Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.06g193510 Amaranthus hybridus HOM05D007940 ORTHO05D010046 5.3e-50 200.7 98 100.0
EL10Ac4g10315 Beta vulgaris HOM05D007940 ORTHO05D010046 1.2e-33 146.4 85 80.0
Sabra15G0137900 Salix brachista HOM05D007940 ORTHO05D010046 5.7e-28 127.5 79 69.6
Potri.015G121500 Populus trichocarpa HOM05D007940 ORTHO05D010046 9.7e-28 126.7 79 68.4
Nn7g38154 Nelumbo nucifera HOM05D007940 ORTHO05D010046 1.7e-27 125.9 86 66.3
Sc16g0011710 Simmondsia chinensis HOM05D007940 ORTHO05D010046 1.7e-27 125.9 86 70.9
Migut.M01978 Erythranthe guttata HOM05D007940 ORTHO05D010046 6.3e-27 124.0 82 65.9
Prupe.4G111600 Prunus persica HOM05D007940 ORTHO05D010046 8.2e-27 123.6 79 69.6
ClCG01G009440 Citrullus lanatus HOM05D007940 ORTHO05D010046 1.8e-26 122.5 82 67.1
Atru.chr10.309 Acer truncatum HOM05D007940 ORTHO05D010046 3.1e-26 121.7 81 66.7
Thecc.06G142100 Theobroma cacao HOM05D007940 ORTHO05D010046 4.1e-26 121.3 82 67.1
CSS0023427 Camellia sinensis var. sinensis HOM05D007940 ORTHO05D010046 5.3e-26 120.9 77 70.1
QL11p017779 Quercus lobata HOM05D007940 ORTHO05D010046 5.3e-26 120.9 80 68.8
Duzib235G0199 Durio zibethinus HOM05D007940 ORTHO05D010046 1.2e-25 119.8 82 68.3
Aa31LG2G15120 Aethionema arabicum HOM05D007940 ORTHO05D010046 1.5e-25 119.4 79 65.8
Eucgr.D01043 Eucalyptus grandis HOM05D007940 ORTHO05D010046 1.5e-25 119.4 82 64.6
Manes.16G056500 Manihot esculenta HOM05D007940 ORTHO05D010046 1.5e-25 119.4 81 64.2
Manes.16G057400 Manihot esculenta HOM05D007940 ORTHO05D010046 1.5e-25 119.4 81 64.2
FAN16G1222 Fragaria x ananassa HOM05D007940 ORTHO05D010046 2.0e-25 119.0 82 65.9
SGA_v2.0_scaffold298G47684 Striga asiatica HOM05D007940 ORTHO05D010046 2.0e-25 119.0 82 62.2
A09p35060 Brassica napus HOM05D007940 ORTHO05D010046 2.6e-25 118.6 86 58.1
BraA09t39037Z Brassica rapa HOM05D007940 ORTHO05D010046 2.6e-25 118.6 86 58.1
Carub.0001s2958 Capsella rubella HOM05D007940 ORTHO05D010046 2.6e-25 118.6 79 64.6
MELO3C021755.2 Cucumis melo HOM05D007940 ORTHO05D010046 2.6e-25 118.6 80 65.0
RcHm_v2.0_Chr5g0020061 Rosa chinensis HOM05D007940 ORTHO05D010046 2.6e-25 118.6 82 63.4
Actinidia33707 Actinidia chinensis HOM05D007940 ORTHO05D010046 3.5e-25 118.2 85 61.2
BcaB07g32779 Brassica carinata HOM05D007940 ORTHO05D010046 3.5e-25 118.2 83 61.4
AL1G49310 Arabidopsis lyrata HOM05D007940 ORTHO05D010046 5.9e-25 117.5 79 64.6
MD10G1233500 Malus domestica HOM05D007940 ORTHO05D010046 5.9e-25 117.5 83 63.9
Oeu008726.1 Olea europaea HOM05D007940 ORTHO05D010046 5.9e-25 117.5 86 65.1
AT1G31175 Arabidopsis thaliana HOM05D007940 ORTHO05D010046 7.7e-25 117.1 85 60.0
Hma1.2p1_0040F.1_g025155 Hydrangea macrophylla HOM05D007940 ORTHO05D010046 1.7e-24 115.9 81 63.0
Lalb_Chr07g0188831 Lupinus albus HOM05D007940 ORTHO05D010046 1.7e-24 115.9 81 66.7
TWI38G0312 Tripterygium wilfordii HOM05D007940 ORTHO05D010046 1.7e-24 115.9 84 61.9
BcaC05g27148 Brassica carinata HOM05D007940 ORTHO05D010046 2.2e-24 115.5 81 61.7
BcaC09g51575 Brassica carinata HOM05D007940 ORTHO05D010046 2.2e-24 115.5 81 61.7
BolC1t01151H Brassica oleracea HOM05D007940 ORTHO05D010046 2.2e-24 115.5 81 61.7
Thhalv10009859m.g Eutrema salsugineum HOM05D007940 ORTHO05D010046 2.2e-24 115.5 79 63.3
Cc09_g06150 Coffea canephora HOM05D007940 ORTHO05D010046 2.9e-24 115.2 82 58.5
MD05G1252500 Malus domestica HOM05D007940 ORTHO05D010046 3.8e-24 114.8 79 64.6
DCAR_003782 Daucus carota HOM05D007940 ORTHO05D010046 6.5e-24 114.0 90 60.0
Sp1g27000 Schrenkiella parvula HOM05D007940 ORTHO05D010046 6.5e-24 114.0 79 62.0
Sed0008509 Sechium edule HOM05D007940 ORTHO05D010046 6.5e-24 114.0 83 59.0
SalBow6G6284 Salvia bowleyana HOM05D007940 ORTHO05D010046 1.1e-23 113.2 82 58.5
SalBow8G3130 Salvia bowleyana HOM05D007940 ORTHO05D010046 1.1e-23 113.2 82 58.5
Cfa019394 Carpinus fangiana HOM05D007940 ORTHO05D010046 2.5e-23 112.1 80 62.5
Phvul.009G252500 Phaseolus vulgaris HOM05D007940 ORTHO05D010046 2.5e-23 112.1 79 62.0
Solyc11g020710.2 Solanum lycopersicum HOM05D007940 ORTHO05D010046 2.5e-23 112.1 87 58.6
Sopen11g010730 Solanum pennellii HOM05D007940 ORTHO05D010046 2.5e-23 112.1 87 58.6
THA.LOC104798551 Tarenaya hassleriana HOM05D007940 ORTHO05D010046 2.5e-23 112.1 81 61.7
FAN21G0368 Fragaria x ananassa HOM05D007940 ORTHO05D010046 3.2e-23 111.7 82 64.6
Medtr2g435250 Medicago truncatula HOM05D007940 ORTHO05D010046 5.5e-23 110.9 86 59.3
CARHR030670 Cardamine hirsuta HOM05D007940 ORTHO05D010046 9.4e-23 110.2 92 54.3
Ca_01891_v3 Cicer arietinum L. HOM05D007940 ORTHO05D010046 9.4e-23 110.2 78 62.8
Psat1g156840 Pisum sativum HOM05D007940 ORTHO05D010046 1.6e-22 109.4 78 60.3
Glyma.15G146300 Glycine max HOM05D007940 ORTHO05D010046 4.7e-22 107.8 79 60.8
Lsat_1_v5_gn_5_23140 Lactuca sativa HOM05D007940 ORTHO05D010046 4.7e-22 107.8 79 58.2
TPR.G22024 Trifolium pratense HOM05D007940 ORTHO05D010046 4.7e-22 107.8 86 58.1
CANSAT35G1488 Cannabis sativa HOM05D007940 ORTHO05D010046 1.4e-21 106.3 91 56.0
HanXRQChr04g0109371 Helianthus annuus HOM05D007940 ORTHO05D010046 5.2e-21 104.4 79 54.4
Aqoxy3G00719 Aquilegia oxysepala HOM05D007940 ORTHO05D010046 1.1e-20 103.2 79 58.2
Gohir.D05G147600 Gossypium hirsutum HOM05D007940 ORTHO05D010046 1.7e-19 99.4 82 58.5
COL.COLO4_30989 Corchorus olitorius HOM05D007940 ORTHO05D010046 3.7e-19 98.2 83 57.8
HPP92_017565 Vanilla planifolia HOM05D007940 ORTHO05D010046 6.3e-19 97.4 79 57.0
Gohir.D05G147732 Gossypium hirsutum HOM05D007940 ORTHO05D010046 3.1e-18 95.1 94 53.2
Gorai.009G151700 Gossypium raimondii HOM05D007940 ORTHO05D010046 3.1e-18 95.1 94 53.2
Os07g0567500 Oryza sativa ssp. japonica HOM05D007940 ORTHO05D010046 4.1e-18 94.7 82 54.9
Ciclev10017318m.g Citrus clementina HOM05D007940 ORTHO05D010046 4.5e-17 91.3 82 53.7
MBI02_g13338_MAGBIO Magnolia biondii HOM05D007940 ORTHO05D010046 7.7e-17 90.5 72 62.5
Zm00001eb107160 Zea mays HOM05D007940 ORTHO05D010046 1.7e-16 89.4 82 48.8
PSO675G1966 Papaver somniferum HOM05D007940 ORTHO05D010046 5.5e-15 84.3 55 67.3
TAR624G1282 Trochodendron aralioides HOM05D007940 ORTHO05D010046 6.8e-13 77.4 50 64.0
CsaV3_1G046330 Cucumis sativus L. HOM05D007940 ORTHO05D010046 4.4e-12 74.7 51 56.9
SMO347G0336 Selaginella moellendorffii HOM05D007940 ORTHO05D010046 5.0e-08 61.2 79 34.2


User provided reference genes

Program Settings