Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.07g202050 Amaranthus hybridus HOM05D006345 ORTHO05D007428 5.8e-141 504.2 254 100.0
EL10Ac3g05939 Beta vulgaris HOM05D006345 ORTHO05D007428 4.6e-122 441.4 252 85.7
AUR62015383 Chenopodium quinoa HOM05D006345 ORTHO05D007428 2.1e-111 406.0 254 78.7
Ah.15g099610 Amaranthus hybridus HOM05D006345 ORTHO05D007428 2.0e-109 399.4 254 77.2
Sc05g0003040 Simmondsia chinensis HOM05D006345 ORTHO05D007428 1.8e-97 359.8 258 68.6
Psat7g230920 Pisum sativum HOM05D006345 ORTHO05D007428 5.7e-96 354.8 250 68.0
MBI16_g30839_MAGBIO Magnolia biondii HOM05D006345 ORTHO05D007428 2.8e-95 352.4 242 69.8
Rhsim13G0136400 Rhododendron simsii HOM05D006345 ORTHO05D007428 3.7e-95 352.1 257 68.1
Nn3g17198 Nelumbo nucifera HOM05D006345 ORTHO05D007428 8.2e-95 350.9 256 69.1
Dinv19690 Davidia involucrata HOM05D006345 ORTHO05D007428 1.8e-94 349.7 259 68.3
TAR624G0710 Trochodendron aralioides HOM05D006345 ORTHO05D007428 6.9e-94 347.8 253 68.4
QL08p052794 Quercus lobata HOM05D006345 ORTHO05D007428 3.4e-93 345.5 257 67.3
AUR62002307 Chenopodium quinoa HOM05D006345 ORTHO05D007428 4.5e-93 345.1 254 69.7
TPR.G7580 Trifolium pratense HOM05D006345 ORTHO05D007428 7.7e-93 344.4 250 68.8
CSS0008102 Camellia sinensis var. sinensis HOM05D006345 ORTHO05D007428 1.3e-92 343.6 249 68.3
Glyma.03G027700 Glycine max HOM05D006345 ORTHO05D007428 1.7e-92 343.2 250 68.0
CANSAT11G1250 Cannabis sativa HOM05D006345 ORTHO05D007428 2.9e-92 342.4 217 74.7
Migut.D00572 Erythranthe guttata HOM05D006345 ORTHO05D007428 3.8e-92 342.0 246 69.5
Aqoxy3G02382 Aquilegia oxysepala HOM05D006345 ORTHO05D007428 5.0e-92 341.7 224 74.1
PSO675G7514 Papaver somniferum HOM05D006345 ORTHO05D007428 6.5e-92 341.3 264 66.3
Lj3g0013440 Lotus japonicus HOM05D006345 ORTHO05D007428 8.5e-92 340.9 251 66.1
Duzib212G0272 Durio zibethinus HOM05D006345 ORTHO05D007428 1.1e-91 340.5 249 66.7
Sed0017834 Sechium edule HOM05D006345 ORTHO05D007428 4.2e-91 338.6 255 67.8
Aqoxy7G02153 Aquilegia oxysepala HOM05D006345 ORTHO05D007428 5.5e-91 338.2 240 67.9
Lalb_Chr07g0189941 Lupinus albus HOM05D006345 ORTHO05D007428 5.5e-91 338.2 249 67.1
Medtr4g024860 Medicago truncatula HOM05D000001 ORTHO05D000003 5.5e-91 338.2 251 66.5
Ca_19950_v3 Cicer arietinum L. HOM05D006345 ORTHO05D007428 1.2e-90 337.0 251 66.5
Phvul.003G037201 Phaseolus vulgaris HOM05D006345 ORTHO05D007428 1.2e-90 337.0 250 66.0
Sed0021159 Sechium edule HOM05D006345 ORTHO05D007428 1.2e-90 337.0 255 66.7
arahy.Tifrunner.gnm1.ann1.S1VR06 Arachis hypogaea HOM05D006345 ORTHO05D007428 1.6e-90 336.7 217 74.2
Glyma.01G139633 Glycine max HOM05D006345 ORTHO05D007428 1.6e-90 336.7 249 67.1
DCAR_001254 Daucus carota HOM05D006345 ORTHO05D007428 2.7e-90 335.9 250 66.8
Thecc.04G283900 Theobroma cacao HOM05D006345 ORTHO05D007428 2.7e-90 335.9 257 65.4
arahy.Tifrunner.gnm1.ann1.P3RVZQ Arachis hypogaea HOM05D006345 ORTHO05D007428 4.7e-90 335.1 217 74.7
arahy.Tifrunner.gnm1.ann1.G9BQRV Arachis hypogaea HOM05D006345 ORTHO05D007428 7.9e-90 334.3 217 74.2
arahy.Tifrunner.gnm1.ann1.W97VC3 Arachis hypogaea HOM05D006345 ORTHO05D007428 7.9e-90 334.3 217 73.7
MD05G1242200 Malus domestica HOM05D006345 ORTHO05D007428 1.4e-89 333.6 256 66.4
PGSC0003DMG400023836 Solanum tuberosum HOM05D006345 ORTHO05D007428 1.4e-89 333.6 223 70.9
CiPaw.01G263700 Carya illinoinensis HOM05D006345 ORTHO05D007428 1.8e-89 333.2 220 71.8
Cc09_g04580 Coffea canephora HOM05D006345 ORTHO05D007428 2.3e-89 332.8 245 65.7
Nitab4.5_0001925g0110 Nicotiana tabacum HOM05D006345 ORTHO05D007428 3.0e-89 332.4 222 71.2
Nitab4.5_0008647g0020 Nicotiana tabacum HOM05D006345 ORTHO05D007428 3.0e-89 332.4 222 71.6
ClCG02G007550 Citrullus lanatus HOM05D006345 ORTHO05D007428 3.9e-89 332.0 255 66.3
RcHm_v2.0_Chr5g0022101 Rosa chinensis HOM05D006345 ORTHO05D007428 3.9e-89 332.0 258 64.3
Gohir.A10G163600 Gossypium hirsutum HOM05D006345 ORTHO05D007428 5.1e-89 331.6 249 65.9
Gorai.011G189500 Gossypium raimondii HOM05D006345 ORTHO05D007428 6.7e-89 331.3 249 65.9
Cpa.g.sc12.137 Carica papaya HOM05D006345 ORTHO05D007428 8.8e-89 330.9 251 66.9
Cc06_g02140 Coffea canephora HOM05D006345 ORTHO05D007428 8.8e-89 330.9 245 65.7
PSO541G0968 Papaver somniferum HOM05D006345 ORTHO05D007428 8.8e-89 330.9 264 65.5
Sabra01G0052000 Salix brachista HOM05D006345 ORTHO05D007428 8.8e-89 330.9 250 67.2
MELO3C018575.2 Cucumis melo HOM05D006345 ORTHO05D007428 1.1e-88 330.5 255 65.5
TWI53G2073 Tripterygium wilfordii HOM05D006345 ORTHO05D007428 1.1e-88 330.5 257 65.8
ECA238G2485 Erigeron canadensis HOM05D006345 ORTHO05D007428 1.5e-88 330.1 250 66.0
CsaV3_7G007230 Cucumis sativus L. HOM05D006345 ORTHO05D007428 2.0e-88 329.7 255 65.9
Prupe.4G121300 Prunus persica HOM05D006345 ORTHO05D007428 2.0e-88 329.7 253 65.2
Ciclev10016345m.g Citrus clementina HOM05D006345 ORTHO05D007428 2.6e-88 329.3 258 62.8
FvH4_3g13390 Fragaria vesca HOM05D006345 ORTHO05D007428 2.6e-88 329.3 258 63.6
FAN21G0075 Fragaria x ananassa HOM05D006345 ORTHO05D007428 3.3e-88 328.9 258 63.6
PSO782G3410 Papaver somniferum HOM05D006345 ORTHO05D007428 3.3e-88 328.9 235 71.1
Peaxi162Scf00062g10131 Petunia axillaris HOM05D006345 ORTHO05D007428 3.3e-88 328.9 223 70.0
Manes.16G061100 Manihot esculenta HOM05D006345 ORTHO05D007428 4.4e-88 328.6 256 63.3
Potri.001G073700 Populus trichocarpa HOM05D006345 ORTHO05D007428 4.4e-88 328.6 257 65.0
CAN.G575.62 Capsicum annuum HOM05D006345 ORTHO05D007428 5.7e-88 328.2 223 69.1
COL.COLO4_13882 Corchorus olitorius HOM05D006345 ORTHO05D007428 7.4e-88 327.8 255 64.3
VMungo1383G2204 Vigna mungo HOM05D006345 ORTHO05D007428 7.4e-88 327.8 250 65.2
FAN11G3812 Fragaria x ananassa HOM05D006345 ORTHO05D007428 1.7e-87 326.6 258 63.2
MSTRG.21400 Avicennia marina HOM05D006345 ORTHO05D007428 2.2e-87 326.2 246 66.3
FAN25G2350 Fragaria x ananassa HOM05D006345 ORTHO05D007428 2.8e-87 325.9 258 63.6
THA.LOC104822694 Tarenaya hassleriana HOM05D006345 ORTHO05D007428 2.8e-87 325.9 249 65.9
Lalb_Chr13g0291791 Lupinus albus HOM05D006345 ORTHO05D007428 6.3e-87 324.7 251 65.7
PGR042G3945 Punica granatum HOM05D006345 ORTHO05D007428 8.2e-87 324.3 250 64.8
Gohir.D10G170000 Gossypium hirsutum HOM05D006345 ORTHO05D007428 1.1e-86 323.9 249 63.9
SalBow7G0027 Salvia bowleyana HOM05D006345 ORTHO05D007428 1.4e-86 323.6 252 64.3
FAN16G3736 Fragaria x ananassa HOM05D006345 ORTHO05D007428 1.8e-86 323.2 258 63.2
Sopen12g034690 Solanum pennellii HOM05D006345 ORTHO05D007428 1.8e-86 323.2 223 68.6
HanXRQChr14g0447431 Helianthus annuus HOM05D006345 ORTHO05D007428 3.1e-86 322.4 249 64.3
SGA_v2.0_scaffold8G04616 Striga asiatica HOM05D006345 ORTHO05D007428 1.2e-85 320.5 255 64.3
Eucgr.F03783 Eucalyptus grandis HOM05D006345 ORTHO05D007428 1.6e-85 320.1 249 63.9
CiPaw.14G048700 Carya illinoinensis HOM05D006345 ORTHO05D007428 2.0e-85 319.7 212 70.8
Lsat_1_v5_gn_3_103240 Lactuca sativa HOM05D006345 ORTHO05D007428 3.5e-85 318.9 232 68.1
HPP92_018755 Vanilla planifolia HOM05D006345 ORTHO05D007428 4.5e-85 318.5 252 61.9
SalBow2G1193 Salvia bowleyana HOM05D006345 ORTHO05D007428 7.7e-85 317.8 224 68.3
Oeu017184.1 Olea europaea HOM05D006345 ORTHO05D007428 1.0e-84 317.4 223 68.2
unitig_52.g17581 Utricularia gibba HOM05D006345 ORTHO05D007428 2.2e-84 316.2 254 61.8
Oeu012935.1 Olea europaea HOM05D006345 ORTHO05D007428 8.5e-84 314.3 222 66.7
ATR0561G247 Amborella trichopoda HOM05D006345 ORTHO05D007428 1.5e-83 313.5 235 63.4
Aa31LG8G650 Aethionema arabicum HOM05D006345 ORTHO05D007428 5.5e-83 311.6 249 63.1
AL3G25340 Arabidopsis lyrata HOM05D006345 ORTHO05D007428 2.7e-82 309.3 241 63.9
CARHR088090 Cardamine hirsuta HOM05D006345 ORTHO05D007428 4.7e-82 308.5 241 63.9
Thhalv10021414m.g Eutrema salsugineum HOM05D006345 ORTHO05D007428 6.1e-82 308.1 219 67.1
AT3G13440 Arabidopsis thaliana HOM05D006345 ORTHO05D007428 8.0e-82 307.8 241 63.5
BcaC09g48312 Brassica carinata HOM05D006345 ORTHO05D007428 5.2e-81 305.1 246 63.0
C01p51620 Brassica napus HOM05D006345 ORTHO05D007428 5.2e-81 305.1 246 63.0
BolC1t05105H Brassica oleracea HOM05D006345 ORTHO05D007428 5.2e-81 305.1 246 63.0
BcaB04g21015 Brassica carinata HOM05D006345 ORTHO05D007428 6.7e-81 304.7 246 62.6
CDE04G1044 Ceratophyllum demersum HOM05D006345 ORTHO05D007428 8.8e-81 304.3 241 64.3
Carub.0006s3398 Capsella rubella HOM05D006345 ORTHO05D007428 2.0e-80 303.1 241 62.7
BraA05t22416Z Brassica rapa HOM05D002140 ORTHO05D007428 7.5e-80 301.2 245 62.0
Carub.0003s1288 Capsella rubella HOM05D006345 ORTHO05D007428 9.7e-80 300.8 217 67.7
CDE06G0136 Ceratophyllum demersum HOM05D006345 ORTHO05D007428 9.7e-80 300.8 212 68.4
Sp3g11640 Schrenkiella parvula HOM05D006345 ORTHO05D007428 1.3e-79 300.4 241 62.7
A01p40130 Brassica napus HOM05D006345 ORTHO05D007428 1.7e-79 300.1 246 62.6
BcaC05g29179 Brassica carinata HOM05D002140 ORTHO05D007428 2.2e-79 299.7 245 61.6
C05p54470 Brassica napus HOM05D002140 ORTHO05D007428 2.2e-79 299.7 245 61.6
BolC5t34114H Brassica oleracea HOM05D002140 ORTHO05D007428 2.2e-79 299.7 245 61.6
A05p36090 Brassica napus HOM05D002140 ORTHO05D007428 2.8e-79 299.3 245 61.6
BraA01t04054Z Brassica rapa HOM05D006345 ORTHO05D007428 2.8e-79 299.3 246 62.2
Mapoly0069s0066 Marchantia polymorpha HOM05D006345 ORTHO05D007428 8.2e-79 297.7 241 59.3
Os03g0824200 Oryza sativa ssp. japonica HOM05D006345 ORTHO05D007428 4.1e-78 295.4 239 61.9
SHI16738 Sapria himalayana HOM05D006345 ORTHO05D007428 9.1e-78 294.3 215 67.9
Lsat_1_v5_gn_2_63801 Lactuca sativa HOM05D006345 ORTHO05D007428 2.9e-76 289.3 250 59.2
Zm00001eb211470 Zea mays HOM05D006345 ORTHO05D007428 5.5e-75 285.0 239 60.7
Pp3c9_17440 Physcomitrium patens HOM05D006345 ORTHO05D007428 1.2e-74 283.9 242 55.8
AagrBONN_evm.TU.Sc2ySwM_117.4015 Anthoceros agrestis HOM05D006345 ORTHO05D007428 2.4e-70 269.6 242 53.3
SMO358G0200 Selaginella moellendorffii HOM05D006345 ORTHO05D007428 2.4e-70 269.6 211 62.6
Solyc12g100070.3 Solanum lycopersicum HOM05D006345 ORTHO05D007428 1.3e-68 263.8 185 67.0
CBR_g45447 Chara braunii HOM05D006345 ORTHO05D007428 1.7e-68 263.5 240 54.6
Thhalv10009961m.g Eutrema salsugineum HOM05D006345 ORTHO05D007428 7.5e-64 248.1 219 57.5
Zm00001eb187530 Zea mays HOM05D006345 ORTHO05D007428 8.6e-60 234.6 186 61.3
SEGI_21458 Sequoiadendron giganteum HOM05D006345 ORTHO05D007428 6.1e-58 228.4 164 68.3
CAN.G1126.44 Capsicum annuum HOM05D006345 ORTHO05D007428 5.0e-44 182.2 187 51.3
Cre01.g036750 Chlamydomonas reinhardtii HOM05D006345 ORTHO05D007428 7.3e-43 178.3 213 44.1
Zm00001eb141630 Zea mays HOM05D006345 ORTHO05D007428 1.2e-40 171.0 145 58.6
CSS0000171 Camellia sinensis var. sinensis HOM05D006345 ORTHO05D007428 9.8e-40 167.9 139 61.2
Potri.003G157201 Populus trichocarpa HOM05D006345 ORTHO05D007428 8.1e-34 148.3 114 63.2
MCO02G297 Micromonas commoda HOM05D006345 ORTHO05D007428 1.3e-31 141.0 167 44.9
Sabra03G0114100 Salix brachista HOM05D000029 ORTHO05D000854 1.1e-27 127.9 194 39.2
Zm00001eb356470 Zea mays HOM05D006345 ORTHO05D007428 2.1e-26 123.6 98 62.2
ATR0006G036 Amborella trichopoda HOM05D006345 ORTHO05D007428 3.0e-12 76.6 49 65.3
Lj1P1152T38 Lonicera japonica HOM05D006345 ORTHO05D007428 3.4e-08 63.2 46 58.7


User provided reference genes

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