Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.07g204110 Amaranthus hybridus HOM05D007719 ORTHO05D009782 7.1e-248 860.1 433 100.0
AUR62002606 Chenopodium quinoa HOM05D007719 ORTHO05D009782 5.2e-198 694.5 438 81.5
EL10Ac3g06304 Beta vulgaris HOM05D007719 ORTHO05D009782 2.6e-194 682.2 432 81.5
AUR62030024 Chenopodium quinoa HOM05D007719 ORTHO05D009782 1.7e-193 679.5 429 81.4
Hund24987 Selenicereus undatus HOM05D007719 ORTHO05D009782 9.1e-179 630.6 424 76.2
Sc11g0004120 Simmondsia chinensis HOM05D007719 ORTHO05D009782 1.8e-166 589.7 430 71.9
Dinv05161 Davidia involucrata HOM05D007719 ORTHO05D009782 3.1e-166 589.0 392 76.3
CSS0046068 Camellia sinensis var. sinensis HOM05D007719 ORTHO05D009782 4.9e-164 581.6 399 72.9
QL01p001957 Quercus lobata HOM05D007719 ORTHO05D009782 1.9e-163 579.7 393 73.3
Lalb_Chr17g0338681 Lupinus albus HOM05D007719 ORTHO05D009782 1.0e-161 573.9 422 69.7
CiPaw.05G248600 Carya illinoinensis HOM05D007719 ORTHO05D009782 1.3e-161 573.5 401 72.3
TAR629G1042 Trochodendron aralioides HOM05D007719 ORTHO05D009782 2.3e-161 572.8 392 73.7
vmacro10633 Vaccinium macrocarpon HOM05D007719 ORTHO05D009782 8.6e-161 570.9 429 68.5
FAN12G3181 Fragaria x ananassa HOM05D007719 ORTHO05D009782 3.3e-160 568.9 384 74.0
ClCG01G006100 Citrullus lanatus HOM05D007719 ORTHO05D009782 9.5e-160 567.4 379 76.3
FvH4_4g32280 Fragaria vesca HOM05D007719 ORTHO05D009782 9.5e-160 567.4 381 74.3
Atru.chr11.428 Acer truncatum HOM05D007719 ORTHO05D009782 1.2e-159 567.0 410 69.5
Gohir.A12G150300 Gossypium hirsutum HOM05D007719 ORTHO05D009782 2.8e-159 565.8 382 73.6
Gorai.008G166400 Gossypium raimondii HOM05D007719 ORTHO05D009782 2.8e-159 565.8 382 73.3
FAN07G1524 Fragaria x ananassa HOM05D007719 ORTHO05D009782 3.6e-159 565.5 379 74.1
ECA234G0976 Erigeron canadensis HOM05D007719 ORTHO05D009782 4.7e-159 565.1 392 73.5
Psat0s3407g0080 Pisum sativum HOM05D007719 ORTHO05D009782 4.7e-159 565.1 392 72.7
Potri.010G114100 Populus trichocarpa HOM05D007719 ORTHO05D009782 8.0e-159 564.3 383 72.6
Eucgr.G02196 Eucalyptus grandis HOM05D007719 ORTHO05D009782 1.8e-158 563.1 431 69.1
Glyma.09G119300 Glycine max HOM05D007719 ORTHO05D009782 3.1e-158 562.4 381 73.8
MD16G1029600 Malus domestica HOM05D007719 ORTHO05D009782 1.5e-157 560.1 412 70.4
FAN22G2057 Fragaria x ananassa HOM05D007719 ORTHO05D009782 2.0e-157 559.7 422 67.8
Medtr1g030640 Medicago truncatula HOM05D007719 ORTHO05D009782 2.0e-157 559.7 387 72.6
Actinidia36679 Actinidia chinensis HOM05D007719 ORTHO05D009782 2.6e-157 559.3 389 72.0
TWI75G0056 Tripterygium wilfordii HOM05D007719 ORTHO05D009782 3.4e-157 558.9 384 72.1
Sed0008286 Sechium edule HOM05D007719 ORTHO05D009782 4.4e-157 558.5 408 71.3
TPR.G36961 Trifolium pratense HOM05D007719 ORTHO05D009782 1.3e-156 557.0 415 69.6
CsaV3_5G028560 Cucumis sativus L. HOM05D007719 ORTHO05D009782 2.9e-156 555.8 378 74.6
RcHm_v2.0_Chr4g0441071 Rosa chinensis HOM05D007719 ORTHO05D009782 2.9e-156 555.8 412 69.7
PGR119G0428 Punica granatum HOM05D007719 ORTHO05D009782 4.9e-156 555.1 410 69.8
Rhsim09G0099000 Rhododendron simsii HOM05D007719 ORTHO05D009782 4.9e-156 555.1 393 71.2
HanXRQChr17g0566951 Helianthus annuus HOM05D007719 ORTHO05D009782 8.3e-156 554.3 426 68.1
VMungo1215G2618 Vigna mungo HOM05D007719 ORTHO05D009782 8.3e-156 554.3 422 68.2
arahy.Tifrunner.gnm1.ann1.Y8VIVB Arachis hypogaea HOM05D007719 ORTHO05D009782 1.4e-155 553.5 427 67.9
Ca_25710_v3 Cicer arietinum L. HOM05D007719 ORTHO05D009782 1.4e-155 553.5 407 69.8
COL.COLO4_20469 Corchorus olitorius HOM05D007719 ORTHO05D009782 5.4e-155 551.6 412 68.9
Lj2g0007830 Lotus japonicus HOM05D007719 ORTHO05D009782 7.0e-155 551.2 376 72.9
Sabra10G0084100 Salix brachista HOM05D007719 ORTHO05D009782 7.0e-155 551.2 392 69.1
Lsat_1_v5_gn_4_14941 Lactuca sativa HOM05D007719 ORTHO05D009782 9.2e-155 550.8 388 71.6
CAN.G1334.8 Capsicum annuum HOM05D007719 ORTHO05D009782 2.1e-154 549.7 392 71.4
Phvul.003G022800 Phaseolus vulgaris HOM05D007719 ORTHO05D009782 2.1e-154 549.7 392 71.4
Manes.15G114900 Manihot esculenta HOM05D007719 ORTHO05D009782 3.5e-154 548.9 369 73.2
DCAR_030215 Daucus carota HOM05D007719 ORTHO05D009782 4.6e-154 548.5 372 74.2
Sopen05g004110 Solanum pennellii HOM05D007719 ORTHO05D009782 4.6e-154 548.5 400 70.5
MSTRG.23215 Avicennia marina HOM05D007719 ORTHO05D009782 1.7e-153 546.6 393 71.0
Cc11_g08840 Coffea canephora HOM05D007719 ORTHO05D009782 1.7e-153 546.6 423 67.4
Solyc05g008270.3 Solanum lycopersicum HOM05D007719 ORTHO05D009782 3.0e-153 545.8 400 70.0
Oeu034423.3 Olea europaea HOM05D007719 ORTHO05D009782 8.6e-153 544.3 402 69.9
FAN17G2178 Fragaria x ananassa HOM05D007719 ORTHO05D009782 1.9e-152 543.1 369 73.2
Nitab4.5_0004776g0060 Nicotiana tabacum HOM05D007719 ORTHO05D009782 1.8e-150 536.6 367 74.4
PGSC0003DMG400030550 Solanum tuberosum HOM05D007719 ORTHO05D009782 8.9e-150 534.3 400 69.2
ATR0686G226 Amborella trichopoda HOM05D007719 ORTHO05D009782 1.5e-149 533.5 378 70.4
SalBow5G1767 Salvia bowleyana HOM05D007719 ORTHO05D009782 2.6e-149 532.7 385 71.9
Migut.O00274 Erythranthe guttata HOM05D007719 ORTHO05D009782 7.5e-149 531.2 386 72.3
unitig_61.g26194 Utricularia gibba HOM05D007719 ORTHO05D009782 9.2e-147 524.2 367 72.2
SGA_v2.0_scaffold25G10737 Striga asiatica HOM05D007719 ORTHO05D009782 1.0e-145 520.8 413 67.3
arahy.Tifrunner.gnm1.ann1.L198GP Arachis hypogaea HOM05D007719 ORTHO05D009782 8.6e-145 517.7 427 65.3
HPP92_021852 Vanilla planifolia HOM05D007719 ORTHO05D009782 6.2e-143 511.5 381 67.2
Os01g0127400 Oryza sativa ssp. japonica HOM05D007719 ORTHO05D009782 2.4e-142 509.6 376 67.8
SEGI_18275 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 5.8e-141 505.0 407 63.9
Prupe.1G323300 Prunus persica HOM05D007719 ORTHO05D009782 2.7e-138 496.1 353 72.0
Mapoly0070s0076 Marchantia polymorpha HOM05D007719 ORTHO05D009782 5.6e-136 488.4 365 66.3
Peaxi162Scf00205g00122 Petunia axillaris HOM05D007719 ORTHO05D009782 9.6e-136 487.6 385 67.3
Pp3c1_3200 Physcomitrium patens HOM05D007719 ORTHO05D009782 2.9e-132 476.1 374 62.8
SMO236G0033 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 4.9e-132 475.3 362 66.0
SMO236G0110 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 4.9e-132 475.3 362 66.0
MELO3C005317.2 Cucumis melo HOM05D007719 ORTHO05D009782 9.3e-131 471.1 418 62.0
CDE04G3405 Ceratophyllum demersum HOM05D007719 ORTHO05D009782 9.3e-123 444.5 408 61.0
GSVIVG01011772001 Vitis vinifera HOM05D007719 ORTHO05D009782 1.6e-122 443.7 313 72.8
Actinidia15254 Actinidia chinensis HOM05D007719 ORTHO05D009782 1.3e-121 440.7 391 60.6
Zm00001eb125300 Zea mays HOM05D007719 ORTHO05D009782 1.6e-111 407.1 401 54.1
SMO187G0003 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 2.3e-105 386.7 362 56.6
Thecc.02G280000 Theobroma cacao HOM05D007719 ORTHO05D009782 3.1e-102 376.3 257 73.9
Gohir.D12G153900 Gossypium hirsutum HOM05D007719 ORTHO05D009782 1.5e-101 374.0 250 74.4
Cpa.g.sc65.124 Carica papaya HOM05D007719 ORTHO05D009782 1.6e-98 364.0 250 72.0
Haze_11019 Corylus avellana HOM05D007719 ORTHO05D009782 4.8e-95 352.4 281 67.3
AagrBONN_evm.TU.Sc2ySwM_228.3777 Anthoceros agrestis HOM05D007719 ORTHO05D009782 1.5e-88 330.9 300 59.3
Cfa008596 Carpinus fangiana HOM05D007719 ORTHO05D009782 4.5e-85 319.3 201 78.1
SEGI_23314 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 8.2e-79 298.5 254 61.0
CBR_g12440 Chara braunii HOM05D007719 ORTHO05D009782 1.0e-76 291.6 366 45.6
Nn4g24120 Nelumbo nucifera HOM05D007719 ORTHO05D009782 1.1e-75 288.1 174 79.3
GSVIVG01011775001 Vitis vinifera HOM05D007719 ORTHO05D009782 1.6e-61 241.1 145 82.8
Duzib268G0649 Durio zibethinus HOM05D007719 ORTHO05D009782 7.7e-61 238.8 191 64.4
Cfa008597 Carpinus fangiana HOM05D007719 ORTHO05D009782 8.3e-47 192.2 129 69.0
Haze_11018 Corylus avellana HOM05D007719 ORTHO05D009782 5.4e-46 189.5 123 70.7
TPR.G29132 Trifolium pratense HOM05D007719 ORTHO05D009782 3.8e-07 60.5 73 49.3
PGR004G0179 Punica granatum HOM05D007226 ORTHO05D009160 9.3e-06 55.8 81 45.7


User provided reference genes

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