D000546 ORTHO05D000398 9.5e-06 54.7 45 57.8
Sp3g22250 Schrenkiella parvula HOM05D000546 ORTHO05D000398 9.5e-06 54.7 45 57.8
vmacro08362 Vaccinium macrocarpon HOM05D000546 ORTHO05D000398 9.5e-06 54.7 45 53.3


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