Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.06g196060 Amaranthus hybridus HOM05D003486 ORTHO05D004600 3.8e-67 258.1 132 100.0
Ah.07g206270 Amaranthus hybridus HOM05D003486 ORTHO05D004600 6.5e-19 97.8 95 50.5
Hund03158 Selenicereus undatus HOM05D003486 ORTHO05D004600 2.8e-14 82.4 87 48.3
Migut.G01067 Erythranthe guttata HOM05D003486 ORTHO05D004600 1.1e-13 80.5 115 39.1
PGR083G0732 Punica granatum HOM05D003486 ORTHO05D004600 1.4e-13 80.1 113 40.7
Rhsim02G0076900 Rhododendron simsii HOM05D003486 ORTHO05D004600 1.4e-13 80.1 110 42.7
Potri.007G128300 Populus trichocarpa HOM05D003486 ORTHO05D004600 1.8e-13 79.7 112 42.0
QL10p048816 Quercus lobata HOM05D003486 ORTHO05D004600 5.3e-13 78.2 113 40.7
VMungo1127G0960 Vigna mungo HOM05D003486 ORTHO05D004600 5.3e-13 78.2 113 38.9
CSS0039550 Camellia sinensis var. sinensis HOM05D003486 ORTHO05D004600 7.0e-13 77.8 112 41.1
Eucgr.A00081 Eucalyptus grandis HOM05D003486 ORTHO05D004600 9.1e-13 77.4 115 39.1
Sabra07G0104700 Salix brachista HOM05D003486 ORTHO05D004600 9.1e-13 77.4 112 40.2
TWI15G0158 Tripterygium wilfordii HOM05D003486 ORTHO05D004600 1.2e-12 77.0 115 40.9
TWI15G0580 Tripterygium wilfordii HOM05D003486 ORTHO05D004600 1.2e-12 77.0 115 40.9
Psat7g214880 Pisum sativum HOM05D003486 ORTHO05D004600 1.6e-12 76.6 113 39.8
Atru.chr3.1489 Acer truncatum HOM05D003486 ORTHO05D004600 2.0e-12 76.3 115 38.3
Duzib151G0706 Durio zibethinus HOM05D003486 ORTHO05D004600 2.0e-12 76.3 138 38.4
Lsat_1_v5_gn_3_115420 Lactuca sativa HOM05D003486 ORTHO05D004600 2.6e-12 75.9 116 40.5
Prupe.1G194100 Prunus persica HOM05D003486 ORTHO05D004600 2.6e-12 75.9 139 36.0
Lj3g0017553 Lotus japonicus HOM05D003486 ORTHO05D004600 4.5e-12 75.1 133 39.1
HanXRQChr03g0091131 Helianthus annuus HOM05D003486 ORTHO05D004600 5.9e-12 74.7 115 37.4
AagrBONN_evm.TU.Sc2ySwM_344.2066 Anthoceros agrestis HOM05D003486 ORTHO05D004600 7.7e-12 74.3 113 37.2
Ca_20787_v3 Cicer arietinum L. HOM05D003486 ORTHO05D004600 7.7e-12 74.3 133 39.8
Lalb_Chr01g0003151 Lupinus albus HOM05D003486 ORTHO05D004600 7.7e-12 74.3 133 39.8
Cc03_g12950 Coffea canephora HOM05D003486 ORTHO05D004600 1.0e-11 73.9 136 37.5
Dinv44191 Davidia involucrata HOM05D003486 ORTHO05D004600 1.0e-11 73.9 115 36.5
EL10Ac3g05937 Beta vulgaris HOM05D003486 ORTHO05D004600 1.3e-11 73.6 140 38.6
Sed0025407 Sechium edule HOM05D003486 ORTHO05D004600 1.3e-11 73.6 114 40.4
CANSAT78G0197 Cannabis sativa HOM05D003486 ORTHO05D004600 1.7e-11 73.2 140 35.7
Medtr4g067160 Medicago truncatula HOM05D003486 ORTHO05D004600 1.7e-11 73.2 140 37.1
Phvul.011G054400 Phaseolus vulgaris HOM05D003486 ORTHO05D004600 1.7e-11 73.2 135 37.0
GSVIVG01010758001 Vitis vinifera HOM05D003486 ORTHO05D004600 1.7e-11 73.2 68 51.5
Cfa015169 Carpinus fangiana HOM05D003486 ORTHO05D004600 2.2e-11 72.8 117 35.9
Haze_01509 Corylus avellana HOM05D003486 ORTHO05D004600 2.2e-11 72.8 115 35.7
SEGI_08545 Sequoiadendron giganteum HOM05D003486 ORTHO05D004600 2.2e-11 72.8 114 40.4
Sc19g0002660 Simmondsia chinensis HOM05D003486 ORTHO05D004600 2.2e-11 72.8 139 38.1
Zm00001eb078800 Zea mays HOM05D003486 ORTHO05D004600 2.2e-11 72.8 136 38.2
AUR62002305 Chenopodium quinoa HOM05D003486 ORTHO05D004600 2.9e-11 72.4 140 38.6
AUR62015385 Chenopodium quinoa HOM05D003486 ORTHO05D004600 2.9e-11 72.4 140 38.6
Ciclev10019579m.g Citrus clementina HOM05D003486 ORTHO05D004600 2.9e-11 72.4 115 37.4
RcHm_v2.0_Chr4g0406781 Rosa chinensis HOM05D003486 ORTHO05D004600 2.9e-11 72.4 139 37.4
Actinidia11303 Actinidia chinensis HOM05D003486 ORTHO05D004600 3.8e-11 72.0 111 40.5
Lj6A53G34 Lonicera japonica HOM05D003486 ORTHO05D004600 3.8e-11 72.0 113 37.2
SGA_v2.0_scaffold17G08091 Striga asiatica HOM05D003486 ORTHO05D004600 3.8e-11 72.0 139 37.4
Manes.11G120800 Manihot esculenta HOM05D003486 ORTHO05D004600 5.0e-11 71.6 141 39.7
Glyma.12G052400 Glycine max HOM05D003486 ORTHO05D004600 6.5e-11 71.2 133 39.1
THA.LOC104803678 Tarenaya hassleriana HOM05D003486 ORTHO05D004600 6.5e-11 71.2 115 37.4
AT3G59410 Arabidopsis thaliana HOM05D003486 ORTHO05D004600 8.5e-11 70.9 66 48.5
SalBow3G2610 Salvia bowleyana HOM05D003486 ORTHO05D004600 8.5e-11 70.9 146 37.7
SMO364G0666 Selaginella moellendorffii HOM05D003486 ORTHO05D004600 8.5e-11 70.9 106 37.7
arahy.Tifrunner.gnm1.ann1.NQA14U Arachis hypogaea HOM05D003486 ORTHO05D004600 1.1e-10 70.5 88 46.6
arahy.Tifrunner.gnm1.ann1.Q0VLRE Arachis hypogaea HOM05D003486 ORTHO05D004600 1.1e-10 70.5 88 46.6
ECA240G0242 Erigeron canadensis HOM05D003486 ORTHO05D004600 1.1e-10 70.5 67 49.3
ATR0824G223 Amborella trichopoda HOM05D003486 ORTHO05D004600 1.5e-10 70.1 146 36.3
Oeu061594.1 Olea europaea HOM05D003486 ORTHO05D004600 1.5e-10 70.1 141 34.8
TPR.G34255 Trifolium pratense HOM05D003486 ORTHO05D004600 1.5e-10 70.1 143 37.1
EL10Ac8g18701 Beta vulgaris HOM05D003486 ORTHO05D021574 1.9e-10 69.7 93 36.6
Gohir.A10G137350 Gossypium hirsutum HOM05D003486 ORTHO05D004600 1.9e-10 69.7 138 38.4
Gohir.D10G129301 Gossypium hirsutum HOM05D003486 ORTHO05D004600 1.9e-10 69.7 138 38.4
Gorai.011G142600 Gossypium raimondii HOM05D003486 ORTHO05D004600 1.9e-10 69.7 138 38.4
MD04G1040400 Malus domestica HOM05D003486 ORTHO05D004600 1.9e-10 69.7 139 36.7
Nn1g09603 Nelumbo nucifera HOM05D003486 ORTHO05D004600 1.9e-10 69.7 113 38.9
Dinv17546 Davidia involucrata HOM05D003486 ORTHO05D004600 2.5e-10 69.3 101 38.6
Thhalv10005755m.g Eutrema salsugineum HOM05D003486 ORTHO05D004600 2.5e-10 69.3 65 49.2
Sp5g03730 Schrenkiella parvula HOM05D003486 ORTHO05D004600 2.5e-10 69.3 65 49.2
Thecc.04G179700 Theobroma cacao HOM05D003486 ORTHO05D004600 2.5e-10 69.3 138 36.2
BcaC07g40280 Brassica carinata HOM05D003486 ORTHO05D004600 3.2e-10 68.9 116 38.8
C08p34420 Brassica napus HOM05D003486 ORTHO05D004600 3.2e-10 68.9 116 38.8
BcaC07g40457 Brassica carinata HOM05D003486 ORTHO05D004600 4.2e-10 68.6 65 49.2
FvH4_4g10800 Fragaria vesca HOM05D003486 ORTHO05D004600 4.2e-10 68.6 140 37.1
FAN12G3204 Fragaria x ananassa HOM05D003486 ORTHO05D004600 4.2e-10 68.6 140 37.1
FAN17G1210 Fragaria x ananassa HOM05D003486 ORTHO05D004600 4.2e-10 68.6 140 37.1
PSO017G7170 Papaver somniferum HOM05D003486 ORTHO05D004600 4.2e-10 68.6 71 47.9
PSO675G4708 Papaver somniferum HOM05D003486 ORTHO05D004600 4.2e-10 68.6 71 47.9
Carub.0005s2615 Capsella rubella HOM05D003486 ORTHO05D004600 5.5e-10 68.2 65 47.7
CARHR169800 Cardamine hirsuta HOM05D003486 ORTHO05D004600 7.2e-10 67.8 65 47.7
CDE02G1871 Ceratophyllum demersum HOM05D003486 ORTHO05D004600 7.2e-10 67.8 117 38.5
Cc07_g19140 Coffea canephora HOM05D000246 ORTHO05D004600 7.2e-10 67.8 97 38.1
A09p51690 Brassica napus HOM05D003486 ORTHO05D004600 9.4e-10 67.4 116 37.9
Dinv15708 Davidia involucrata HOM05D003486 ORTHO05D004600 9.4e-10 67.4 99 38.4
Mapoly0088s0047 Marchantia polymorpha HOM05D003486 ORTHO05D004600 9.4e-10 67.4 90 43.3
MELO3C011660.2 Cucumis melo HOM05D003486 ORTHO05D004600 1.2e-09 67.0 144 38.2
CsaV3_6G003940 Cucumis sativus L. HOM05D003486 ORTHO05D004600 1.2e-09 67.0 153 36.6
Sopen11g020460 Solanum pennellii HOM05D003486 ORTHO05D004600 1.2e-09 67.0 147 32.0
Aqoxy2G04161 Aquilegia oxysepala HOM05D003486 ORTHO05D004600 2.7e-09 65.9 67 47.8
Pp3c26_5370 Physcomitrium patens HOM05D003486 ORTHO05D004600 3.6e-09 65.5 113 38.1
Cre01.g038000 Chlamydomonas reinhardtii HOM05D003486 ORTHO05D004600 4.7e-09 65.1 68 44.1
Aa31LG10G13760 Aethionema arabicum HOM05D003486 ORTHO05D004600 6.1e-09 64.7 140 35.0
BcaC02g10121 Brassica carinata HOM05D003486 ORTHO05D004600 6.1e-09 64.7 114 34.2
TPR.G8787 Trifolium pratense HOM05D003486 ORTHO05D004600 6.1e-09 64.7 101 39.6
Cc00_g29260 Coffea canephora HOM05D003486 ORTHO05D004600 1.8e-08 63.2 110 36.4
MCO05G349 Micromonas commoda HOM05D003486 ORTHO05D004600 2.3e-08 62.8 70 45.7
EL10Ac2g04155 Beta vulgaris HOM05D003486 ORTHO05D004600 8.8e-08 60.8 109 34.9
Solyc03g059250.3 Solanum lycopersicum HOM05D000738 ORTHO05D000675 2.6e-07 59.3 64 42.2
Sopen03g013600 Solanum pennellii HOM05D000738 ORTHO05D000675 2.6e-07 59.3 64 42.2
BolC8t51043H Brassica oleracea HOM05D003486 ORTHO05D004600 3.3e-07 58.9 142 32.4
Cc07_g19100 Coffea canephora HOM05D003486 ORTHO05D004600 3.3e-07 58.9 99 32.3
AL5G41310 Arabidopsis lyrata HOM05D003486 ORTHO05D004600 9.7e-07 57.4 97 34.0
BraA09t40605Z Brassica rapa HOM05D003486 ORTHO05D004600 9.7e-07 57.4 142 31.7
FvH4_1g14230 Fragaria vesca HOM05D000084 ORTHO05D021574 9.7e-07 57.4 129 34.9
PRCOL_00004354 Prasinoderma coloniale HOM05D003486 ORTHO05D004600 1.3e-06 57.0 87 35.6
RcHm_v2.0_Chr2g0102471 Rosa chinensis HOM05D003486 ORTHO05D021574 1.3e-06 57.0 130 35.4
PGSC0003DMG400033929 Solanum tuberosum HOM05D000738 ORTHO05D000675 2.2e-06 56.2 64 40.6
QL04p017669 Quercus lobata HOM05D003486 ORTHO05D004600 2.8e-06 55.8 100 32.0
PRCOL_00004602 Prasinoderma coloniale HOM05D003486 ORTHO05D011329 8.2e-06 54.3 71 39.4


User provided reference genes

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