Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.07g197340 Amaranthus hybridus HOM05D007666 ORTHO05D009567 4.4e-212 741.1 398 100.0
EL10Ac5g12908 Beta vulgaris HOM05D007666 ORTHO05D009567 7.0e-125 451.4 399 65.2
AUR62010832 Chenopodium quinoa HOM05D007666 ORTHO05D009567 1.7e-107 393.7 401 59.4
Hund14226 Selenicereus undatus HOM05D007666 ORTHO05D009567 1.7e-86 323.9 427 47.5
AUR62019830 Chenopodium quinoa HOM05D007666 ORTHO05D009567 1.6e-84 317.4 400 52.5
Dinv38838 Davidia involucrata HOM05D007666 ORTHO05D009567 9.6e-58 228.4 363 39.7
CSS0011760 Camellia sinensis var. sinensis HOM05D007666 ORTHO05D009567 5.8e-55 219.2 386 37.0
Rhsim02G0242700 Rhododendron simsii HOM05D007666 ORTHO05D009567 5.8e-55 219.2 375 42.9
GSVIVG01019521001 Vitis vinifera HOM05D007666 ORTHO05D009567 1.4e-53 214.5 398 39.2
Potri.001G092300 Populus trichocarpa HOM05D007666 ORTHO05D009567 2.7e-52 210.3 224 50.0
Thecc.03G296800 Theobroma cacao HOM05D007666 ORTHO05D009567 4.6e-52 209.5 253 44.3
Prupe.5G117900 Prunus persica HOM05D007666 ORTHO05D009567 1.9e-50 204.1 395 39.0
Actinidia22150 Actinidia chinensis HOM05D007666 ORTHO05D009567 2.5e-50 203.8 252 47.6
Potri.003G139400 Populus trichocarpa HOM05D007666 ORTHO05D009567 4.8e-49 199.5 230 45.7
QL02p030815 Quercus lobata HOM05D007666 ORTHO05D009567 1.4e-48 198.0 241 46.1
Cpa.g.sc79.41 Carica papaya HOM05D007666 ORTHO05D009567 5.3e-48 196.1 388 37.9
Gorai.003G080900 Gossypium raimondii HOM05D007666 ORTHO05D009567 9.0e-48 195.3 231 45.0
Aqoxy5G04207 Aquilegia oxysepala HOM05D007666 ORTHO05D009567 1.2e-47 194.9 353 37.7
Duzib068G1371 Durio zibethinus HOM05D007666 ORTHO05D009567 2.0e-47 194.1 282 39.7
MELO3C016286.2 Cucumis melo HOM05D007666 ORTHO05D009567 2.6e-47 193.7 223 47.5
MD06G1105600 Malus domestica HOM05D007666 ORTHO05D009567 2.6e-47 193.7 397 38.0
Sabra03G0100600 Salix brachista HOM05D007666 ORTHO05D009567 1.7e-46 191.0 300 42.3
CiPaw.12G083800 Carya illinoinensis HOM05D007666 ORTHO05D009567 3.8e-46 189.9 353 36.8
Hma1.2p1_0229F.1_g097150 Hydrangea macrophylla HOM05D007666 ORTHO05D009567 5.0e-46 189.5 331 39.9
Gohir.D03G082600 Gossypium hirsutum HOM05D007666 ORTHO05D009567 6.5e-46 189.1 260 42.7
PSO135G0060 Papaver somniferum HOM05D007666 ORTHO05D009567 1.1e-45 188.3 325 37.8
CsaV3_4G006520 Cucumis sativus L. HOM05D007666 ORTHO05D009567 2.5e-45 187.2 223 46.2
TAR636G3598 Trochodendron aralioides HOM05D007666 ORTHO05D009567 1.6e-44 184.5 231 44.2
Sed0007649 Sechium edule HOM05D007666 ORTHO05D009567 1.0e-43 181.8 225 48.0
PSO384G2287 Papaver somniferum HOM05D007666 ORTHO05D009567 1.8e-43 181.0 383 35.8
Manes.01G049375 Manihot esculenta HOM05D007666 ORTHO05D009567 3.9e-43 179.9 283 39.2
TWI60G1340 Tripterygium wilfordii HOM05D007666 ORTHO05D009567 6.7e-43 179.1 340 40.6
Ciclev10020669m.g Citrus clementina HOM05D007666 ORTHO05D009567 1.5e-42 177.9 386 37.0
ClCG07G014990 Citrullus lanatus HOM05D007666 ORTHO05D009567 5.7e-42 176.0 401 35.4
HanXRQChr06g0166511 Helianthus annuus HOM05D007666 ORTHO05D009567 2.2e-41 174.1 396 33.1
Atru.chr9.2008 Acer truncatum HOM05D007666 ORTHO05D009567 2.8e-41 173.7 403 34.7
FvH4_5g04480 Fragaria vesca HOM05D007666 ORTHO05D009567 3.7e-41 173.3 346 38.7
FAN18G2245 Fragaria x ananassa HOM05D007666 ORTHO05D009567 3.7e-41 173.3 346 38.7
FAN13G3316 Fragaria x ananassa HOM05D007666 ORTHO05D009567 4.8e-41 172.9 346 38.7
FAN18G0717 Fragaria x ananassa HOM05D007666 ORTHO05D009567 1.4e-40 171.4 346 38.4
RcHm_v2.0_Chr7g0195021 Rosa chinensis HOM05D007666 ORTHO05D009567 1.8e-40 171.0 288 41.3
Gohir.A02G101700 Gossypium hirsutum HOM05D007666 ORTHO05D009567 2.4e-40 170.6 275 38.9
vmacro11431 Vaccinium macrocarpon HOM05D007666 ORTHO05D009567 4.1e-40 169.9 362 34.3
Peaxi162Scf00074g00106 Petunia axillaris HOM05D007666 ORTHO05D009567 1.2e-39 168.3 241 41.9
CARHR046550 Cardamine hirsuta HOM05D007666 ORTHO05D009567 4.5e-39 166.4 333 38.7
Nitab4.5_0001231g0060 Nicotiana tabacum HOM05D007666 ORTHO05D009567 1.3e-38 164.9 240 41.2
FAN08G0521 Fragaria x ananassa HOM05D007666 ORTHO05D009567 5.0e-38 162.9 348 37.6
CiPaw.11G122000 Carya illinoinensis HOM05D007666 ORTHO05D009567 6.5e-38 162.5 294 40.1
AL2G10470 Arabidopsis lyrata HOM05D007666 ORTHO05D009567 1.9e-37 161.0 338 39.1
Gorai.006G207700 Gossypium raimondii HOM05D007666 ORTHO05D009567 1.9e-37 161.0 226 38.5
Sed0008321 Sechium edule HOM05D007666 ORTHO05D009567 2.5e-37 160.6 348 35.3
DCAR_005041 Daucus carota HOM05D007666 ORTHO05D009567 3.2e-37 160.2 202 44.6
Gohir.A09G190500 Gossypium hirsutum HOM05D007666 ORTHO05D009567 5.5e-37 159.5 260 36.5
THA.LOC104817649 Tarenaya hassleriana HOM05D007666 ORTHO05D009567 7.2e-37 159.1 421 35.6
Sopen08g030510 Solanum pennellii HOM05D007666 ORTHO05D009567 1.2e-36 158.3 243 38.7
Gohir.D09G185200 Gossypium hirsutum HOM05D007666 ORTHO05D009567 2.7e-36 157.1 226 38.1
MBI07_g38452_MAGBIO Magnolia biondii HOM05D007666 ORTHO05D009567 3.6e-36 156.8 352 36.6
AT1G64385 Arabidopsis thaliana HOM05D007666 ORTHO05D009567 6.1e-36 156.0 335 38.5
Thhalv10023582m.g Eutrema salsugineum HOM05D007666 ORTHO05D009567 3.9e-35 153.3 281 39.1
Carub.0002s0039 Capsella rubella HOM05D007666 ORTHO05D009567 6.7e-35 152.5 336 36.3
MSTRG.25667 Avicennia marina HOM05D007666 ORTHO05D009567 2.5e-34 150.6 299 36.1
SGA_v2.0_scaffold305G47963 Striga asiatica HOM05D007666 ORTHO05D009567 5.7e-34 149.4 291 38.1
Migut.A00661 Erythranthe guttata HOM05D007666 ORTHO05D009567 2.2e-33 147.5 320 34.1
ATR0188G013 Amborella trichopoda HOM05D007666 ORTHO05D009567 6.3e-33 146.0 404 33.7
Nitab4.5_0005537g0030 Nicotiana tabacum HOM05D007666 ORTHO05D009567 8.2e-33 145.6 385 31.7
C09p17230 Brassica napus HOM05D007666 ORTHO05D009567 5.3e-32 142.9 242 43.0
BolC9t54623H Brassica oleracea HOM05D007666 ORTHO05D009567 5.3e-32 142.9 242 43.0
BcaC04g22624 Brassica carinata HOM05D007666 ORTHO05D009567 6.9e-32 142.5 242 41.7
PGSC0003DMG400012289 Solanum tuberosum HOM05D007666 ORTHO05D009567 1.2e-31 141.7 394 32.0
A09p14330 Brassica napus HOM05D007666 ORTHO05D009567 4.5e-31 139.8 276 38.8
SpUn0393_0010 Schrenkiella parvula HOM05D007666 ORTHO05D009567 4.5e-31 139.8 337 36.2
Duzib205G0056 Durio zibethinus HOM05D007666 ORTHO05D009567 5.9e-31 139.4 225 38.7
Lj2C168T16 Lonicera japonica HOM05D007666 ORTHO05D009567 1.0e-30 138.7 207 40.6
COL.COLO4_10690 Corchorus olitorius HOM05D007666 ORTHO05D009567 1.7e-30 137.9 294 36.4
Lsat_1_v5_gn_3_10540 Lactuca sativa HOM05D007666 ORTHO05D009567 3.8e-30 136.7 340 32.6
ECA246G0366 Erigeron canadensis HOM05D007666 ORTHO05D009567 6.5e-30 136.0 358 30.7
Cc08_g15990 Coffea canephora HOM05D007666 ORTHO05D009567 1.1e-29 135.2 407 30.2
BcaB07g31505 Brassica carinata HOM05D007666 ORTHO05D009567 1.0e-27 128.6 328 36.6
BraA09t37080Z Brassica rapa HOM05D007666 ORTHO05D009567 1.0e-27 128.6 325 36.3
Dinv37538 Davidia involucrata HOM05D007666 ORTHO05D009567 2.0e-26 124.4 265 36.6
Aa31LG2G1390 Aethionema arabicum HOM05D007666 ORTHO05D009567 2.6e-26 124.0 286 35.3
MD14G1127900 Malus domestica HOM05D007666 ORTHO05D009567 3.3e-26 123.6 183 41.5
HPP92_005518 Vanilla planifolia HOM05D007666 ORTHO05D009567 4.4e-26 123.2 305 32.8
SalBow1G7426 Salvia bowleyana HOM05D007666 ORTHO05D009567 4.8e-25 119.8 292 34.2
Actinidia04207 Actinidia chinensis HOM05D007666 ORTHO05D009567 2.0e-23 114.4 253 37.5
Zm00001eb344230 Zea mays HOM05D007666 ORTHO05D009567 7.7e-23 112.5 269 36.1
Nn3g19029 Nelumbo nucifera HOM05D007666 ORTHO05D009567 5.0e-22 109.8 156 38.5
Atru.chr2.3612 Acer truncatum HOM05D007666 ORTHO05D009567 8.8e-19 99.0 148 35.1
Aqoxy4G02429 Aquilegia oxysepala HOM05D003589 ORTHO05D005170 1.4e-16 91.7 229 30.1
Ciclev10011425m.g Citrus clementina HOM05D003589 ORTHO05D005170 1.4e-16 91.7 220 31.8
Atru.chr8.113 Acer truncatum HOM05D003589 ORTHO05D005170 2.7e-15 87.4 202 32.7
PSO170G6362 Papaver somniferum HOM05D003589 ORTHO05D005170 2.2e-14 84.3 226 35.0
Psat3g118720 Pisum sativum HOM05D003589 ORTHO05D005170 3.8e-14 83.6 258 30.6
TAR633G1241 Trochodendron aralioides HOM05D003589 ORTHO05D005170 1.5e-13 81.6 263 30.4
SEGI_11810 Sequoiadendron giganteum HOM05D003589 ORTHO05D005170 2.5e-13 80.9 200 33.0
Nn5g26845 Nelumbo nucifera HOM05D003589 ORTHO05D005170 1.2e-12 78.6 194 33.5
FAN04G1782 Fragaria x ananassa HOM05D007666 ORTHO05D009567 4.7e-12 76.6 193 34.7
Hma1.2p1_0264F.1_g106130 Hydrangea macrophylla HOM05D003589 ORTHO05D005170 4.7e-12 76.6 225 33.8
Dinv34487 Davidia involucrata HOM05D003589 ORTHO05D005170 6.1e-12 76.3 215 32.6
Actinidia20793 Actinidia chinensis HOM05D003589 ORTHO05D005170 1.8e-11 74.7 221 29.9
Peaxi162Scf00732g00259 Petunia axillaris HOM05D003589 ORTHO05D005170 5.2e-11 73.2 207 29.5
Duzib151G0965 Durio zibethinus HOM05D003589 ORTHO05D005170 1.2e-10 72.0 223 29.1
Thecc.04G151400 Theobroma cacao HOM05D003589 ORTHO05D005170 1.2e-10 72.0 239 28.0
Solyc09g015530.3 Solanum lycopersicum HOM05D003589 ORTHO05D005170 1.5e-10 71.6 261 28.7
ClCG10G022760 Citrullus lanatus HOM05D003589 ORTHO05D005170 2.0e-10 71.2 208 31.7
Gohir.D02G003600 Gossypium hirsutum HOM05D003589 ORTHO05D005170 2.0e-10 71.2 256 28.5
Dinv16976 Davidia involucrata HOM05D003589 ORTHO05D005170 5.7e-10 69.7 296 27.0
Solyc08g082240.1 Solanum lycopersicum HOM05D007666 ORTHO05D009567 5.7e-10 69.7 67 58.2
Nitab4.5_0004433g0040 Nicotiana tabacum HOM05D003589 ORTHO05D005170 9.8e-10 68.9 265 27.2
Sopen09g009460 Solanum pennellii HOM05D003589 ORTHO05D005170 9.8e-10 68.9 261 28.4
PGSC0003DMG400026790 Solanum tuberosum HOM05D003589 ORTHO05D005170 9.8e-10 68.9 260 28.1
Dinv25345 Davidia involucrata HOM05D003589 ORTHO05D005170 1.3e-09 68.6 295 27.8
QL07p032102 Quercus lobata HOM05D003589 ORTHO05D005170 1.3e-09 68.6 266 29.7
MBI15_g01602_MAGBIO Magnolia biondii HOM05D003589 ORTHO05D005170 3.7e-09 67.0 318 26.1
Ah.15g090010 Amaranthus hybridus HOM05D003589 ORTHO05D005170 4.8e-09 66.6 224 29.5
Ca_02266_v3 Cicer arietinum L. HOM05D003589 ORTHO05D005170 4.8e-09 66.6 116 40.5
AUR62006418 Chenopodium quinoa HOM05D003589 ORTHO05D005170 2.4e-08 64.3 253 27.3
GSVIVG01030180001 Vitis vinifera HOM05D003589 ORTHO05D005170 2.4e-08 64.3 211 32.7
Glyma.09G274700 Glycine max HOM05D003589 ORTHO05D005170 3.1e-08 63.9 215 30.2
Manes.09G118000 Manihot esculenta HOM05D003589 ORTHO05D005170 3.1e-08 63.9 307 25.4
AagrBONN_evm.TU.Sc2ySwM_368.250 Anthoceros agrestis HOM05D029953 ORTHO05D009567 2.0e-07 61.2 268 25.0
TPR.G14123 Trifolium pratense HOM05D003589 ORTHO05D005170 2.0e-07 61.2 230 30.0
Actinidia31628 Actinidia chinensis HOM05D003589 ORTHO05D005170 4.5e-07 60.1 223 28.3
Nitab4.5_0000048g0030 Nicotiana tabacum HOM05D003589 ORTHO05D005170 4.5e-07 60.1 286 25.5
RcHm_v2.0_Chr3g0460451 Rosa chinensis HOM05D003589 ORTHO05D005170 5.9e-07 59.7 236 25.0
Rhsim04G0121600 Rhododendron simsii HOM05D003589 ORTHO05D005170 1.0e-06 58.9 190 30.5
Lj8A54T74 Lonicera japonica HOM05D003589 ORTHO05D005170 1.3e-06 58.5 205 30.2
Haze_21177 Corylus avellana HOM05D003589 ORTHO05D005170 3.8e-06 57.0 192 30.7


User provided reference genes

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