Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.07g196880 Amaranthus hybridus HOM05D001461 ORTHO05D005534 6.9e-59 230.3 109 100.0
FAN04G2189 Fragaria x ananassa HOM05D001461 ORTHO05D002801 3.3e-37 158.3 101 73.3
FAN08G0967 Fragaria x ananassa HOM05D001461 ORTHO05D005534 3.3e-37 158.3 101 73.3
FAN13G1856 Fragaria x ananassa HOM05D001461 ORTHO05D005534 5.7e-37 157.5 101 73.3
FvH4_5g03750 Fragaria vesca HOM05D001461 ORTHO05D005534 1.7e-36 156.0 101 72.3
RcHm_v2.0_Chr7g0195901 Rosa chinensis HOM05D001461 ORTHO05D005534 1.7e-36 156.0 101 71.3
MBI07_g06330_MAGBIO Magnolia biondii HOM05D001461 ORTHO05D005534 2.8e-36 155.2 98 73.5
GSVIVG01019462001 Vitis vinifera HOM05D001461 ORTHO05D002801 3.7e-36 154.8 98 73.5
Atru.chr9.2071 Acer truncatum HOM05D001461 ORTHO05D005534 4.8e-36 154.5 101 71.3
MBI15_g19879_MAGBIO Magnolia biondii HOM05D001461 ORTHO05D005534 4.8e-36 154.5 98 73.5
CANSAT21G0685 Cannabis sativa HOM05D001461 ORTHO05D005534 6.3e-36 154.1 98 73.5
FAN13G2166 Fragaria x ananassa HOM05D001461 ORTHO05D005534 1.1e-35 153.3 101 71.3
Actinidia10093 Actinidia chinensis HOM05D001461 ORTHO05D005534 1.4e-35 152.9 98 71.4
RcHm_v2.0_Chr6g0304921 Rosa chinensis HOM05D001461 ORTHO05D005534 1.4e-35 152.9 101 71.3
CSS0015159 Camellia sinensis var. sinensis HOM05D001461 ORTHO05D005534 1.8e-35 152.5 107 67.3
CSS0025412 Camellia sinensis var. sinensis HOM05D001461 ORTHO05D005534 1.8e-35 152.5 107 67.3
TPR.G6688 Trifolium pratense HOM05D001461 ORTHO05D005534 1.8e-35 152.5 98 72.4
HanXRQChr04g0120651 Helianthus annuus HOM05D001461 ORTHO05D005534 2.4e-35 152.1 100 69.0
Medtr5g009740 Medicago truncatula HOM05D001461 ORTHO05D005534 3.1e-35 151.8 98 72.4
Sed0013897 Sechium edule HOM05D001461 ORTHO05D005534 3.1e-35 151.8 103 69.9
CiPaw.12G086700 Carya illinoinensis HOM05D001461 ORTHO05D005534 4.1e-35 151.4 103 69.9
MELO3C008160.2 Cucumis melo HOM05D001461 ORTHO05D005534 4.1e-35 151.4 103 69.9
CsaV3_2G033880 Cucumis sativus L. HOM05D001461 ORTHO05D005534 4.1e-35 151.4 103 69.9
LjContig00001g0001336 Lotus japonicus HOM05D001461 ORTHO05D005534 4.1e-35 151.4 99 72.7
LjContig00001g0023327 Lotus japonicus HOM05D001461 ORTHO05D005534 4.1e-35 151.4 99 72.7
Nn7g37350 Nelumbo nucifera HOM05D001461 ORTHO05D005534 4.1e-35 151.4 98 71.4
Potri.003G135100 Populus trichocarpa HOM05D001461 ORTHO05D005534 4.1e-35 151.4 100 72.0
ClCG11G007680 Citrullus lanatus HOM05D001461 ORTHO05D005534 5.3e-35 151.0 103 69.9
TWI18G0300 Tripterygium wilfordii HOM05D001461 ORTHO05D005534 5.3e-35 151.0 101 68.3
TWI60G0303 Tripterygium wilfordii HOM05D001461 ORTHO05D005534 5.3e-35 151.0 101 68.3
Hma1.2p1_0384F.1_g140900 Hydrangea macrophylla HOM05D001461 ORTHO05D005534 7.0e-35 150.6 98 74.5
Gohir.A12G232000 Gossypium hirsutum HOM05D001461 ORTHO05D005534 9.1e-35 150.2 98 71.4
Gohir.D12G235300 Gossypium hirsutum HOM05D001461 ORTHO05D005534 9.1e-35 150.2 98 71.4
Gorai.008G251500 Gossypium raimondii HOM05D001461 ORTHO05D005534 9.1e-35 150.2 98 71.4
Solyc11g062280.2 Solanum lycopersicum HOM05D001461 ORTHO05D005534 9.1e-35 150.2 98 72.4
Sopen11g024260 Solanum pennellii HOM05D001461 ORTHO05D005534 9.1e-35 150.2 98 72.4
PGSC0003DMG401032495 Solanum tuberosum HOM05D001461 ORTHO05D005534 9.1e-35 150.2 98 72.4
Os06g0158700 Oryza sativa ssp. japonica HOM05D001461 ORTHO05D005534 1.2e-34 149.8 98 70.4
Hma1.2p1_0397F.1_g143760 Hydrangea macrophylla HOM05D001461 ORTHO05D005534 1.6e-34 149.4 100 71.0
Duzib084G0256 Durio zibethinus HOM05D001461 ORTHO05D005534 2.0e-34 149.1 101 67.3
PGR042G3251 Punica granatum HOM05D001461 ORTHO05D005534 2.0e-34 149.1 98 69.4
Aqoxy6G01756 Aquilegia oxysepala HOM05D001461 ORTHO05D005534 2.7e-34 148.7 95 73.7
Aqoxy6G01758 Aquilegia oxysepala HOM05D001461 ORTHO05D005534 2.7e-34 148.7 95 73.7
CAN.G375.83 Capsicum annuum HOM05D001461 ORTHO05D005534 2.7e-34 148.7 98 71.4
Lsat_1_v5_gn_7_2481 Lactuca sativa HOM05D001461 ORTHO05D005534 2.7e-34 148.7 99 66.7
PGSC0003DMG400007048 Solanum tuberosum HOM05D001461 ORTHO05D005534 2.7e-34 148.7 98 71.4
COL.COLO4_21750 Corchorus olitorius HOM05D001461 ORTHO05D005534 3.5e-34 148.3 101 67.3
Lalb_Chr09g0332711 Lupinus albus HOM05D001461 ORTHO05D005534 3.5e-34 148.3 98 72.4
MD15G1108200 Malus domestica HOM05D001461 ORTHO05D005534 3.5e-34 148.3 101 68.3
Manes.02G014100 Manihot esculenta HOM05D001461 ORTHO05D005534 3.5e-34 148.3 101 70.3
Nitab4.5_0000492g0140 Nicotiana tabacum HOM05D001461 ORTHO05D005534 3.5e-34 148.3 98 71.4
Nitab4.5_0002026g0080 Nicotiana tabacum HOM05D001461 ORTHO05D005534 3.5e-34 148.3 98 71.4
Sabra03G0097400 Salix brachista HOM05D001461 ORTHO05D005534 3.5e-34 148.3 110 65.5
Zm00001eb376190 Zea mays HOM05D001461 ORTHO05D005534 3.5e-34 148.3 101 67.3
Zm00001eb376220 Zea mays HOM05D001461 ORTHO05D005534 3.5e-34 148.3 101 67.3
Zm00001eb376260 Zea mays HOM05D001461 ORTHO05D005534 3.5e-34 148.3 101 67.3
Zm00001eb376310 Zea mays HOM05D001461 ORTHO05D005534 3.5e-34 148.3 101 67.3
Zm00001eb376910 Zea mays HOM05D001461 ORTHO05D005534 3.5e-34 148.3 101 67.3
Zm00001eb376940 Zea mays HOM05D001461 ORTHO05D005534 3.5e-34 148.3 101 67.3
Eucgr.E00823 Eucalyptus grandis HOM05D001461 ORTHO05D005534 4.5e-34 147.9 98 69.4
Psat2g033040 Pisum sativum HOM05D001461 ORTHO05D005534 4.5e-34 147.9 98 71.4
SalBow3G1410 Salvia bowleyana HOM05D001461 ORTHO05D005534 5.9e-34 147.5 101 68.3
Thecc.03G290500 Theobroma cacao HOM05D001461 ORTHO05D005534 5.9e-34 147.5 101 68.3
Dinv32542 Davidia involucrata HOM05D001461 ORTHO05D005534 7.7e-34 147.1 98 71.4
Phvul.002G161800 Phaseolus vulgaris HOM05D001461 ORTHO05D005534 1.0e-33 146.7 98 68.4
Zm00001eb376350 Zea mays HOM05D001461 ORTHO05D005534 1.0e-33 146.7 98 68.4
VMungo1215G2099 Vigna mungo HOM05D001461 ORTHO05D005534 1.7e-33 146.0 98 68.4
ATR0580G205 Amborella trichopoda HOM05D001461 ORTHO05D005534 2.2e-33 145.6 100 68.0
CSS0041928 Camellia sinensis var. sinensis HOM05D001461 ORTHO05D005534 2.2e-33 145.6 101 66.3
Prupe.1G460500 Prunus persica HOM05D001461 ORTHO05D005534 2.2e-33 145.6 101 66.3
arahy.Tifrunner.gnm1.ann1.PFJ4ZJ Arachis hypogaea HOM05D001461 ORTHO05D005534 2.9e-33 145.2 98 69.4
Glyma.11G019700 Glycine max HOM05D001461 ORTHO05D005534 2.9e-33 145.2 98 66.3
Prupe.5G111900 Prunus persica HOM05D001461 ORTHO05D005534 2.9e-33 145.2 105 69.5
arahy.Tifrunner.gnm1.ann1.Z0SXD6 Arachis hypogaea HOM05D001461 ORTHO05D005534 3.8e-33 144.8 98 69.4
DCAR_025235 Daucus carota HOM05D001461 ORTHO05D005534 5.0e-33 144.4 100 67.0
ECA236G4284 Erigeron canadensis HOM05D001461 ORTHO05D005534 5.0e-33 144.4 98 66.3
Migut.B01819 Erythranthe guttata HOM05D001461 ORTHO05D005534 5.0e-33 144.4 101 69.3
PSO384G4702 Papaver somniferum HOM05D001461 ORTHO05D005534 6.5e-33 144.1 105 64.8
CARHR046740 Cardamine hirsuta HOM05D001461 ORTHO05D005534 8.5e-33 143.7 103 63.1
Migut.E01260 Erythranthe guttata HOM05D001461 ORTHO05D005534 8.5e-33 143.7 101 68.3
FvH4_5g27350 Fragaria vesca HOM05D001461 ORTHO05D005534 8.5e-33 143.7 98 69.4
Peaxi162Scf00029g02519 Petunia axillaris HOM05D001461 ORTHO05D005534 8.5e-33 143.7 98 69.4
MSTRG.20880 Avicennia marina HOM05D001461 ORTHO05D005534 1.1e-32 143.3 101 69.3
Glyma.01G223800 Glycine max HOM05D001461 ORTHO05D005534 1.1e-32 143.3 98 68.4
LjContig00312_ERROPOS870357g0027559 Lotus japonicus HOM05D001461 ORTHO05D005534 1.1e-32 143.3 98 68.4
Aa31LG2G1220 Aethionema arabicum HOM05D001461 ORTHO05D002801 1.9e-32 142.5 103 62.1
Cc03_g08310 Coffea canephora HOM05D001461 ORTHO05D005534 1.9e-32 142.5 101 72.3
Thhalv10023764m.g Eutrema salsugineum HOM05D001461 ORTHO05D005534 1.9e-32 142.5 103 63.1
FAN28G0268 Fragaria x ananassa HOM05D001461 ORTHO05D005534 1.9e-32 142.5 98 68.4
BcaB07g31442 Brassica carinata HOM05D001461 ORTHO05D005534 2.5e-32 142.1 103 62.1
BcaB07g31521 Brassica carinata HOM05D001461 ORTHO05D005534 2.5e-32 142.1 103 62.1
A09p14930 Brassica napus HOM05D001461 ORTHO05D005534 2.5e-32 142.1 103 62.1
BraA09t37138Z Brassica rapa HOM05D001461 ORTHO05D005534 2.5e-32 142.1 103 62.1
Nitab4.5_0004629g0090 Nicotiana tabacum HOM05D001461 ORTHO05D005534 2.5e-32 142.1 121 59.5
BcaC04g22537 Brassica carinata HOM05D001461 ORTHO05D005534 4.2e-32 141.4 103 62.1
C09p18050 Brassica napus HOM05D001461 ORTHO05D005534 4.2e-32 141.4 103 62.1
BolC9t54702H Brassica oleracea HOM05D001461 ORTHO05D005534 4.2e-32 141.4 103 62.1
Glyma.15G246700 Glycine max HOM05D001461 ORTHO05D005534 4.2e-32 141.4 98 66.3
ECA233G4373 Erigeron canadensis HOM05D001461 ORTHO05D005534 5.5e-32 141.0 99 64.6
A09p14170 Brassica napus HOM05D001461 ORTHO05D005534 7.2e-32 140.6 103 61.2
BraA09t37065Z Brassica rapa HOM05D001461 ORTHO05D005534 7.2e-32 140.6 103 61.2
Thhalv10027655m.g Eutrema salsugineum HOM05D001461 ORTHO05D002801 9.4e-32 140.2 101 64.4
FAN18G4081 Fragaria x ananassa HOM05D001461 ORTHO05D005534 9.4e-32 140.2 98 68.4
Thecc.02G012600 Theobroma cacao HOM05D001461 ORTHO05D005534 9.4e-32 140.2 101 65.3
Carub.0002s0062 Capsella rubella HOM05D001461 ORTHO05D005534 1.6e-31 139.4 103 61.2
AUR62004435 Chenopodium quinoa HOM05D001461 ORTHO05D005534 1.6e-31 139.4 101 64.4
AUR62023513 Chenopodium quinoa HOM05D001461 ORTHO05D005534 1.6e-31 139.4 101 64.4
AT1G64185 Arabidopsis thaliana HOM05D001461 ORTHO05D005534 2.1e-31 139.0 103 61.2
AT5G41650 Arabidopsis thaliana HOM05D001461 ORTHO05D005534 2.1e-31 139.0 101 63.4
C09p17080 Brassica napus HOM05D001461 ORTHO05D005534 2.1e-31 139.0 103 60.2
BolC9t54606H Brassica oleracea HOM05D001461 ORTHO05D005534 2.1e-31 139.0 103 60.2
AL2G10830 Arabidopsis lyrata HOM05D001461 ORTHO05D005534 2.7e-31 138.7 103 61.2
EL10Ac1g00327 Beta vulgaris HOM05D001461 ORTHO05D005534 2.7e-31 138.7 101 63.4
Sc01g0010020 Simmondsia chinensis HOM05D001461 ORTHO05D005534 2.7e-31 138.7 99 66.7
CARHR212880 Cardamine hirsuta HOM05D001461 ORTHO05D005534 3.6e-31 138.3 101 63.4
SEGI_29517 Sequoiadendron giganteum HOM05D001461 ORTHO05D005534 3.6e-31 138.3 98 64.3
Migut.E01261 Erythranthe guttata HOM05D001461 ORTHO05D005534 4.7e-31 137.9 100 66.0
SGA_v2.0_scaffold4G02266 Striga asiatica HOM05D001461 ORTHO05D005534 4.7e-31 137.9 101 66.3
SGA_v2.0_scaffold95G28797 Striga asiatica HOM05D001461 ORTHO05D005534 4.7e-31 137.9 101 66.3
BcaC04g22646 Brassica carinata HOM05D001461 ORTHO05D005534 6.1e-31 137.5 105 59.0
Lj4g0014781 Lotus japonicus HOM05D001461 ORTHO05D005534 1.0e-30 136.7 98 67.3
Rhsim07G0008500 Rhododendron simsii HOM05D001461 ORTHO05D005534 5.2e-30 134.4 147 49.0
HPP92_002836 Vanilla planifolia HOM05D001461 ORTHO05D005534 6.8e-30 134.0 97 66.0
unitig_62.g23802 Utricularia gibba HOM05D001461 ORTHO05D005534 3.4e-29 131.7 112 58.0
Carub.0007s3383 Capsella rubella HOM05D001461 ORTHO05D005534 4.4e-29 131.3 101 60.4
Sed0026937 Sechium edule HOM05D001461 ORTHO05D005534 4.4e-29 131.3 103 63.1
Lj4g0009029 Lotus japonicus HOM05D001461 ORTHO05D005534 2.8e-28 128.6 88 70.5
Lsat_1_v5_gn_5_108040 Lactuca sativa HOM05D001461 ORTHO05D005534 6.3e-28 127.5 99 60.6
Hund27230 Selenicereus undatus HOM05D001461 ORTHO05D005534 3.1e-27 125.2 98 63.3
Sc01g0003060 Simmondsia chinensis HOM05D001461 ORTHO05D005534 2.0e-26 122.5 98 62.2
MD08G1128900 Malus domestica HOM05D001461 ORTHO05D005534 1.1e-24 116.7 98 58.2
AagrBONN_evm.TU.Sc2ySwM_344.4522 Anthoceros agrestis HOM05D001461 ORTHO05D005534 1.5e-24 116.3 100 59.0
TPR.G32972 Trifolium pratense HOM05D001461 ORTHO05D005534 5.5e-24 114.4 79 69.6
Pp3c1_2350 Physcomitrium patens HOM05D001461 ORTHO05D005534 2.6e-21 105.5 98 51.0
Mapoly0143s0026 Marchantia polymorpha HOM05D001461 ORTHO05D005534 2.8e-20 102.1 98 49.0
SMO364G0470 Selaginella moellendorffii HOM05D001461 ORTHO05D005534 3.1e-19 98.6 96 50.0
Cfa012281 Carpinus fangiana HOM05D001461 ORTHO05D005534 8.6e-17 90.5 52 75.0
QL02p032078 Quercus lobata HOM05D001461 ORTHO05D005534 8.6e-17 90.5 52 75.0
Zm00001eb376320 Zea mays HOM05D001461 ORTHO05D005534 8.6e-17 90.5 51 76.5
Actinidia28489 Actinidia chinensis HOM05D001461 ORTHO05D005534 5.6e-16 87.8 52 73.1
MD14G1117200 Malus domestica HOM05D001461 ORTHO05D005534 5.6e-16 87.8 53 67.9
arahy.Tifrunner.gnm1.ann1.2LVS12 Arachis hypogaea HOM05D001461 ORTHO05D005534 2.1e-15 85.9 73 58.9
MD08G1130100 Malus domestica HOM05D001461 ORTHO05D005534 1.3e-12 76.6 52 59.6
vmacro13208 Vaccinium macrocarpon HOM05D001461 ORTHO05D005534 5.4e-11 71.2 48 68.8
Glyma.06G264500 Glycine max HOM05D001461 ORTHO05D005534 7.0e-11 70.9 43 72.1
Oeu054373.3 Olea europaea HOM05D000540 ORTHO05D000681 1.2e-10 70.1 45 68.9
Oeu063667.1 Olea europaea HOM05D001461 ORTHO05D005534 1.2e-10 70.1 45 68.9
arahy.Tifrunner.gnm1.ann1.F4HMTZ Arachis hypogaea HOM05D001461 ORTHO05D005534 2.0e-10 69.3 55 63.6
Glyma.05G213500 Glycine max HOM05D001461 ORTHO05D005534 2.7e-10 68.9 46 67.4
Lj9C594G4 Lonicera japonica HOM05D001461 ORTHO05D005534 7.8e-10 67.4 47 68.1
FAN13G0962 Fragaria x ananassa HOM05D001461 ORTHO05D005534 1.0e-09 67.0 50 62.0
arahy.Tifrunner.gnm1.ann1.NAT0LD Arachis hypogaea HOM05D001461 ORTHO05D005534 2.3e-09 65.9 42 71.4
Ciclev10022889m.g Citrus clementina HOM05D001461 ORTHO05D005534 3.0e-09 65.5 45 66.7
Glyma.08G020100 Glycine max HOM05D001461 ORTHO05D005534 3.0e-09 65.5 66 53.0
RcHm_v2.0_Chr5g0061641 Rosa chinensis HOM05D001461 ORTHO05D005534 6.6e-09 64.3 42 69.0
Zm00001eb376250 Zea mays HOM05D001461 ORTHO05D005534 2.5e-08 62.4 45 64.4
MCO07G452 Micromonas commoda HOM05D001461 ORTHO05D005534 3.3e-08 62.0 114 34.2
PRCOL_00003773 Prasinoderma coloniale HOM05D001461 ORTHO05D005534 2.3e-06 55.8 119 33.6
Sopen07g030150 Solanum pennellii HOM05D018748 ORTHO05D009630 6.8e-06 54.3 39 64.1


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