Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.07g202950 Amaranthus hybridus HOM05D008006 ORTHO05D010181 1.8e-165 585.9 295 100.0
EL10Ac6g14724 Beta vulgaris HOM05D008006 ORTHO05D010181 3.1e-114 415.6 289 71.3
AUR62016258 Chenopodium quinoa HOM05D008006 ORTHO05D010181 3.2e-98 362.5 261 69.7
Sc03g0006000 Simmondsia chinensis HOM05D008006 ORTHO05D010181 9.2e-82 307.8 282 55.7
MELO3C010256.2 Cucumis melo HOM05D008006 ORTHO05D010181 1.5e-79 300.4 282 58.5
TAR376G0197 Trochodendron aralioides HOM05D008006 ORTHO05D010181 1.5e-79 300.4 292 56.5
Cc07_g12390 Coffea canephora HOM05D008006 ORTHO05D010181 4.3e-79 298.9 302 53.6
DCAR_005377 Daucus carota HOM05D008006 ORTHO05D010181 4.3e-79 298.9 281 55.5
Lsat_1_v5_gn_8_113701 Lactuca sativa HOM05D008006 ORTHO05D010181 4.3e-79 298.9 283 55.8
PGR142G2664 Punica granatum HOM05D008006 ORTHO05D010181 7.3e-79 298.1 275 57.5
CDE07G0801 Ceratophyllum demersum HOM05D008006 ORTHO05D010181 1.2e-78 297.4 307 53.1
ClCG06G012090 Citrullus lanatus HOM05D008006 ORTHO05D010181 2.8e-78 296.2 279 57.7
CsaV3_1G028580 Cucumis sativus L. HOM05D008006 ORTHO05D010181 2.8e-78 296.2 295 56.6
Nitab4.5_0000973g0020 Nicotiana tabacum HOM05D008006 ORTHO05D010181 4.7e-78 295.4 284 55.3
CAN.G883.7 Capsicum annuum HOM05D008006 ORTHO05D010181 8.1e-78 294.7 276 57.2
Peaxi162Scf00981g00002 Petunia axillaris HOM05D008006 ORTHO05D010181 1.1e-77 294.3 281 55.9
PGSC0003DMG401009429 Solanum tuberosum HOM05D008006 ORTHO05D010181 2.4e-77 293.1 286 55.9
Sopen02g017480 Solanum pennellii HOM05D008006 ORTHO05D010181 5.3e-77 292.0 288 55.6
Aqoxy6G02620 Aquilegia oxysepala HOM05D008006 ORTHO05D010181 2.0e-76 290.0 299 55.2
Hma1.2p1_0085F.1_g044170 Hydrangea macrophylla HOM05D008006 ORTHO05D010181 2.0e-76 290.0 296 53.0
MBI04_g23901_MAGBIO Magnolia biondii HOM05D008006 ORTHO05D010181 3.4e-76 289.3 266 57.9
Nitab4.5_0000443g0190 Nicotiana tabacum HOM05D008006 ORTHO05D010181 3.4e-76 289.3 284 54.2
Prupe.7G252900 Prunus persica HOM05D008006 ORTHO05D010181 8.4e-75 284.6 280 54.3
RcHm_v2.0_Chr2g0086431 Rosa chinensis HOM05D008006 ORTHO05D010181 1.1e-74 284.3 288 56.6
Sabra18G0096000 Salix brachista HOM05D008006 ORTHO05D010181 3.2e-74 282.7 284 54.9
Sed0023235 Sechium edule HOM05D008006 ORTHO05D010181 4.2e-74 282.3 281 56.2
Potri.018G112900 Populus trichocarpa HOM05D008006 ORTHO05D010181 2.1e-73 280.0 289 53.3
MSTRG.3655 Avicennia marina HOM05D008006 ORTHO05D010181 6.0e-73 278.5 285 54.7
CANSAT11G1793 Cannabis sativa HOM05D008006 ORTHO05D010181 6.0e-73 278.5 272 55.5
Oeu023348.1 Olea europaea HOM05D008006 ORTHO05D010181 6.0e-73 278.5 285 53.0
Dinv19107 Davidia involucrata HOM05D008006 ORTHO05D007530 7.8e-73 278.1 274 54.4
Haze_19299 Corylus avellana HOM05D008006 ORTHO05D010181 2.3e-72 276.6 282 56.0
CiPaw.15G179000 Carya illinoinensis HOM05D008006 ORTHO05D010181 3.0e-72 276.2 286 55.2
MD15G1157700 Malus domestica HOM05D008006 ORTHO05D010181 3.9e-72 275.8 272 54.0
Medtr1g052525 Medicago truncatula HOM05D008006 ORTHO05D010181 1.1e-71 274.2 287 52.6
Duzib187G1563 Durio zibethinus HOM05D008006 ORTHO05D010181 2.5e-71 273.1 277 53.4
Migut.K01160 Erythranthe guttata HOM05D008006 ORTHO05D010181 5.6e-71 271.9 298 52.0
Manes.14G140100 Manihot esculenta HOM05D008006 ORTHO05D010181 5.6e-71 271.9 290 51.0
FAN28G2644 Fragaria x ananassa HOM05D008006 ORTHO05D010181 7.3e-71 271.6 283 55.1
Cfa020870 Carpinus fangiana HOM05D008006 ORTHO05D010181 1.3e-70 270.8 285 54.7
Phvul.009G208600 Phaseolus vulgaris HOM05D008006 ORTHO05D010181 4.8e-70 268.9 279 54.1
SGA_v2.0_scaffold229G43287 Striga asiatica HOM05D008006 ORTHO05D010181 4.8e-70 268.9 288 51.4
THA.LOC104827422 Tarenaya hassleriana HOM05D008006 ORTHO05D010181 8.1e-70 268.1 272 52.6
FvH4_1g01510 Fragaria vesca HOM05D008006 ORTHO05D010181 1.1e-69 267.7 283 54.4
COL.COLO4_22070 Corchorus olitorius HOM05D008006 ORTHO05D010181 5.3e-69 265.4 283 51.2
Gorai.010G110900 Gossypium raimondii HOM05D008006 ORTHO05D010181 9.0e-69 264.6 286 52.4
unitig_0.g2635 Utricularia gibba HOM05D008006 ORTHO05D010181 9.0e-69 264.6 281 49.8
VMungo1309G1328 Vigna mungo HOM05D008006 ORTHO05D010181 9.0e-69 264.6 283 52.3
Cpa.g.sc46.96 Carica papaya HOM05D008006 ORTHO05D010181 2.0e-68 263.5 283 49.8
Gohir.A06G096100 Gossypium hirsutum HOM05D008006 ORTHO05D010181 2.0e-68 263.5 286 52.1
FAN23G1450 Fragaria x ananassa HOM05D008006 ORTHO05D010181 9.9e-68 261.2 289 52.2
HPP92_022771 Vanilla planifolia HOM05D008006 ORTHO05D010181 1.3e-67 260.8 281 50.5
Thecc.09G037000 Theobroma cacao HOM05D008006 ORTHO05D010181 2.9e-67 259.6 283 50.5
Zm00001eb102080 Zea mays HOM05D008006 ORTHO05D010181 2.9e-67 259.6 275 52.4
QL02p091617 Quercus lobata HOM05D008006 ORTHO05D010181 1.9e-66 256.9 282 53.2
CSS0020571 Camellia sinensis var. sinensis HOM05D008006 ORTHO05D010181 3.5e-65 252.7 299 49.5
SEGI_07410 Sequoiadendron giganteum HOM05D008006 ORTHO05D010181 7.9e-65 251.5 281 49.1
SalBow5G3372 Salvia bowleyana HOM05D008006 ORTHO05D010181 3.3e-63 246.1 278 51.8
ATR0605G334 Amborella trichopoda HOM05D008006 ORTHO05D010181 4.0e-61 239.2 278 48.6
QL02p091673 Quercus lobata HOM05D008006 ORTHO05D010181 4.5e-60 235.7 273 51.3
AUR62003323 Chenopodium quinoa HOM05D002832 ORTHO05D007530 2.1e-57 226.9 133 75.9
Actinidia28771 Actinidia chinensis HOM05D008006 ORTHO05D010181 4.2e-50 202.6 197 54.3
HanXRQChr15g0486431 Helianthus annuus HOM05D008006 ORTHO05D010181 4.6e-49 199.1 161 57.1
Mapoly0054s0065 Marchantia polymorpha HOM05D008006 ORTHO05D010181 1.5e-47 194.1 271 42.4
Gohir.D06G096200 Gossypium hirsutum HOM05D008006 ORTHO05D010181 8.5e-43 178.3 227 47.1
Lalb_Chr11g0072821 Lupinus albus HOM05D008006 ORTHO05D010181 7.4e-39 165.2 117 69.2
SMO364G0826 Selaginella moellendorffii HOM05D008006 ORTHO05D010181 1.1e-34 151.4 229 43.7
AUR62043755 Chenopodium quinoa HOM05D008006 ORTHO05D010181 8.8e-32 141.7 80 80.0
CBR_g4365 Chara braunii HOM05D008006 ORTHO05D010181 1.0e-27 128.3 305 31.1
Solyc02g068350.1 Solanum lycopersicum HOM05D008006 ORTHO05D010181 2.0e-23 114.0 151 47.0
Cre16.g675000 Chlamydomonas reinhardtii HOM05D008006 ORTHO05D010181 1.8e-21 107.5 292 34.9
Hma1.2p1_2924F.1_g330380 Hydrangea macrophylla HOM05D008006 ORTHO05D010181 1.0e-11 75.1 58 55.2
FAN26G1902 Fragaria x ananassa HOM05D008006 ORTHO05D010181 8.0e-09 65.5 121 44.6


User provided reference genes

Program Settings