Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.07g203450 Amaranthus hybridus HOM05D013926 ORTHO05D000014 2.6e-65 251.9 128 100.0
Ah.02g119120 Amaranthus hybridus HOM05D000023 ORTHO05D002258 4.4e-28 128.3 94 69.1
AUR62040094 Chenopodium quinoa HOM05D000023 ORTHO05D000014 3.7e-19 98.6 94 55.3
AUR62042194 Chenopodium quinoa HOM05D000023 ORTHO05D000014 3.7e-19 98.6 93 55.9
HanXRQChr05g0139411 Helianthus annuus HOM05D000023 ORTHO05D000014 9.4e-15 84.0 93 49.5
TWI23G0203 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 3.6e-14 82.0 94 47.9
AUR62012060 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.1e-14 81.3 154 37.7
Hma1.2p1_0017F.1_g011150 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.5e-12 76.6 94 44.7
Lsat_1_v5_gn_5_118361 Lactuca sativa HOM05D000023 ORTHO05D000014 1.7e-11 73.2 94 43.6
Hma1.2p1_0084F.1_g042930 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 8.3e-11 70.9 95 41.1
Hma1.2p1_0153F.1_g067820 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.1e-10 70.5 94 41.5
Ah.07g197140 Amaranthus hybridus HOM05D000023 ORTHO05D000014 2.4e-10 69.3 94 37.2
EL10Ac2g03711 Beta vulgaris HOM05D000023 ORTHO05D000014 9.1e-10 67.4 93 41.9
Hma1.2p1_0801F.1_g220220 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 9.1e-10 67.4 85 42.4
Hund22389 Selenicereus undatus HOM05D000023 ORTHO05D000014 9.1e-10 67.4 94 45.7
Hma1.2p1_1425F.1_g282820 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.6e-09 66.6 68 45.6
RcHm_v2.0_Chr5g0011621 Rosa chinensis HOM05D013926 ORTHO05D020985 2.0e-09 66.2 89 43.8
Hma1.2p1_1125F.1_g259630 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 2.7e-09 65.9 92 39.1
ECA240G1446 Erigeron canadensis HOM05D001392 ORTHO05D003370 3.5e-09 65.5 94 36.2
Actinidia06841 Actinidia chinensis HOM05D000023 ORTHO05D000014 4.5e-09 65.1 93 38.7
Hma1.2p1_2537F.1_g324110 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 4.5e-09 65.1 83 42.2
Rhsim04G0118200 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.3e-08 63.5 96 36.5
ECA238G0901 Erigeron canadensis HOM05D000023 ORTHO05D000014 2.2e-08 62.8 143 34.3
RcHm_v2.0_Chr7g0223471 Rosa chinensis HOM05D000023 ORTHO05D002258 2.9e-08 62.4 57 52.6
CSS0003700 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 3.8e-08 62.0 90 35.6
Hma1.2p1_0222F.1_g093680 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 3.8e-08 62.0 95 37.9
CSS0029210 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.1e-07 60.5 96 34.4
Hma1.2p1_0169F.1_g074660 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.9e-07 59.7 62 45.2
Dinv14651 Davidia involucrata HOM05D019978 ORTHO05D018230 4.2e-07 58.5 67 44.8
Lsat_1_v5_gn_2_11620 Lactuca sativa HOM05D000023 ORTHO05D000014 3.6e-06 55.5 61 42.6


User provided reference genes

Program Settings