Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.06g192450 Amaranthus hybridus HOM05D004696 ORTHO05D005645 1.0e-117 426.8 218 100.0
Ah.16g105210 Amaranthus hybridus HOM05D004696 ORTHO05D005645 1.7e-104 382.9 218 88.5
EL10Ac4g08571 Beta vulgaris HOM05D004696 ORTHO05D005645 1.2e-83 313.5 213 77.0
AUR62020507 Chenopodium quinoa HOM05D004696 ORTHO05D005645 8.4e-80 300.8 210 72.9
Dinv29511 Davidia involucrata HOM05D004696 ORTHO05D005645 1.4e-74 283.5 199 69.3
Atru.chr4.3144 Acer truncatum HOM05D004696 ORTHO05D005645 2.6e-73 279.3 195 69.2
TAR629G2307 Trochodendron aralioides HOM05D004696 ORTHO05D005645 4.4e-73 278.5 198 71.2
Sc17g0002920 Simmondsia chinensis HOM05D004696 ORTHO05D005645 1.7e-72 276.6 200 70.0
Manes.11G020900 Manihot esculenta HOM05D004696 ORTHO05D005645 3.8e-72 275.4 198 68.2
Ciclev10005920m.g Citrus clementina HOM05D004696 ORTHO05D005645 1.1e-71 273.9 200 64.5
Eucgr.B03956 Eucalyptus grandis HOM05D004696 ORTHO05D005645 3.2e-71 272.3 198 67.2
Manes.03G211700 Manihot esculenta HOM05D004696 ORTHO05D005645 4.2e-71 271.9 198 67.2
CsaV3_6G008150 Cucumis sativus L. HOM05D004696 ORTHO05D005645 9.3e-71 270.8 201 67.7
Dinv18020 Davidia involucrata HOM05D004696 ORTHO05D005645 9.3e-71 270.8 198 67.2
Cpa.g.sc146.25 Carica papaya HOM05D004696 ORTHO05D005645 1.6e-70 270.0 199 66.3
TWI73G0566 Tripterygium wilfordii HOM05D004696 ORTHO05D005645 1.6e-70 270.0 199 66.3
Thecc.04G312600 Theobroma cacao HOM05D004696 ORTHO05D005645 2.1e-70 269.6 199 65.8
Lsat_1_v5_gn_1_39920 Lactuca sativa HOM05D004696 ORTHO05D005645 6.0e-70 268.1 198 65.7
GSVIVG01017685001 Vitis vinifera HOM05D004696 ORTHO05D005645 7.8e-70 267.7 200 67.0
Duzib151G0078 Durio zibethinus HOM05D004696 ORTHO05D005645 2.3e-69 266.2 199 67.3
Lj2g0021207 Lotus japonicus HOM05D004696 ORTHO05D005645 3.0e-69 265.8 198 64.6
HanXRQChr09g0238571 Helianthus annuus HOM05D004696 ORTHO05D005645 3.9e-69 265.4 198 65.2
Lsat_1_v5_gn_6_92581 Lactuca sativa HOM05D004696 ORTHO05D005645 3.9e-69 265.4 198 64.1
PGR031G3538 Punica granatum HOM05D004696 ORTHO05D005645 6.6e-69 264.6 199 64.3
Cfa015727 Carpinus fangiana HOM05D004696 ORTHO05D005645 8.7e-69 264.2 198 64.1
AUR62015697 Chenopodium quinoa HOM05D004696 ORTHO05D005645 1.1e-68 263.8 179 73.7
CSS0007787 Camellia sinensis var. sinensis HOM05D004696 ORTHO05D005645 1.9e-68 263.1 202 65.3
vmacro08011 Vaccinium macrocarpon HOM05D004696 ORTHO05D005645 2.5e-68 262.7 210 62.9
QL06p014174 Quercus lobata HOM05D004696 ORTHO05D005645 3.3e-68 262.3 208 62.5
Aqoxy4G02417 Aquilegia oxysepala HOM05D004696 ORTHO05D005645 4.3e-68 261.9 197 65.5
CiPaw.02G069300 Carya illinoinensis HOM05D004696 ORTHO05D005645 4.3e-68 261.9 198 63.6
TWI09G0971 Tripterygium wilfordii HOM05D004696 ORTHO05D005645 4.3e-68 261.9 199 63.8
Actinidia22921 Actinidia chinensis HOM05D004696 ORTHO05D005645 5.6e-68 261.5 198 64.1
Sed0019137 Sechium edule HOM05D004696 ORTHO05D005645 5.6e-68 261.5 197 64.0
Gorai.005G071900 Gossypium raimondii HOM05D004696 ORTHO05D005645 7.3e-68 261.2 203 63.5
Lj4g0004970 Lotus japonicus HOM05D004696 ORTHO05D005645 7.3e-68 261.2 198 63.1
CAN.G305.38 Capsicum annuum HOM05D004696 ORTHO05D005645 2.1e-67 259.6 198 62.6
Lalb_Chr10g0096421 Lupinus albus HOM05D004696 ORTHO05D005645 2.1e-67 259.6 197 62.9
Lalb_Chr17g0338851 Lupinus albus HOM05D004696 ORTHO05D005645 2.1e-67 259.6 197 61.4
Solyc05g053220.3 Solanum lycopersicum HOM05D004696 ORTHO05D005645 2.1e-67 259.6 198 62.1
Sopen05g031730 Solanum pennellii HOM05D004696 ORTHO05D005645 2.1e-67 259.6 198 62.1
VMungo0331G1167 Vigna mungo HOM05D004696 ORTHO05D005645 2.1e-67 259.6 199 63.3
Gohir.A02G058200 Gossypium hirsutum HOM05D004696 ORTHO05D005645 2.8e-67 259.2 203 63.5
Haze_00771 Corylus avellana HOM05D004696 ORTHO05D005645 3.6e-67 258.8 198 62.6
Phvul.010G140500 Phaseolus vulgaris HOM05D004696 ORTHO05D005645 3.6e-67 258.8 199 63.8
Phvul.003G045400 Phaseolus vulgaris HOM05D004696 ORTHO05D005645 6.2e-67 258.1 197 62.9
MD13G1140700 Malus domestica HOM05D004696 ORTHO05D005645 8.1e-67 257.7 198 63.6
Glyma.11G024900 Glycine max HOM05D004696 ORTHO05D005645 1.1e-66 257.3 198 63.6
PGSC0003DMG400027150 Solanum tuberosum HOM05D004696 ORTHO05D005645 1.8e-66 256.5 198 61.1
Gohir.D02G064000 Gossypium hirsutum HOM05D004696 ORTHO05D005645 2.4e-66 256.1 203 62.6
MD16G1136700 Malus domestica HOM05D004696 ORTHO05D005645 2.4e-66 256.1 198 62.6
Aqoxy5G04183 Aquilegia oxysepala HOM05D004696 ORTHO05D005645 3.1e-66 255.8 197 63.5
Glyma.01G218300 Glycine max HOM05D004696 ORTHO05D005645 4.0e-66 255.4 197 61.9
MD07G1065600 Malus domestica HOM05D004696 ORTHO05D005645 6.9e-66 254.6 198 62.6
Sabra02G0114900 Salix brachista HOM05D004696 ORTHO05D005645 7.6e-65 251.1 194 64.4
Medtr5g081850 Medicago truncatula HOM05D004696 ORTHO05D005645 1.3e-64 250.4 199 62.3
Potri.008G206400 Populus trichocarpa HOM05D004696 ORTHO05D005645 1.3e-64 250.4 194 63.9
Prupe.1G105700 Prunus persica HOM05D004696 ORTHO05D005645 1.7e-64 250.0 199 62.3
CANSAT78G0332 Cannabis sativa HOM05D004696 ORTHO05D005645 3.8e-64 248.8 204 60.8
Potri.010G002100 Populus trichocarpa HOM05D004696 ORTHO05D005645 3.8e-64 248.8 193 63.7
arahy.Tifrunner.gnm1.ann1.61U0KE Arachis hypogaea HOM05D004696 ORTHO05D005645 4.9e-64 248.4 208 61.5
Psat7g133720 Pisum sativum HOM05D004696 ORTHO05D005645 1.4e-63 246.9 199 61.8
Psat1g042400 Pisum sativum HOM05D004696 ORTHO05D005645 1.9e-63 246.5 199 60.8
RcHm_v2.0_Chr4g0427441 Rosa chinensis HOM05D004696 ORTHO05D005645 2.4e-63 246.1 198 60.6
THA.LOC104827108 Tarenaya hassleriana HOM05D004696 ORTHO05D005645 2.4e-63 246.1 195 61.5
Glyma.14G125600 Glycine max HOM05D004696 ORTHO05D005645 4.2e-63 245.4 189 61.4
FvH4_4g21490 Fragaria vesca HOM05D004696 ORTHO05D005645 2.1e-62 243.0 198 61.1
arahy.Tifrunner.gnm1.ann1.BY2PXQ Arachis hypogaea HOM05D004696 ORTHO05D005645 2.7e-62 242.7 208 59.6
arahy.Tifrunner.gnm1.ann1.NQRV37 Arachis hypogaea HOM05D004696 ORTHO05D005645 2.7e-62 242.7 208 60.1
FAN07G1680 Fragaria x ananassa HOM05D004696 ORTHO05D005645 3.5e-62 242.3 198 60.6
FAN12G0616 Fragaria x ananassa HOM05D004696 ORTHO05D005645 3.5e-62 242.3 198 61.1
MSTRG.24614 Avicennia marina HOM05D004696 ORTHO05D005645 6.0e-62 241.5 194 64.9
Migut.N00002 Erythranthe guttata HOM05D004696 ORTHO05D005645 6.0e-62 241.5 198 62.1
CDE06G2579 Ceratophyllum demersum HOM05D005139 ORTHO05D006125 1.0e-61 240.7 195 60.5
Sabra08G0150400 Salix brachista HOM05D004696 ORTHO05D005645 1.3e-61 240.4 214 58.4
Cc00_g15640 Coffea canephora HOM05D004696 ORTHO05D005645 2.3e-61 239.6 217 57.1
Cc03_g00150 Coffea canephora HOM05D004696 ORTHO05D005645 3.9e-61 238.8 210 60.0
MBI03_g01483_MAGBIO Magnolia biondii HOM05D004696 ORTHO05D005645 6.7e-61 238.0 186 62.4
Sabra02G0116500 Salix brachista HOM05D004696 ORTHO05D005645 1.9e-60 236.5 214 58.9
ECA220G0002 Erigeron canadensis HOM05D004696 ORTHO05D005645 2.5e-60 236.1 185 62.2
TPR.G8061 Trifolium pratense HOM05D004696 ORTHO05D005645 4.3e-60 235.3 200 59.0
Os02g0730500 Oryza sativa ssp. japonica HOM05D004696 ORTHO05D005645 5.6e-60 235.0 197 58.4
unitig_8.g2889 Utricularia gibba HOM05D004696 ORTHO05D005645 7.4e-60 234.6 187 60.4
Zm00001eb189970 Zea mays HOM05D004696 ORTHO05D005645 1.8e-58 229.9 197 57.9
Oeu022705.1 Olea europaea HOM05D004696 ORTHO05D005645 5.3e-58 228.4 204 58.3
SalBow2G0725 Salvia bowleyana HOM05D001196 ORTHO05D005911 5.8e-57 224.9 201 58.7
Aqoxy3G02973 Aquilegia oxysepala HOM05D004696 ORTHO05D005645 1.3e-56 223.8 189 63.0
SGA_v2.0_scaffold49G18399 Striga asiatica HOM05D004696 ORTHO05D005645 2.9e-56 222.6 198 58.1
AT5G30495 Arabidopsis thaliana HOM05D004696 ORTHO05D005645 1.9e-55 219.9 198 55.1
Lj6C700T16 Lonicera japonica HOM05D004696 ORTHO05D005645 2.4e-55 219.5 198 56.1
Oeu037627.2 Olea europaea HOM05D004696 ORTHO05D005645 3.2e-55 219.2 299 44.1
BcaB04g19639 Brassica carinata HOM05D004696 ORTHO05D005645 5.5e-55 218.4 194 55.7
PSO832G1751 Papaver somniferum HOM05D004696 ORTHO05D005645 5.5e-55 218.4 200 56.5
AL6G41010 Arabidopsis lyrata HOM05D004696 ORTHO05D005645 9.3e-55 217.6 198 55.1
PSO063G5897 Papaver somniferum HOM05D004696 ORTHO05D005645 9.3e-55 217.6 197 56.3
Hma1.2p1_2234F.1_g317690 Hydrangea macrophylla HOM05D004696 ORTHO05D000003 1.6e-54 216.9 261 47.1
Nitab4.5_0008086g0030 Nicotiana tabacum HOM05D004696 ORTHO05D005645 2.1e-54 216.5 200 58.0
PSO782G4648 Papaver somniferum HOM05D004696 ORTHO05D005645 6.0e-54 214.9 190 55.8
PSO478G3068 Papaver somniferum HOM05D004696 ORTHO05D005645 7.9e-54 214.5 190 55.8
CARHR185500 Cardamine hirsuta HOM05D004696 ORTHO05D005645 5.1e-53 211.8 194 52.6
BcaC04g23715 Brassica carinata HOM05D004696 ORTHO05D005645 8.7e-53 211.1 198 53.5
Sp2g19960 Schrenkiella parvula HOM05D004696 ORTHO05D005645 1.9e-52 209.9 198 53.0
Carub.0002s0865 Capsella rubella HOM05D004696 ORTHO05D005645 7.4e-52 208.0 192 53.6
Aa31LG2G12130 Aethionema arabicum HOM05D004696 ORTHO05D005645 2.8e-51 206.1 198 53.0
ClCG06G002080 Citrullus lanatus HOM05D004696 ORTHO05D005645 4.8e-51 205.3 200 55.5
Rhsim04G0248200 Rhododendron simsii HOM05D004696 ORTHO05D005645 8.1e-51 204.5 202 52.5
A09p05040 Brassica napus HOM05D004696 ORTHO05D005645 2.4e-50 203.0 198 53.5
BraA09t36143Z Brassica rapa HOM05D004696 ORTHO05D005645 2.4e-50 203.0 198 53.5
Peaxi162Scf00164g00414 Petunia axillaris HOM05D004696 ORTHO05D005645 6.9e-50 201.4 198 52.0
AT1G54770 Arabidopsis thaliana HOM05D004696 ORTHO05D005645 1.2e-49 200.7 200 54.5
C09p05450 Brassica napus HOM05D004696 ORTHO05D005645 1.5e-49 200.3 198 52.5
BolC9t53474H Brassica oleracea HOM05D004696 ORTHO05D005645 4.5e-49 198.7 198 52.0
arahy.Tifrunner.gnm1.ann1.09FGJA Arachis hypogaea HOM05D004696 ORTHO05D005645 1.3e-48 197.2 199 53.8
Thhalv10005420m.g Eutrema salsugineum HOM05D004696 ORTHO05D005645 2.9e-48 196.1 199 52.3
Ca_05928_v3 Cicer arietinum L. HOM05D004696 ORTHO05D005645 4.2e-47 192.2 199 50.8
Ca_06214_v3 Cicer arietinum L. HOM05D004696 ORTHO05D005645 5.5e-47 191.8 203 49.8
ECA248G3148 Erigeron canadensis HOM05D004696 ORTHO05D005645 1.8e-45 186.8 187 54.0
SGA_v2.0_scaffold69G23291 Striga asiatica HOM05D004696 ORTHO05D005645 1.5e-44 183.7 198 51.5
Nitab4.5_0000745g0120 Nicotiana tabacum HOM05D004696 ORTHO05D005645 1.9e-44 183.3 200 51.0
SHI04008 Sapria himalayana HOM05D004696 ORTHO05D005645 1.9e-44 183.3 162 57.4
Actinidia01063 Actinidia chinensis HOM05D004696 ORTHO05D005645 2.5e-44 183.0 199 49.7
Mapoly0084s0020 Marchantia polymorpha HOM05D004696 ORTHO05D005645 2.1e-43 179.9 174 52.3
Pp3c7_450 Physcomitrium patens HOM05D004696 ORTHO05D005645 8.2e-43 177.9 175 54.3
SEGI_16783 Sequoiadendron giganteum HOM05D004696 ORTHO05D005645 6.9e-42 174.9 171 54.4
SEGI_41631 Sequoiadendron giganteum HOM05D004696 ORTHO05D005645 1.2e-41 174.1 183 51.4
SMO139G0013 Selaginella moellendorffii HOM05D004696 ORTHO05D005645 2.7e-38 162.9 179 48.6
MELO3C035238.2 Cucumis melo HOM05D004696 ORTHO05D005645 3.6e-38 162.5 170 52.4
Nn3g16891 Nelumbo nucifera HOM05D004696 ORTHO05D005645 3.6e-38 162.5 128 57.8
Lj4g0014561 Lotus japonicus HOM05D004696 ORTHO05D005645 6.9e-34 148.3 100 72.0
CBR_g41139 Chara braunii HOM05D004696 ORTHO05D005645 4.5e-33 145.6 132 48.5
Lj4g0016234 Lotus japonicus HOM05D004696 ORTHO05D005645 7.7e-33 144.8 96 72.9
ECA149G0001 Erigeron canadensis HOM05D004696 ORTHO05D005645 5.0e-32 142.1 187 44.9
ATR1127G170 Amborella trichopoda HOM05D004696 ORTHO05D005645 5.1e-29 132.1 133 53.4
AagrBONN_evm.TU.Sc2ySwM_368.1627 Anthoceros agrestis HOM05D004696 ORTHO05D005645 9.7e-28 127.9 112 56.2
Zm00001eb253530 Zea mays HOM05D004696 ORTHO05D005645 3.7e-27 125.9 99 63.6
HPP92_006011 Vanilla planifolia HOM05D004696 ORTHO05D005645 4.1e-26 122.5 124 46.0
RcHm_v2.0_Chr4g0427481 Rosa chinensis HOM05D004696 ORTHO05D005645 5.3e-26 122.1 103 54.4
MCO05G434 Micromonas commoda HOM05D004696 ORTHO05D005645 4.5e-25 119.0 157 40.8
TAR371G0358 Trochodendron aralioides HOM05D004696 ORTHO05D005645 4.7e-22 109.0 103 58.3
Lj2g0010517 Lotus japonicus HOM05D004696 ORTHO05D005645 6.1e-22 108.6 129 50.4
CSS0046364 Camellia sinensis var. sinensis HOM05D004696 ORTHO05D005645 1.4e-21 107.5 103 52.4
PRCOL_00000839 Prasinoderma coloniale HOM05D004696 ORTHO05D005645 1.8e-21 107.1 110 51.8
COL.COLO4_34519 Corchorus olitorius HOM05D004696 ORTHO05D005645 2.3e-21 106.7 117 49.6
CSS0022818 Camellia sinensis var. sinensis HOM05D004696 ORTHO05D005645 4.4e-20 102.4 102 51.0
BcaC04g19932 Brassica carinata HOM05D004696 ORTHO05D005645 9.7e-20 101.3 118 47.5
BolC9t57816H Brassica oleracea HOM05D004696 ORTHO05D005645 1.3e-19 100.9 118 48.3
Lj2g0009432 Lotus japonicus HOM05D004696 ORTHO05D005645 1.7e-19 100.5 97 56.7
Cfa024688 Carpinus fangiana HOM05D004696 ORTHO05D005645 4.8e-19 99.0 113 46.0
Cre03.g194150 Chlamydomonas reinhardtii HOM05D004696 ORTHO05D005645 8.5e-16 88.2 177 32.8
Zm00001eb026470 Zea mays HOM05D004696 ORTHO05D021106 2.3e-13 80.1 65 60.0
BcaB05g22696 Brassica carinata HOM05D004696 ORTHO05D005645 9.7e-12 74.7 135 38.5
EL10Ac1g01076 Beta vulgaris HOM05D004696 ORTHO05D005645 1.3e-11 74.3 57 71.9
Zm00001eb219180 Zea mays HOM05D004696 ORTHO05D005645 3.7e-11 72.8 65 56.9
Aqoxy5G04095 Aquilegia oxysepala HOM05D004696 ORTHO05D005645 4.8e-11 72.4 101 45.5
QL12p004065 Quercus lobata HOM05D004696 ORTHO05D005645 5.3e-10 68.9 66 59.1
QL04p080373 Quercus lobata HOM05D000023 ORTHO05D000014 2.0e-09 67.0 45 68.9
Medtr7g074130 Medicago truncatula HOM05D004696 ORTHO05D005645 1.6e-06 57.4 61 50.8
CSS0030909 Camellia sinensis var. sinensis HOM05D004696 ORTHO05D005645 6.1e-06 55.5 103 35.9


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