Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.07g202300 Amaranthus hybridus HOM05D006652 ORTHO05D008645 2.7e-114 415.2 197 100.0
Ah.08g222620 Amaranthus hybridus HOM05D006652 ORTHO05D008645 4.6e-29 132.1 92 78.3
AUR62038922 Chenopodium quinoa HOM05D006652 ORTHO05D008645 6.5e-23 111.7 93 68.8
AUR62038997 Chenopodium quinoa HOM05D006652 ORTHO05D008645 4.7e-21 105.5 110 60.0
EL10Ac9g20915 Beta vulgaris HOM05D006652 ORTHO05D008645 6.1e-21 105.1 93 66.7
Hund07829 Selenicereus undatus HOM05D006652 ORTHO05D008645 5.3e-17 92.0 93 54.8
Hma1.2p1_0166F.1_g073540 Hydrangea macrophylla HOM05D006652 ORTHO05D008645 2.9e-15 86.3 55 72.7
MELO3C019759.2 Cucumis melo HOM05D006652 ORTHO05D008645 1.5e-14 84.0 57 68.4
Dinv08786 Davidia involucrata HOM05D006652 ORTHO05D008645 1.9e-14 83.6 57 66.7
Atru.chr6.2810_Atru.chr6.2811 Acer truncatum HOM05D006652 ORTHO05D008645 2.5e-14 83.2 75 54.7
CsaV3_6G018460 Cucumis sativus L. HOM05D006652 ORTHO05D008645 2.5e-14 83.2 57 68.4
HanXRQChr17g0558041 Helianthus annuus HOM05D006652 ORTHO05D008645 2.5e-14 83.2 96 52.1
Potri.019G089700 Populus trichocarpa HOM05D006652 ORTHO05D008645 5.5e-14 82.0 56 69.6
ClCG02G017930 Citrullus lanatus HOM05D006652 ORTHO05D008645 9.4e-14 81.3 89 51.7
Ciclev10015734m.g Citrus clementina HOM05D006652 ORTHO05D008645 2.1e-13 80.1 93 52.7
GSVIVG01020686001 Vitis vinifera HOM05D006652 ORTHO05D008645 2.1e-13 80.1 63 58.7
MSTRG.14312 Avicennia marina HOM05D006652 ORTHO05D008645 2.7e-13 79.7 86 52.3
vmacro09218 Vaccinium macrocarpon HOM05D006652 ORTHO05D008645 3.6e-13 79.3 45 80.0
DCAR_013062 Daucus carota HOM05D006652 ORTHO05D008645 4.7e-13 79.0 57 66.7
Lsat_1_v5_gn_8_140221 Lactuca sativa HOM05D006652 ORTHO05D008645 4.7e-13 79.0 47 76.6
Nn1g04382 Nelumbo nucifera HOM05D006652 ORTHO05D008645 6.1e-13 78.6 56 64.3
Ca_18890_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 8.0e-13 78.2 84 47.6
Ca_18891_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 8.0e-13 78.2 84 47.6
Migut.H02157 Erythranthe guttata HOM05D006652 ORTHO05D008645 8.0e-13 78.2 44 79.5
Peaxi162Scf00241g00812 Petunia axillaris HOM05D006652 ORTHO05D008645 8.0e-13 78.2 73 52.1
Eucgr.K01102 Eucalyptus grandis HOM05D006652 ORTHO05D008645 1.0e-12 77.8 61 62.3
SalBow7G3656 Salvia bowleyana HOM05D006652 ORTHO05D008645 1.0e-12 77.8 72 56.9
SGA_v2.0_scaffold109G31132 Striga asiatica HOM05D006652 ORTHO05D008645 1.0e-12 77.8 44 79.5
CAN.G782.5 Capsicum annuum HOM05D006652 ORTHO05D008645 1.4e-12 77.4 54 66.7
Psat7g166280 Pisum sativum HOM05D006652 ORTHO05D008645 1.4e-12 77.4 84 47.6
Sabra19G0100100 Salix brachista HOM05D006652 ORTHO05D008645 1.4e-12 77.4 56 64.3
Sabra19G0103300 Salix brachista HOM05D006652 ORTHO05D008645 1.4e-12 77.4 56 64.3
Glyma.12G122700 Glycine max HOM05D006652 ORTHO05D008645 1.8e-12 77.0 78 50.0
Lj8C103T10 Lonicera japonica HOM05D006652 ORTHO05D008645 1.8e-12 77.0 59 62.7
TPR.G21861 Trifolium pratense HOM05D006652 ORTHO05D008645 1.8e-12 77.0 90 46.7
Glyma.06G283400 Glycine max HOM05D006652 ORTHO05D008645 2.3e-12 76.6 54 70.4
Aqoxy4G00418 Aquilegia oxysepala HOM05D006652 ORTHO05D008645 3.0e-12 76.3 57 59.6
TAR629G0548 Trochodendron aralioides HOM05D006652 ORTHO05D008645 3.9e-12 75.9 52 63.5
TWI59G0297 Tripterygium wilfordii HOM05D006652 ORTHO05D008645 5.2e-12 75.5 57 59.6
VMungo1127G0176 Vigna mungo HOM05D006652 ORTHO05D008645 5.2e-12 75.5 44 77.3
unitig_21.g20276 Utricularia gibba HOM05D006652 ORTHO05D008645 6.7e-12 75.1 53 67.9
CSS0047332 Camellia sinensis var. sinensis HOM05D006652 ORTHO05D008645 8.8e-12 74.7 59 62.7
ECA234G1589 Erigeron canadensis HOM05D006652 ORTHO05D008645 8.8e-12 74.7 45 75.6
Manes.13G137800 Manihot esculenta HOM05D006652 ORTHO05D008645 8.8e-12 74.7 45 77.8
Nitab4.5_0000822g0100 Nicotiana tabacum HOM05D006652 ORTHO05D008645 8.8e-12 74.7 95 44.2
Phvul.011G134400 Phaseolus vulgaris HOM05D006652 ORTHO05D008645 8.8e-12 74.7 44 77.3
Ca_18889_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 1.1e-11 74.3 84 46.4
Cc05_g08160 Coffea canephora HOM05D006652 ORTHO05D008645 1.1e-11 74.3 63 57.1
Glyma.06G283600 Glycine max HOM05D006652 ORTHO05D008645 1.5e-11 73.9 44 77.3
Nitab4.5_0008146g0020 Nicotiana tabacum HOM05D006652 ORTHO05D008645 2.0e-11 73.6 95 43.2
Cc05_g08190 Coffea canephora HOM05D006652 ORTHO05D008645 2.6e-11 73.2 108 43.5
Medtr4g079750 Medicago truncatula HOM05D006652 ORTHO05D008645 2.6e-11 73.2 45 73.3
Cc00_g35820 Coffea canephora HOM05D006652 ORTHO05D008645 3.3e-11 72.8 96 42.7
ATR0661G163 Amborella trichopoda HOM05D006652 ORTHO05D008645 4.4e-11 72.4 73 47.9
PGR142G2816 Punica granatum HOM05D006652 ORTHO05D008645 4.4e-11 72.4 57 54.4
Solyc10g008020.3 Solanum lycopersicum HOM05D006652 ORTHO05D008645 5.7e-11 72.0 46 67.4
Thecc.01G148700 Theobroma cacao HOM05D006652 ORTHO05D008645 5.7e-11 72.0 44 72.7
Lj3g0009013 Lotus japonicus HOM05D006652 ORTHO05D008645 9.7e-11 71.2 56 66.1
arahy.Tifrunner.gnm1.ann1.5ZDL5Q Arachis hypogaea HOM05D006652 ORTHO05D008645 1.3e-10 70.9 101 41.6
Sopen10g003890 Solanum pennellii HOM05D006652 ORTHO05D008645 1.3e-10 70.9 46 67.4
EL10Ac7g17807 Beta vulgaris HOM05D012126 ORTHO05D021189 1.7e-10 70.5 69 44.9
CiPaw.03G187000 Carya illinoinensis HOM05D006652 ORTHO05D008645 1.7e-10 70.5 46 65.2
arahy.Tifrunner.gnm1.ann1.KP1SVS Arachis hypogaea HOM05D006652 ORTHO05D008645 2.2e-10 70.1 101 41.6
PGSC0003DMG400010544 Solanum tuberosum HOM05D006652 ORTHO05D008645 3.7e-10 69.3 42 69.0
Lalb_Chr19g0134921 Lupinus albus HOM05D006652 ORTHO05D008645 6.3e-10 68.6 51 64.7
QL08p041412 Quercus lobata HOM05D006652 ORTHO05D008645 8.2e-10 68.2 93 46.2
Duzib187G0644 Durio zibethinus HOM05D006652 ORTHO05D008645 1.4e-09 67.4 44 68.2
Os10g0181600 Oryza sativa ssp. japonica HOM05D006652 ORTHO05D008645 9.1e-09 64.7 56 53.6
Gohir.A10G153800 Gossypium hirsutum HOM05D006652 ORTHO05D008645 1.2e-08 64.3 53 58.5
Gohir.D10G112300 Gossypium hirsutum HOM05D006652 ORTHO05D008645 1.2e-08 64.3 53 58.5
Gorai.011G124200 Gossypium raimondii HOM05D006652 ORTHO05D008645 1.2e-08 64.3 53 58.5
COL.COLO4_33547 Corchorus olitorius HOM05D006652 ORTHO05D008645 2.6e-08 63.2 78 44.9
Zm00001eb223890 Zea mays HOM05D006652 ORTHO05D008645 5.9e-08 62.0 42 64.3
Ah.06g185220 Amaranthus hybridus HOM05D012126 ORTHO05D021189 2.9e-07 59.7 72 41.7
EL10Ac7g15819 Beta vulgaris HOM05D012126 ORTHO05D090088 8.5e-07 58.2 65 40.0
Zm00001eb202810 Zea mays HOM05D006652 ORTHO05D008645 8.5e-07 58.2 46 56.5
AUR62031331 Chenopodium quinoa HOM05D012126 ORTHO05D039048 1.1e-06 57.8 69 42.0


User provided reference genes

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