Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.06g191630 Amaranthus hybridus HOM05D006811 ORTHO05D008419 8.4e-174 613.6 313 100.0
EL10Ac4g08932 Beta vulgaris HOM05D006811 ORTHO05D008419 6.3e-121 438.0 411 57.9
Hund22201 Selenicereus undatus HOM05D006811 ORTHO05D008419 6.7e-115 417.9 416 54.8
AUR62003402 Chenopodium quinoa HOM05D006811 ORTHO05D008419 2.8e-113 412.5 378 58.7
AUR62004775 Chenopodium quinoa HOM05D006811 ORTHO05D008419 3.5e-111 405.6 367 59.4
Sc06g0003070 Simmondsia chinensis HOM05D006811 ORTHO05D008419 2.0e-95 353.2 392 49.2
CsaV3_4G000630 Cucumis sativus L. HOM05D006811 ORTHO05D008419 1.2e-87 327.4 385 46.5
GSVIVG01035212001 Vitis vinifera HOM05D006811 ORTHO05D008419 1.6e-87 327.0 390 45.9
TAR622G1242 Trochodendron aralioides HOM05D006811 ORTHO05D008419 5.9e-87 325.1 388 47.2
Potri.017G139400 Populus trichocarpa HOM05D006811 ORTHO05D008419 1.0e-86 324.3 386 47.4
Peaxi162Scf00713g00019 Petunia axillaris HOM05D006811 ORTHO05D008419 1.3e-86 323.9 389 45.8
Nn4g24731 Nelumbo nucifera HOM05D006811 ORTHO05D008419 2.3e-86 323.2 393 46.1
ClCG10G010680 Citrullus lanatus HOM05D006811 ORTHO05D008419 2.9e-86 322.8 387 45.7
Hma1.2p1_0158F.1_g069620 Hydrangea macrophylla HOM05D006811 ORTHO05D008419 2.9e-86 322.8 399 47.4
MD17G1286700 Malus domestica HOM05D006811 ORTHO05D008419 2.9e-86 322.8 400 44.8
Dinv28246 Davidia involucrata HOM05D006811 ORTHO05D008419 8.6e-86 321.2 387 47.3
Sabra17G0117500 Salix brachista HOM05D006811 ORTHO05D008419 2.5e-85 319.7 387 46.8
Lj6g0026577 Lotus japonicus HOM05D006811 ORTHO05D008419 3.3e-85 319.3 397 45.8
Rhsim10G0185300 Rhododendron simsii HOM05D006811 ORTHO05D008419 3.3e-85 319.3 389 46.8
FAN23G2849 Fragaria x ananassa HOM05D006811 ORTHO05D008419 5.6e-85 318.5 394 45.2
Actinidia40414 Actinidia chinensis HOM05D006811 ORTHO05D008419 7.3e-85 318.2 399 45.9
unitig_0.g2638 Utricularia gibba HOM05D006811 ORTHO05D008419 1.2e-84 317.4 359 46.0
CSS0033706 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 3.6e-84 315.8 388 47.2
Sopen02g025910 Solanum pennellii HOM05D006811 ORTHO05D008419 6.1e-84 315.1 389 44.5
Nitab4.5_0000483g0290 Nicotiana tabacum HOM05D006811 ORTHO05D008419 1.0e-83 314.3 378 45.0
Aa31LG2G2700 Aethionema arabicum HOM05D006811 ORTHO05D008419 1.8e-83 313.5 394 45.4
PGSC0003DMG400016719 Solanum tuberosum HOM05D006811 ORTHO05D008419 3.1e-83 312.8 389 43.7
Migut.K00747 Erythranthe guttata HOM05D006811 ORTHO05D008419 8.9e-83 311.2 385 44.7
Aqoxy3G04154 Aquilegia oxysepala HOM05D006811 ORTHO05D008419 2.0e-82 310.1 398 44.5
RcHm_v2.0_Chr3g0488721 Rosa chinensis HOM05D006811 ORTHO05D008419 2.6e-82 309.7 382 45.3
TPR.G26689 Trifolium pratense HOM05D006811 ORTHO05D008419 3.4e-82 309.3 391 45.5
Nitab4.5_0008137g0060 Nicotiana tabacum HOM05D006811 ORTHO05D008419 4.4e-82 308.9 403 44.2
AT1G65900 Arabidopsis thaliana HOM05D006811 ORTHO05D008419 5.8e-82 308.5 389 46.5
DCAR_020444 Daucus carota HOM05D006811 ORTHO05D008419 7.5e-82 308.1 387 45.0
AL2G23270 Arabidopsis lyrata HOM05D006811 ORTHO05D008419 2.9e-81 306.2 391 46.5
Cfa007746 Carpinus fangiana HOM05D006811 ORTHO05D008419 2.9e-81 306.2 388 44.8
Eucgr.F02911 Eucalyptus grandis HOM05D006811 ORTHO05D008419 4.9e-81 305.4 399 45.4
FvH4_1g27290 Fragaria vesca HOM05D006811 ORTHO05D008419 4.9e-81 305.4 389 44.7
PGR004G2199 Punica granatum HOM05D006811 ORTHO05D008419 4.9e-81 305.4 374 46.5
Glyma.18G043800 Glycine max HOM05D006811 ORTHO05D008419 6.4e-81 305.1 393 43.5
Carub.0002s1184 Capsella rubella HOM05D006811 ORTHO05D008419 1.4e-80 303.9 391 45.8
Glyma.11G212500 Glycine max HOM05D006811 ORTHO05D008419 1.9e-80 303.5 393 43.3
CiPaw.03G075800 Carya illinoinensis HOM05D006811 ORTHO05D008419 5.4e-80 302.0 386 43.8
Medtr3g064600 Medicago truncatula HOM05D006811 ORTHO05D008419 5.4e-80 302.0 393 44.5
VMungo0540G2025 Vigna mungo HOM05D006811 ORTHO05D008419 7.0e-80 301.6 406 41.6
Psat5g142440 Pisum sativum HOM05D006811 ORTHO05D008419 9.2e-80 301.2 391 43.0
Thecc.04G060000 Theobroma cacao HOM05D006811 ORTHO05D008419 9.2e-80 301.2 388 44.1
Ciclev10013413m.g Citrus clementina HOM05D006811 ORTHO05D008419 1.6e-79 300.4 379 44.9
Cc07_g12750 Coffea canephora HOM05D006811 ORTHO05D008419 3.5e-79 299.3 384 44.3
Gorai.008G054100 Gossypium raimondii HOM05D006811 ORTHO05D008419 4.6e-79 298.9 383 43.3
arahy.Tifrunner.gnm1.ann1.A3RENN Arachis hypogaea HOM05D006811 ORTHO05D008419 6.0e-79 298.5 395 42.3
Ca_17071_v3 Cicer arietinum L. HOM05D006811 ORTHO05D008419 7.8e-79 298.1 383 44.4
MSTRG.15636 Avicennia marina HOM05D006811 ORTHO05D008419 1.0e-78 297.7 389 43.2
CANSAT54G1721 Cannabis sativa HOM05D006811 ORTHO05D008419 1.3e-78 297.4 387 44.2
CARHR057790 Cardamine hirsuta HOM05D006811 ORTHO05D008419 1.3e-78 297.4 391 45.0
Lalb_Chr15g0085211 Lupinus albus HOM05D006811 ORTHO05D008419 1.7e-78 297.0 392 43.4
SalBow5G0387 Salvia bowleyana HOM05D006811 ORTHO05D008419 1.7e-78 297.0 391 43.5
Gohir.A12G052300 Gossypium hirsutum HOM05D006811 ORTHO05D008419 8.6e-78 294.7 383 43.1
SalBow5G5201 Salvia bowleyana HOM05D006811 ORTHO05D008419 1.1e-77 294.3 391 43.0
ATR0807G007 Amborella trichopoda HOM05D006811 ORTHO05D008419 2.8e-76 289.7 382 43.2
Thhalv10018647m.g Eutrema salsugineum HOM05D006811 ORTHO05D008419 2.8e-76 289.7 389 44.7
Sp5g20950 Schrenkiella parvula HOM05D006811 ORTHO05D008419 4.7e-76 288.9 389 44.2
HanXRQChr14g0443391 Helianthus annuus HOM05D006811 ORTHO05D008419 5.2e-75 285.4 387 42.9
THA.LOC104825578 Tarenaya hassleriana HOM05D006811 ORTHO05D008419 8.9e-75 284.6 369 44.2
CDE05G3344 Ceratophyllum demersum HOM05D006811 ORTHO05D008419 1.2e-74 284.3 385 43.4
Lsat_1_v5_gn_2_71780 Lactuca sativa HOM05D006811 ORTHO05D008419 2.0e-74 283.5 395 41.3
HanXRQChr12g0365711 Helianthus annuus HOM05D006811 ORTHO05D008419 2.2e-73 280.0 395 41.3
PSO063G4300 Papaver somniferum HOM05D006811 ORTHO05D008419 2.2e-73 280.0 403 42.7
BcaB03g15309 Brassica carinata HOM05D006811 ORTHO05D008419 2.4e-72 276.6 393 42.7
C06p39240 Brassica napus HOM05D006811 ORTHO05D008419 1.5e-69 267.3 389 42.4
BcaC08g46096 Brassica carinata HOM05D006811 ORTHO05D008419 1.9e-69 266.9 389 42.4
A07p33010 Brassica napus HOM05D006811 ORTHO05D008419 1.2e-68 264.2 389 41.9
BraA07t30929Z Brassica rapa HOM05D006811 ORTHO05D008419 1.2e-68 264.2 389 41.9
TWI53G0648 Tripterygium wilfordii HOM05D006811 ORTHO05D008419 6.8e-67 258.5 349 43.3
BolC6t39018H Brassica oleracea HOM05D006811 ORTHO05D008419 2.9e-65 253.1 426 38.7
QL02p064229 Quercus lobata HOM05D006811 ORTHO05D008419 3.5e-63 246.1 437 36.8
Lj4A251G58 Lonicera japonica HOM05D006811 ORTHO05D008419 2.5e-61 240.0 426 36.4
FAN26G0959 Fragaria x ananassa HOM05D006811 ORTHO05D008419 4.3e-61 239.2 389 37.3
ECA238G0794 Erigeron canadensis HOM05D006811 ORTHO05D008419 8.1e-60 235.0 331 42.6
vmacro20465 Vaccinium macrocarpon HOM05D006811 ORTHO05D008419 1.1e-59 234.6 355 41.7
Duzib138G1484 Durio zibethinus HOM05D006811 ORTHO05D008419 4.4e-58 229.2 391 37.9
Manes.02G081300 Manihot esculenta HOM05D006811 ORTHO05D008419 3.9e-54 216.1 298 41.3
FAN28G2567 Fragaria x ananassa HOM05D006811 ORTHO05D008419 2.1e-52 210.3 295 39.0
MELO3C017973.2 Cucumis melo HOM05D006811 ORTHO05D008419 4.7e-52 209.1 167 62.3
Sed0027023 Sechium edule HOM05D006811 ORTHO05D008419 2.4e-51 206.8 297 38.7
Atru.chr1.2130 Acer truncatum HOM05D006811 ORTHO05D008419 9.0e-51 204.9 289 40.5
arahy.Tifrunner.gnm1.ann1.JYBV0C Arachis hypogaea HOM05D006811 ORTHO05D008419 4.9e-49 199.1 174 59.8
Phvul.006G087200 Phaseolus vulgaris HOM05D006811 ORTHO05D008419 5.6e-45 185.7 293 35.8
SGA_v2.0_scaffold115G32048 Striga asiatica HOM05D006811 ORTHO05D008419 5.6e-45 185.7 287 37.3
Gohir.D12G050800 Gossypium hirsutum HOM05D006811 ORTHO05D008419 2.4e-43 180.3 164 56.1
Zm00001eb001500 Zea mays HOM05D006811 ORTHO05D008419 3.4e-42 176.4 170 52.4
Haze_14327 Corylus avellana HOM05D006811 ORTHO05D008419 5.4e-40 169.1 168 55.4
HPP92_014601 Vanilla planifolia HOM05D006811 ORTHO05D008419 2.1e-39 167.2 299 32.1
CSS0020523 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 7.9e-39 165.2 124 63.7
PSO782G1785 Papaver somniferum HOM05D006811 ORTHO05D008419 8.1e-36 155.2 126 60.3
Medtr3g073800 Medicago truncatula HOM05D006811 ORTHO05D008419 5.6e-29 132.5 86 70.9
Cpa.g.sc178.33 Carica papaya HOM05D006811 ORTHO05D008419 9.6e-29 131.7 167 45.5
FAN28G1678 Fragaria x ananassa HOM05D006811 ORTHO05D008419 3.7e-28 129.8 88 76.1
Prupe.3G014300 Prunus persica HOM05D006811 ORTHO05D008419 3.7e-28 129.8 230 34.8
AagrBONN_evm.TU.Sc2ySwM_368.3231 Anthoceros agrestis HOM05D006811 ORTHO05D008419 3.8e-25 119.8 400 26.8
DCAR_017976 Daucus carota HOM05D006811 ORTHO05D008419 5.5e-24 115.9 202 34.2
Os03g0120000 Oryza sativa ssp. japonica HOM05D006811 ORTHO05D008419 1.0e-22 111.7 91 60.4
CSS0043986 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 5.0e-17 92.8 91 52.7
FAN19G2462 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.8e-14 84.3 77 50.6
SEGI_18554 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 3.0e-14 83.6 145 34.5
CBR_g31433 Chara braunii HOM05D006811 ORTHO05D008419 5.7e-13 79.3 124 38.7
HPP92_014605 Vanilla planifolia HOM05D006811 ORTHO05D008419 4.1e-11 73.2 140 32.1
Oeu032292.1 Olea europaea HOM05D006811 ORTHO05D008419 2.9e-09 67.0 41 78.0
arahy.Tifrunner.gnm1.ann1.XFK461 Arachis hypogaea HOM05D006811 ORTHO05D008419 3.8e-09 66.6 49 67.3
COL.COLO4_03698 Corchorus olitorius HOM05D006811 ORTHO05D008419 5.0e-09 66.2 67 49.3
Aa31LG2G2690 Aethionema arabicum HOM05D000356 ORTHO05D000265 8.8e-06 55.5 50 54.0


User provided reference genes

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