Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.06g191340 Amaranthus hybridus HOM05D004975 ORTHO05D005963 1.1e-116 423.3 214 100.0
EL10Ac2g04836 Beta vulgaris HOM05D004975 ORTHO05D005963 1.6e-96 356.3 214 82.7
Hund06848 Selenicereus undatus HOM05D004975 ORTHO05D005963 7.9e-91 337.4 218 78.0
Hund22233 Selenicereus undatus HOM05D004975 ORTHO05D005963 6.7e-90 334.3 209 79.9
EL10Ac4g08846 Beta vulgaris HOM05D004975 ORTHO05D005963 2.4e-87 325.9 200 82.0
Sc24g0001980 Simmondsia chinensis HOM05D004975 ORTHO05D005963 4.2e-84 315.1 216 73.1
PGR044G1665 Punica granatum HOM05D004975 ORTHO05D005963 2.5e-81 305.8 193 74.6
TAR625G0147 Trochodendron aralioides HOM05D004975 ORTHO05D005963 7.4e-81 304.3 200 74.0
Manes.17G086700 Manihot esculenta HOM05D004975 ORTHO05D005963 3.7e-80 302.0 189 76.2
TAR383G0773 Trochodendron aralioides HOM05D004975 ORTHO05D005963 3.7e-80 302.0 201 73.1
Duzib187G1289 Durio zibethinus HOM05D004975 ORTHO05D005963 4.5e-78 295.0 217 68.2
Sed0019969 Sechium edule HOM05D004975 ORTHO05D005963 7.7e-78 294.3 205 70.2
Cpa.g.sc6.221 Carica papaya HOM05D004975 ORTHO05D005963 2.2e-77 292.7 221 67.4
CsaV3_3G001030 Cucumis sativus L. HOM05D004975 ORTHO05D005963 2.2e-77 292.7 189 73.0
Gorai.001G069100 Gossypium raimondii HOM05D004975 ORTHO05D005963 2.2e-77 292.7 214 69.2
ClCG10G000990 Citrullus lanatus HOM05D004975 ORTHO05D005963 3.8e-77 292.0 182 74.7
Ciclev10009422m.g Citrus clementina HOM05D004975 ORTHO05D005963 5.0e-77 291.6 195 72.3
Gohir.A07G060900 Gossypium hirsutum HOM05D004975 ORTHO05D005963 6.5e-77 291.2 214 69.2
TWI34G1428 Tripterygium wilfordii HOM05D004975 ORTHO05D005963 6.5e-77 291.2 199 71.4
Eucgr.H01931 Eucalyptus grandis HOM05D004975 ORTHO05D005963 8.5e-77 290.8 215 66.5
CSS0002597 Camellia sinensis var. sinensis HOM05D004975 ORTHO05D005963 1.1e-76 290.4 193 73.1
MELO3C013792.2 Cucumis melo HOM05D004975 ORTHO05D005963 1.1e-76 290.4 223 66.4
CiPaw.01G062200 Carya illinoinensis HOM05D004975 ORTHO05D005963 1.9e-76 289.7 212 69.3
Lj3g0002799 Lotus japonicus HOM05D004975 ORTHO05D005963 1.9e-76 289.7 208 69.2
Dinv30242 Davidia involucrata HOM05D004975 ORTHO05D005963 2.5e-76 289.3 217 68.2
Cc08_g08560 Coffea canephora HOM05D004975 ORTHO05D005963 4.2e-76 288.5 222 65.8
Hma1.2p1_0140F.1_g063690 Hydrangea macrophylla HOM05D004975 ORTHO05D005963 5.5e-76 288.1 217 65.9
CiPaw.08G019900 Carya illinoinensis HOM05D004975 ORTHO05D005963 9.4e-76 287.3 212 68.9
Thecc.09G007400 Theobroma cacao HOM05D004975 ORTHO05D005963 9.4e-76 287.3 199 71.4
COL.COLO4_19031 Corchorus olitorius HOM05D004975 ORTHO05D005963 1.2e-75 287.0 220 65.5
TAR383G0873 Trochodendron aralioides HOM05D004975 ORTHO05D005963 1.2e-75 287.0 177 77.4
Lj3g0015990 Lotus japonicus HOM05D004975 ORTHO05D005963 1.6e-75 286.6 208 68.3
QL12p025158 Quercus lobata HOM05D004975 ORTHO05D005963 2.1e-75 286.2 199 68.8
Gohir.D07G065600 Gossypium hirsutum HOM05D004975 ORTHO05D005963 2.7e-75 285.8 205 70.2
THA.LOC104803875 Tarenaya hassleriana HOM05D004975 ORTHO05D005963 3.6e-75 285.4 215 63.7
Aqoxy7G00181 Aquilegia oxysepala HOM05D004975 ORTHO05D005963 4.7e-75 285.0 177 78.5
Psat6g036480 Pisum sativum HOM05D004975 ORTHO05D005963 6.1e-75 284.6 182 75.3
SGA_v2.0_scaffold27G11528 Striga asiatica HOM05D004975 ORTHO05D005963 6.1e-75 284.6 219 65.3
arahy.Tifrunner.gnm1.ann1.1NF0KF Arachis hypogaea HOM05D004975 ORTHO05D005963 7.9e-75 284.3 209 68.4
Lalb_Chr18g0045061 Lupinus albus HOM05D004975 ORTHO05D005963 7.9e-75 284.3 182 74.7
Nitab4.5_0000250g0160 Nicotiana tabacum HOM05D004975 ORTHO05D005963 7.9e-75 284.3 216 67.1
Medtr1g007480 Medicago truncatula HOM05D004975 ORTHO05D005963 1.0e-74 283.9 182 74.2
Actinidia13302 Actinidia chinensis HOM05D004975 ORTHO05D005963 1.4e-74 283.5 216 67.1
Actinidia13417 Actinidia chinensis HOM05D004975 ORTHO05D005963 1.4e-74 283.5 215 67.0
SGA_v2.0_scaffold229G43318 Striga asiatica HOM05D004975 ORTHO05D005963 1.4e-74 283.5 202 67.8
GSVIVG01009932001 Vitis vinifera HOM05D004975 ORTHO05D005963 1.4e-74 283.5 194 71.6
Potri.018G006900 Populus trichocarpa HOM05D004975 ORTHO05D005963 1.8e-74 283.1 183 73.2
VMungo1127G2243 Vigna mungo HOM05D004975 ORTHO05D005963 1.8e-74 283.1 177 75.1
TWI63G0658 Tripterygium wilfordii HOM05D004975 ORTHO05D005963 2.3e-74 282.7 201 69.7
TPR.G24523 Trifolium pratense HOM05D004975 ORTHO05D005963 3.0e-74 282.3 201 70.6
Phvul.011G072600 Phaseolus vulgaris HOM05D004975 ORTHO05D005963 3.9e-74 282.0 182 73.1
arahy.Tifrunner.gnm1.ann1.KS8K1P Arachis hypogaea HOM05D004975 ORTHO05D005963 5.1e-74 281.6 210 66.2
Glyma.12G071700 Glycine max HOM05D004975 ORTHO05D005963 8.8e-74 280.8 206 66.5
Peaxi162Scf00105g00510 Petunia axillaris HOM05D004975 ORTHO05D005963 8.8e-74 280.8 219 65.3
Duzib168G2230 Durio zibethinus HOM05D004975 ORTHO05D005963 1.1e-73 280.4 217 66.8
Glyma.11G153169 Glycine max HOM05D004975 ORTHO05D005963 2.6e-73 279.3 208 66.3
Nitab4.5_0002393g0070 Nicotiana tabacum HOM05D004975 ORTHO05D005963 2.6e-73 279.3 209 66.5
arahy.Tifrunner.gnm1.ann1.GL41SS Arachis hypogaea HOM05D004975 ORTHO05D005963 9.7e-73 277.3 210 65.2
MSTRG.11721 Avicennia marina HOM05D004975 ORTHO05D005963 9.7e-73 277.3 222 63.5
AL7G20600 Arabidopsis lyrata HOM05D004975 ORTHO05D005963 1.3e-72 276.9 218 64.2
Atru.chr7.2646 Acer truncatum HOM05D004975 ORTHO05D005963 1.7e-72 276.6 209 67.0
Solyc08g065760.3 Solanum lycopersicum HOM05D004975 ORTHO05D005963 4.8e-72 275.0 216 65.7
Sopen10g033590 Solanum pennellii HOM05D004975 ORTHO05D005963 4.8e-72 275.0 216 65.7
ATR0580G184 Amborella trichopoda HOM05D004975 ORTHO05D005963 6.3e-72 274.6 205 64.9
CANSAT64G0033 Cannabis sativa HOM05D004975 ORTHO05D005963 8.2e-72 274.2 208 66.8
DCAR_007697 Daucus carota HOM05D004975 ORTHO05D005963 8.2e-72 274.2 209 66.0
Lsat_1_v5_gn_1_49060 Lactuca sativa HOM05D004975 ORTHO05D005963 1.1e-71 273.9 200 68.5
CARHR239350 Cardamine hirsuta HOM05D004975 ORTHO05D005963 2.4e-71 272.7 214 64.0
Migut.A00251 Erythranthe guttata HOM05D004975 ORTHO05D005963 2.4e-71 272.7 215 61.9
PGSC0003DMG400013829 Solanum tuberosum HOM05D004975 ORTHO05D005963 3.1e-71 272.3 216 64.8
CANSAT25G3538 Cannabis sativa HOM05D004975 ORTHO05D005963 5.3e-71 271.6 205 66.8
Ca_12771_v3 Cicer arietinum L. HOM05D004975 ORTHO05D005963 5.3e-71 271.6 204 67.2
Aa31LG2G18860 Aethionema arabicum HOM05D004975 ORTHO05D005963 7.0e-71 271.2 214 63.6
HanXRQChr11g0341541 Helianthus annuus HOM05D004975 ORTHO05D005963 7.0e-71 271.2 215 65.6
MBI16_g41808_MAGBIO Magnolia biondii HOM05D004975 ORTHO05D005963 1.2e-70 270.4 194 66.0
HanXRQChr01g0029381 Helianthus annuus HOM05D004975 ORTHO05D005963 2.0e-70 269.6 215 65.1
Sopen08g019440 Solanum pennellii HOM05D004975 ORTHO05D005963 4.5e-70 268.5 179 71.5
ECA248G0122 Erigeron canadensis HOM05D004975 ORTHO05D005963 5.9e-70 268.1 215 63.3
SHI04272 Sapria himalayana HOM05D004975 ORTHO05D005963 1.0e-69 267.3 206 63.6
ECA248G2823 Erigeron canadensis HOM05D004975 ORTHO05D005963 6.5e-69 264.6 215 65.1
AT4G31460 Arabidopsis thaliana HOM05D004975 ORTHO05D005963 2.7e-67 259.2 174 71.3
arahy.Tifrunner.gnm1.ann1.57HDZK Arachis hypogaea HOM05D004975 ORTHO05D005963 4.7e-67 258.5 210 62.4
unitig_46.g18530 Utricularia gibba HOM05D004975 ORTHO05D005963 8.0e-67 257.7 179 68.2
BcaB03g12697 Brassica carinata HOM05D004975 ORTHO05D005963 2.3e-66 256.1 169 71.0
BraA08t33823Z Brassica rapa HOM05D004975 ORTHO05D005963 2.3e-66 256.1 169 71.0
CDE02G4585 Ceratophyllum demersum HOM05D004975 ORTHO05D005963 2.3e-66 256.1 173 69.9
Sp7g29320 Schrenkiella parvula HOM05D004975 ORTHO05D005963 3.0e-66 255.8 169 71.0
Thhalv10026230m.g Eutrema salsugineum HOM05D004975 ORTHO05D005963 4.0e-66 255.4 217 60.4
Carub.0007s0909 Capsella rubella HOM05D004975 ORTHO05D005963 5.2e-66 255.0 214 59.8
RcHm_v2.0_Chr6g0305011 Rosa chinensis HOM05D004975 ORTHO05D005963 5.2e-66 255.0 227 59.0
BcaNung04586 Brassica carinata HOM05D004975 ORTHO05D005963 6.7e-66 254.6 168 70.8
A08p18600 Brassica napus HOM05D004975 ORTHO05D005963 6.7e-66 254.6 168 70.8
CDE05G0021 Ceratophyllum demersum HOM05D004975 ORTHO05D005963 6.7e-66 254.6 203 63.1
BcaC09g51928 Brassica carinata HOM05D004975 ORTHO05D005963 8.8e-66 254.2 169 70.4
A01p06810 Brassica napus HOM05D004975 ORTHO05D005963 8.8e-66 254.2 214 59.8
BraA01t00633Z Brassica rapa HOM05D004975 ORTHO05D005963 8.8e-66 254.2 214 59.8
C01p07550 Brassica napus HOM05D004975 ORTHO05D005963 1.1e-65 253.8 214 60.3
BolC1t00736H Brassica oleracea HOM05D004975 ORTHO05D005963 1.1e-65 253.8 214 60.3
HPP92_011116 Vanilla planifolia HOM05D004975 ORTHO05D005963 1.5e-65 253.4 189 65.6
BcaC01g01087 Brassica carinata HOM05D004975 ORTHO05D005963 1.3e-64 250.4 169 69.8
C03p87960 Brassica napus HOM05D004975 ORTHO05D005963 1.3e-64 250.4 169 69.8
BolC3t21107H Brassica oleracea HOM05D004975 ORTHO05D005963 1.3e-64 250.4 169 69.8
FvH4_2g36661 Fragaria vesca HOM05D004975 ORTHO05D005963 1.3e-64 250.4 227 58.1
FAN20G1154 Fragaria x ananassa HOM05D007251 ORTHO05D009266 1.3e-64 250.4 227 59.5
Rhsim04G0150100 Rhododendron simsii HOM05D004975 ORTHO05D005963 1.1e-63 247.3 211 62.6
Sabra18G0014600 Salix brachista HOM05D004975 ORTHO05D005963 2.7e-62 242.7 289 47.4
Os07g0544900 Oryza sativa ssp. japonica HOM05D004975 ORTHO05D005963 5.9e-62 241.5 177 66.1
Zm00001eb323470 Zea mays HOM05D004975 ORTHO05D005963 1.3e-61 240.4 177 65.5
MD08G1128100 Malus domestica HOM05D004975 ORTHO05D005963 3.8e-61 238.8 217 58.5
Prupe.1G459900 Prunus persica HOM05D004975 ORTHO05D005963 1.1e-60 237.3 241 55.2
AUR62027460 Chenopodium quinoa HOM05D004975 ORTHO05D005963 5.5e-60 235.0 155 78.7
MD15G1107600 Malus domestica HOM05D004975 ORTHO05D005963 3.6e-59 232.3 216 56.9
PSO063G2087 Papaver somniferum HOM05D004975 ORTHO05D005963 2.3e-58 229.6 154 70.1
PSO063G4606 Papaver somniferum HOM05D004975 ORTHO05D005963 6.8e-58 228.0 154 69.5
Zm00001eb106440 Zea mays HOM05D004975 ORTHO05D005963 1.2e-57 227.3 188 58.5
PSO170G1562 Papaver somniferum HOM05D004975 ORTHO05D005963 2.0e-57 226.5 218 56.0
FAN06G0478 Fragaria x ananassa HOM05D004975 ORTHO05D005963 7.5e-57 224.6 191 62.3
SEGI_29047 Sequoiadendron giganteum HOM05D004975 ORTHO05D005963 9.8e-57 224.2 188 60.1
FvH4_7g03740 Fragaria vesca HOM05D004975 ORTHO05D005963 2.7e-54 216.1 136 75.0
Haze_21744 Corylus avellana HOM05D004975 ORTHO05D005963 5.9e-54 214.9 286 44.1
Manes.15G137600 Manihot esculenta HOM05D004975 ORTHO05D005963 1.0e-53 214.2 189 56.6
PSO782G1312 Papaver somniferum HOM05D004975 ORTHO05D005963 5.0e-53 211.8 140 70.7
Lj7C709T7 Lonicera japonica HOM05D004975 ORTHO05D005963 5.2e-50 201.8 133 72.2
Nn2g12690 Nelumbo nucifera HOM05D004975 ORTHO05D005963 1.3e-48 197.2 134 74.6
CAN.G886.9 Capsicum annuum HOM05D004975 ORTHO05D005963 2.0e-46 189.9 151 64.9
Oeu031567.1 Olea europaea HOM05D004975 ORTHO05D005963 3.5e-46 189.1 151 62.3
Ca_29761_v3 Cicer arietinum L. HOM05D004975 ORTHO05D005963 1.9e-44 183.3 142 66.9
vmacro05353 Vaccinium macrocarpon HOM05D004975 ORTHO05D005963 7.5e-41 171.4 149 60.4
HPP92_011121 Vanilla planifolia HOM05D004975 ORTHO05D005963 3.7e-40 169.1 146 61.0
Cfa013273 Carpinus fangiana HOM05D004975 ORTHO05D005963 2.4e-39 166.4 107 72.0
SMO367G1088 Selaginella moellendorffii HOM05D004975 ORTHO05D005963 1.1e-36 157.5 113 64.6
Pp3c2_35700 Physcomitrium patens HOM05D004975 ORTHO05D005963 1.9e-36 156.8 108 63.9
Mapoly0026s0002 Marchantia polymorpha HOM05D004975 ORTHO05D005963 9.5e-36 154.5 106 64.2
AagrBONN_evm.TU.Sc2ySwM_117.1642 Anthoceros agrestis HOM05D004975 ORTHO05D005963 1.2e-35 154.1 131 55.0
Solyc10g038060.2 Solanum lycopersicum HOM05D004975 ORTHO05D005963 2.1e-35 153.3 176 50.6
BcaC01g01097 Brassica carinata HOM05D004975 ORTHO05D005963 7.8e-30 134.8 93 66.7
BcaNung04139 Brassica carinata HOM05D004975 ORTHO05D005963 1.3e-29 134.0 135 54.8
C03p88060 Brassica napus HOM05D004975 ORTHO05D005963 1.3e-29 134.0 91 67.0
BcaNung01521 Brassica carinata HOM05D004975 ORTHO05D005963 2.3e-29 133.3 131 55.7
AUR62027459 Chenopodium quinoa HOM05D004975 ORTHO05D005963 9.8e-25 117.9 66 81.8
Aqoxy3G03669 Aquilegia oxysepala HOM05D004975 ORTHO05D005963 4.1e-23 112.5 88 64.8
BcaB03g12699 Brassica carinata HOM05D004975 ORTHO05D005963 5.2e-18 95.5 90 53.3
Oeu033208.1 Olea europaea HOM05D004975 ORTHO05D005963 7.6e-17 91.7 99 51.5
PRCOL_00000323 Prasinoderma coloniale HOM05D004975 ORTHO05D005963 8.4e-16 88.2 94 45.7
Cfa025056 Carpinus fangiana HOM05D004975 ORTHO05D005963 1.5e-12 77.4 73 52.1
CBR_g8145 Chara braunii HOM05D004975 ORTHO05D005963 5.6e-12 75.5 54 61.1
Sopen10g011390 Solanum pennellii HOM05D004975 ORTHO05D005963 1.2e-11 74.3 58 60.3
AagrBONN_evm.TU.Sc2ySwM_368.1480 Anthoceros agrestis HOM05D001654 ORTHO05D002773 3.1e-10 69.7 46 58.7
CiPaw.07G212300 Carya illinoinensis HOM05D004975 ORTHO05D005963 5.2e-10 68.9 48 66.7


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