Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.07g196890 Amaranthus hybridus HOM05D007339 ORTHO05D009302 1.9e-209 732.3 368 100.0
EL10Ac5g12862 Beta vulgaris HOM05D007339 ORTHO05D009302 9.9e-150 533.9 315 83.5
AUR62019785 Chenopodium quinoa HOM05D007339 ORTHO05D009302 2.2e-149 532.7 314 82.5
AUR62010789 Chenopodium quinoa HOM05D007339 ORTHO05D009302 2.5e-145 519.2 314 80.3
Hund14247 Selenicereus undatus HOM05D007339 ORTHO05D009302 3.4e-142 508.8 314 78.0
Manes.02G014000 Manihot esculenta HOM05D007339 ORTHO05D009302 3.5e-131 472.2 314 72.3
TAR629G0408 Trochodendron aralioides HOM05D007339 ORTHO05D009302 9.0e-127 457.6 315 71.7
Cfa012282 Carpinus fangiana HOM05D007339 ORTHO05D009302 5.8e-126 454.9 315 72.4
MD14G1117300 Malus domestica HOM05D007339 ORTHO05D009302 1.9e-124 449.9 316 70.6
TWI60G1048 Tripterygium wilfordii HOM05D007339 ORTHO05D009302 2.5e-124 449.5 314 70.4
Lalb_Chr05g0224341 Lupinus albus HOM05D007339 ORTHO05D009302 4.2e-124 448.7 316 69.6
QL02p032076 Quercus lobata HOM05D007339 ORTHO05D009302 7.1e-124 448.0 314 70.7
Sabra03G0097300 Salix brachista HOM05D007339 ORTHO05D009302 7.9e-123 444.5 319 69.3
DCAR_027743 Daucus carota HOM05D007339 ORTHO05D009302 1.0e-122 444.1 312 69.9
Actinidia01410 Actinidia chinensis HOM05D007339 ORTHO05D009302 1.3e-122 443.7 315 69.8
CANSAT21G2628 Cannabis sativa HOM05D007339 ORTHO05D009302 1.3e-122 443.7 317 71.0
Lj4g0000586 Lotus japonicus HOM05D007339 ORTHO05D009302 1.3e-122 443.7 318 69.5
LjContig00001g0019220 Lotus japonicus HOM05D007339 ORTHO05D009302 1.3e-122 443.7 318 69.5
LjContig00001g0022561 Lotus japonicus HOM05D007339 ORTHO05D009302 1.3e-122 443.7 318 69.5
Potri.003G135200 Populus trichocarpa HOM05D007339 ORTHO05D009302 1.3e-122 443.7 319 69.0
RcHm_v2.0_Chr7g0195891 Rosa chinensis HOM05D007339 ORTHO05D009302 1.3e-122 443.7 315 69.5
FAN04G0801 Fragaria x ananassa HOM05D007339 ORTHO05D009302 1.8e-122 443.4 314 71.0
Glyma.05G213600 Glycine max HOM05D007339 ORTHO05D009302 2.3e-122 443.0 316 69.3
arahy.Tifrunner.gnm1.ann1.CS5PRD Arachis hypogaea HOM05D007339 ORTHO05D009302 3.0e-122 442.6 317 69.4
CSS0003086 Camellia sinensis var. sinensis HOM05D007339 ORTHO05D009302 3.9e-122 442.2 315 68.6
FAN08G0386 Fragaria x ananassa HOM05D007339 ORTHO05D009302 5.1e-122 441.8 314 70.4
Sc01g0010030 Simmondsia chinensis HOM05D007339 ORTHO05D009302 5.1e-122 441.8 314 68.5
Thecc.03G290600 Theobroma cacao HOM05D007339 ORTHO05D009302 8.7e-122 441.0 315 68.9
CsaV3_2G033870 Cucumis sativus L. HOM05D007339 ORTHO05D009302 1.5e-121 440.3 314 68.2
Rhsim02G0238900 Rhododendron simsii HOM05D007339 ORTHO05D009302 1.5e-121 440.3 314 68.2
arahy.Tifrunner.gnm1.ann1.3U28WJ Arachis hypogaea HOM05D007339 ORTHO05D009302 4.3e-121 438.7 317 68.8
vmacro11423 Vaccinium macrocarpon HOM05D007339 ORTHO05D009302 5.7e-121 438.3 351 64.1
VMungo0251G0376 Vigna mungo HOM05D007339 ORTHO05D009302 5.7e-121 438.3 318 68.6
arahy.Tifrunner.gnm1.ann1.XUAZ2L Arachis hypogaea HOM05D007339 ORTHO05D009302 7.4e-121 438.0 317 68.8
COL.COLO4_21749 Corchorus olitorius HOM05D007339 ORTHO05D009302 9.7e-121 437.6 314 69.7
Gohir.D12G235400 Gossypium hirsutum HOM05D007339 ORTHO05D009302 1.3e-120 437.2 314 69.1
ECA246G1762 Erigeron canadensis HOM05D007339 ORTHO05D009302 1.6e-120 436.8 314 68.5
Gorai.008G251600 Gossypium raimondii HOM05D007339 ORTHO05D009302 2.2e-120 436.4 314 69.1
Cpa.g.c31793 Carica papaya HOM05D007339 ORTHO05D009302 2.8e-120 436.0 322 67.4
Gohir.A12G231900 Gossypium hirsutum HOM05D007339 ORTHO05D009302 6.3e-120 434.9 314 68.8
Lsat_1_v5_gn_3_9640 Lactuca sativa HOM05D007339 ORTHO05D009302 6.3e-120 434.9 314 67.8
Dinv37563 Davidia involucrata HOM05D007339 ORTHO05D009302 1.1e-119 434.1 349 62.8
Phvul.002G295000 Phaseolus vulgaris HOM05D007339 ORTHO05D009302 1.4e-119 433.7 318 66.7
Cc08_g15580 Coffea canephora HOM05D007339 ORTHO05D009302 2.4e-119 433.0 315 68.3
Ca_17504_v3 Cicer arietinum L. HOM05D007339 ORTHO05D009302 3.1e-119 432.6 314 67.2
MELO3C008161.2 Cucumis melo HOM05D007339 ORTHO05D009302 4.1e-119 432.2 314 66.9
Nn1g08390 Nelumbo nucifera HOM05D007339 ORTHO05D009302 6.9e-119 431.4 314 66.2
HanXRQChr17g0535521 Helianthus annuus HOM05D007339 ORTHO05D009302 9.0e-119 431.0 314 67.8
PGSC0003DMG400005010 Solanum tuberosum HOM05D007339 ORTHO05D009302 2.0e-118 429.9 318 65.7
ClCG11G007690 Citrullus lanatus HOM05D007339 ORTHO05D009302 5.9e-118 428.3 314 67.8
Sed0025077 Sechium edule HOM05D007339 ORTHO05D009302 5.9e-118 428.3 314 67.2
Solyc12g056150.2 Solanum lycopersicum HOM05D007339 ORTHO05D009302 5.9e-118 428.3 318 66.0
FAN13G2341 Fragaria x ananassa HOM05D007339 ORTHO05D009302 7.6e-118 427.9 314 69.1
Sopen12g028660 Solanum pennellii HOM05D007339 ORTHO05D009302 7.6e-118 427.9 318 66.0
PGR031G1180 Punica granatum HOM05D007339 ORTHO05D009302 3.8e-117 425.6 314 64.6
Oeu008834.1 Olea europaea HOM05D007339 ORTHO05D009302 5.0e-117 425.2 318 66.4
Medtr8g099160 Medicago truncatula HOM05D007339 ORTHO05D009302 1.9e-116 423.3 319 66.8
Psat7g028320 Pisum sativum HOM05D007339 ORTHO05D009302 1.2e-115 420.6 316 64.6
CDE03G0219 Ceratophyllum demersum HOM05D007339 ORTHO05D009302 1.6e-115 420.2 315 66.3
SalBow1G6752 Salvia bowleyana HOM05D007339 ORTHO05D009302 1.8e-114 416.8 316 65.5
Migut.E01224 Erythranthe guttata HOM05D007339 ORTHO05D009302 3.0e-114 416.0 318 67.9
Eucgr.D01785 Eucalyptus grandis HOM05D007339 ORTHO05D009302 2.5e-113 412.9 314 62.7
Prupe.5G112000 Prunus persica HOM05D007339 ORTHO05D009302 3.3e-113 412.5 316 67.7
MBI11_g02478_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 9.7e-113 411.0 357 59.7
CAN.G868.7 Capsicum annuum HOM05D007339 ORTHO05D009302 1.7e-112 410.2 316 63.9
unitig_22.g6184 Utricularia gibba HOM05D007339 ORTHO05D009302 1.1e-111 407.5 316 63.6
Peaxi162Scf00117g01517 Petunia axillaris HOM05D007339 ORTHO05D009302 1.4e-111 407.1 316 62.3
MBI11_g07997_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 1.5e-110 403.7 375 56.3
Lj2A174T87 Lonicera japonica HOM05D007339 ORTHO05D009302 5.0e-109 398.7 318 63.8
Haze_08703 Corylus avellana HOM05D007339 ORTHO05D009302 6.5e-109 398.3 315 65.4
FAN13G1997 Fragaria x ananassa HOM05D007339 ORTHO05D009302 6.5e-109 398.3 314 65.3
Eucgr.D01783 Eucalyptus grandis HOM05D007339 ORTHO05D009302 1.9e-108 396.7 314 61.5
ATR0585G140 Amborella trichopoda HOM05D007339 ORTHO05D009302 1.4e-106 390.6 314 61.5
HPP92_020016 Vanilla planifolia HOM05D007339 ORTHO05D009302 2.3e-106 389.8 315 59.4
GSVIVG01019463001 Vitis vinifera HOM05D007339 ORTHO05D009302 8.8e-106 387.9 314 61.8
Zm00001eb119650 Zea mays HOM05D007339 ORTHO05D009302 3.7e-104 382.5 318 58.5
Duzib068G0257 Durio zibethinus HOM05D007339 ORTHO05D009302 1.5e-102 377.1 281 66.5
Nitab4.5_0002381g0050 Nicotiana tabacum HOM05D007339 ORTHO05D009302 3.7e-96 355.9 316 57.3
Nitab4.5_0004603g0010 Nicotiana tabacum HOM05D007339 ORTHO05D009302 1.3e-93 347.4 317 57.1
CiPaw.11G126100 Carya illinoinensis HOM05D007339 ORTHO05D009302 3.6e-91 339.3 314 56.1
QL02p032031 Quercus lobata HOM05D007339 ORTHO05D009302 1.5e-89 334.0 237 69.6
Mapoly0105s0048 Marchantia polymorpha HOM05D007339 ORTHO05D009302 3.8e-85 319.3 311 49.8
AagrBONN_evm.TU.Sc2ySwM_362.1772 Anthoceros agrestis HOM05D007339 ORTHO05D009302 3.0e-82 309.7 306 50.7
Pp3c9_13440 Physcomitrium patens HOM05D007339 ORTHO05D009302 9.8e-81 304.7 308 50.0
SGA_v2.0_scaffold111G31453 Striga asiatica HOM05D007339 ORTHO05D009302 1.8e-79 300.4 324 52.5
Atru.chr9.2070 Acer truncatum HOM05D007339 ORTHO05D009302 5.0e-77 292.4 190 76.8
SMO340G0099 Selaginella moellendorffii HOM05D007339 ORTHO05D009302 4.2e-76 289.3 309 48.5
Atru.chr9.2069 Acer truncatum HOM05D007339 ORTHO05D009302 4.4e-73 279.3 301 53.2
Eucgr.D01784 Eucalyptus grandis HOM05D007339 ORTHO05D009302 1.2e-70 271.2 308 49.0
TPR.G3408 Trifolium pratense HOM05D007339 ORTHO05D009302 3.7e-56 223.0 177 62.1
Glyma.08G020200 Glycine max HOM05D007339 ORTHO05D009302 4.9e-56 222.6 150 72.0
CBR_g55541 Chara braunii HOM05D007339 ORTHO05D009302 2.5e-52 210.3 441 32.0
TPR.G11473 Trifolium pratense HOM05D007339 ORTHO05D009302 1.9e-47 194.1 138 68.8
SEGI_02509 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 1.2e-38 164.9 132 61.4
SEGI_37819 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 1.2e-38 164.9 132 61.4
SEGI_02101 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 1.0e-29 135.2 131 51.9
AagrBONN_evm.TU.Sc2ySwM_368.3145 Anthoceros agrestis HOM05D007339 ORTHO05D009302 6.2e-27 125.9 161 44.1
Cre06.g285001 Chlamydomonas reinhardtii HOM05D007339 ORTHO05D009302 3.8e-24 116.7 219 36.5
Sc20g0000110 Simmondsia chinensis HOM05D007339 ORTHO05D009302 2.5e-20 104.0 86 53.5
SEGI_11472 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 1.8e-18 97.8 84 53.6
QL02p032024 Quercus lobata HOM05D007339 ORTHO05D009302 3.8e-16 90.1 62 72.6
Os01g0221900 Oryza sativa ssp. japonica HOM05D007339 ORTHO05D009302 3.2e-15 87.0 87 41.4
Dinv27585 Davidia involucrata HOM05D007339 ORTHO05D009302 3.7e-11 73.6 54 66.7
Rhsim12G0211900 Rhododendron simsii HOM05D003090 ORTHO05D003495 9.3e-07 58.9 48 56.2


User provided reference genes

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