Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.06g190980 Amaranthus hybridus HOM05D006279 ORTHO05D008055 5.6e-88 327.8 192 100.0
AUR62006855 Chenopodium quinoa HOM05D006279 ORTHO05D008055 2.1e-34 149.8 99 77.8
AUR62000510 Chenopodium quinoa HOM05D006279 ORTHO05D008055 6.1e-34 148.3 96 76.0
EL10Ac4g09617 Beta vulgaris HOM05D006279 ORTHO05D008055 1.4e-33 147.1 96 76.0
Cpa.g.sc2692.1 Carica papaya HOM05D006279 ORTHO05D008055 2.7e-26 122.9 97 63.9
MD09G1082400 Malus domestica HOM05D006279 ORTHO05D008055 8.0e-26 121.3 99 65.7
Sc09g0002260 Simmondsia chinensis HOM05D006279 ORTHO05D008055 8.0e-26 121.3 98 66.3
FAN09G2945 Fragaria x ananassa HOM05D006279 ORTHO05D008055 1.4e-25 120.6 96 65.6
MD10G1003300 Malus domestica HOM05D006279 ORTHO05D008055 1.4e-25 120.6 99 64.6
Hma1.2p1_0847F.1_g227850 Hydrangea macrophylla HOM05D006279 ORTHO05D008055 6.8e-25 118.2 97 61.9
Peaxi162Scf00386g00058 Petunia axillaris HOM05D006279 ORTHO05D008055 6.8e-25 118.2 102 59.8
Potri.005G066900 Populus trichocarpa HOM05D006279 ORTHO05D008055 6.8e-25 118.2 97 63.9
Atru.chr1.2785 Acer truncatum HOM05D006279 ORTHO05D008055 1.5e-24 117.1 98 63.3
RcHm_v2.0_Chr2g0163441 Rosa chinensis HOM05D006279 ORTHO05D008055 1.5e-24 117.1 96 64.6
THA.LOC104818424 Tarenaya hassleriana HOM05D006279 ORTHO05D008055 2.0e-24 116.7 97 62.9
Haze_02674 Corylus avellana HOM05D006279 ORTHO05D008055 3.4e-24 115.9 97 60.8
Sabra05G0055000 Salix brachista HOM05D006279 ORTHO05D008055 3.4e-24 115.9 97 61.9
Actinidia20026 Actinidia chinensis HOM05D006279 ORTHO05D008055 5.7e-24 115.2 94 63.8
Dinv44192 Davidia involucrata HOM05D006279 ORTHO05D008055 5.7e-24 115.2 97 63.9
FvH4_6g45500 Fragaria vesca HOM05D006279 ORTHO05D008055 5.7e-24 115.2 96 63.5
FAN05G3461 Fragaria x ananassa HOM05D006279 ORTHO05D008055 5.7e-24 115.2 96 63.5
FAN14G0828 Fragaria x ananassa HOM05D006279 ORTHO05D008055 5.7e-24 115.2 96 63.5
Nitab4.5_0000829g0220 Nicotiana tabacum HOM05D006279 ORTHO05D008055 5.7e-24 115.2 102 58.8
Cfa011174 Carpinus fangiana HOM05D006279 ORTHO05D008055 7.5e-24 114.8 97 60.8
Haze_02661 Corylus avellana HOM05D006279 ORTHO05D008055 9.8e-24 114.4 97 59.8
PGSC0003DMG400022672 Solanum tuberosum HOM05D006279 ORTHO05D008055 9.8e-24 114.4 102 56.9
Ciclev10003637m.g Citrus clementina HOM05D006279 ORTHO05D008055 1.7e-23 113.6 98 66.3
Eucgr.I00130 Eucalyptus grandis HOM05D006279 ORTHO05D008055 1.7e-23 113.6 92 64.1
Nitab4.5_0000644g0080 Nicotiana tabacum HOM05D006279 ORTHO05D008055 2.8e-23 112.8 102 59.8
Nitab4.5_0001688g0060 Nicotiana tabacum HOM05D006279 ORTHO05D008055 2.8e-23 112.8 102 58.8
QL10p041722 Quercus lobata HOM05D006279 ORTHO05D008055 2.8e-23 112.8 97 61.9
CAN.G1592.9 Capsicum annuum HOM05D006279 ORTHO05D008055 3.7e-23 112.5 102 58.8
TPR.G17035 Trifolium pratense HOM05D006279 ORTHO05D008055 3.7e-23 112.5 82 65.9
Cc09_g10080 Coffea canephora HOM05D006279 ORTHO05D008055 4.8e-23 112.1 96 61.5
Psat6g191840 Pisum sativum HOM05D006279 ORTHO05D008055 6.3e-23 111.7 93 62.4
Actinidia30262 Actinidia chinensis HOM05D006279 ORTHO05D008055 8.3e-23 111.3 79 65.8
Ca_13203_v3 Cicer arietinum L. HOM05D006279 ORTHO05D008055 8.3e-23 111.3 93 61.3
ClCG02G000360 Citrullus lanatus HOM05D006279 ORTHO05D008055 8.3e-23 111.3 94 60.6
Potri.007G102600 Populus trichocarpa HOM05D006279 ORTHO05D008055 8.3e-23 111.3 97 58.8
PGSC0003DMG400030782 Solanum tuberosum HOM05D006279 ORTHO05D008055 8.3e-23 111.3 77 70.1
Oeu006489.1 Olea europaea HOM05D006279 ORTHO05D008055 1.1e-22 110.9 99 56.6
Thecc.08G189700 Theobroma cacao HOM05D006279 ORTHO05D008055 1.1e-22 110.9 97 57.7
Phvul.008G125700 Phaseolus vulgaris HOM05D006279 ORTHO05D008055 2.4e-22 109.8 97 58.8
Prupe.3G241300 Prunus persica HOM05D006279 ORTHO05D008055 2.4e-22 109.8 90 60.0
Sabra07G0084300 Salix brachista HOM05D006279 ORTHO05D008055 2.4e-22 109.8 97 57.7
arahy.Tifrunner.gnm1.ann1.96G0FW Arachis hypogaea HOM05D006279 ORTHO05D008055 3.1e-22 109.4 80 66.2
CSS0021017 Camellia sinensis var. sinensis HOM05D006279 ORTHO05D008055 3.1e-22 109.4 97 60.8
Gohir.D05G287900 Gossypium hirsutum HOM05D006279 ORTHO05D008055 3.1e-22 109.4 97 55.7
Gorai.009G302900 Gossypium raimondii HOM05D006279 ORTHO05D008055 3.1e-22 109.4 97 55.7
TWI79G1313 Tripterygium wilfordii HOM05D006279 ORTHO05D008055 3.1e-22 109.4 97 59.8
CSS0005410 Camellia sinensis var. sinensis HOM05D006279 ORTHO05D008055 4.1e-22 109.0 97 59.8
Psat4g003200 Pisum sativum HOM05D006279 ORTHO05D008055 4.1e-22 109.0 80 65.0
COL.COLO4_11288 Corchorus olitorius HOM05D006279 ORTHO05D008055 5.4e-22 108.6 97 56.7
Glyma.08G354200 Glycine max HOM05D006279 ORTHO05D008055 5.4e-22 108.6 96 55.2
Gohir.A05G286900 Gossypium hirsutum HOM05D006279 ORTHO05D008055 5.4e-22 108.6 97 55.7
Solyc06g054590.3 Solanum lycopersicum HOM05D006279 ORTHO05D008055 5.4e-22 108.6 103 58.3
CARHR204140 Cardamine hirsuta HOM05D006279 ORTHO05D008055 7.0e-22 108.2 96 59.4
Duzib177G0075 Durio zibethinus HOM05D006279 ORTHO05D008055 7.0e-22 108.2 97 55.7
PGR119G2211 Punica granatum HOM05D006279 ORTHO05D008055 7.0e-22 108.2 86 66.3
Sopen06g019660 Solanum pennellii HOM05D006279 ORTHO05D008055 7.0e-22 108.2 98 58.2
Glyma.18G170600 Glycine max HOM05D006279 ORTHO05D008055 9.1e-22 107.8 97 56.7
Lj1g0019467 Lotus japonicus HOM05D006279 ORTHO05D008055 9.1e-22 107.8 92 60.9
Nn2g15145 Nelumbo nucifera HOM05D006279 ORTHO05D008055 9.1e-22 107.8 95 56.8
arahy.Tifrunner.gnm1.ann1.YQI87S Arachis hypogaea HOM05D006279 ORTHO05D008055 1.2e-21 107.5 105 55.2
BraA02t04974Z Brassica rapa HOM05D006279 ORTHO05D008055 1.6e-21 107.1 97 56.7
BraA10t44844Z Brassica rapa HOM05D006279 ORTHO05D008055 1.6e-21 107.1 94 57.4
CiPaw.14G026200 Carya illinoinensis HOM05D006279 ORTHO05D008055 1.6e-21 107.1 97 56.7
Manes.01G181300 Manihot esculenta HOM05D006279 ORTHO05D008055 1.6e-21 107.1 94 57.4
Peaxi162Scf00033g00134 Petunia axillaris HOM05D006279 ORTHO05D008055 1.6e-21 107.1 103 57.3
AL6G19660 Arabidopsis lyrata HOM05D006279 ORTHO05D008055 2.0e-21 106.7 97 55.7
Nitab4.5_0010800g0010 Nicotiana tabacum HOM05D006279 ORTHO05D008055 2.7e-21 106.3 94 59.6
VMungo1383G1366 Vigna mungo HOM05D006279 ORTHO05D008055 2.7e-21 106.3 97 55.7
Medtr1g098510 Medicago truncatula HOM05D006279 ORTHO05D008055 3.5e-21 105.9 86 59.3
vmacro13565 Vaccinium macrocarpon HOM05D006279 ORTHO05D008055 4.5e-21 105.5 94 54.3
Sp6g34040 Schrenkiella parvula HOM05D006279 ORTHO05D008055 5.9e-21 105.1 97 54.6
vmacro12040 Vaccinium macrocarpon HOM05D006279 ORTHO05D008055 7.7e-21 104.8 90 56.7
Aqoxy2G01154 Aquilegia oxysepala HOM05D006279 ORTHO05D008055 1.0e-20 104.4 88 54.5
A10p27950 Brassica napus HOM05D004285 ORTHO05D005176 1.3e-20 104.0 91 56.0
Thhalv10015068m.g Eutrema salsugineum HOM05D006279 ORTHO05D008055 1.3e-20 104.0 97 53.6
BcaB05g21561 Brassica carinata HOM05D006279 ORTHO05D008055 1.7e-20 103.6 95 54.7
Migut.B01200 Erythranthe guttata HOM05D006279 ORTHO05D008055 1.7e-20 103.6 101 55.4
TAR623G0329 Trochodendron aralioides HOM05D006279 ORTHO05D008055 1.7e-20 103.6 97 56.7
AT5G09270 Arabidopsis thaliana HOM05D006279 ORTHO05D008055 2.3e-20 103.2 97 53.6
BolC2t06340H Brassica oleracea HOM05D006279 ORTHO05D008055 2.3e-20 103.2 95 54.7
BolC9t59565H Brassica oleracea HOM05D004285 ORTHO05D005176 2.3e-20 103.2 91 57.1
CAN.G256.17 Capsicum annuum HOM05D006279 ORTHO05D008055 2.3e-20 103.2 97 55.7
HanXRQChr10g0308251 Helianthus annuus HOM05D006279 ORTHO05D008055 2.3e-20 103.2 107 52.3
MBI06_g37673_MAGBIO Magnolia biondii HOM05D006279 ORTHO05D008055 2.3e-20 103.2 78 62.8
MBI06_g46723_MAGBIO Magnolia biondii HOM05D006279 ORTHO05D008055 2.3e-20 103.2 78 62.8
Sed0009157 Sechium edule HOM05D006279 ORTHO05D008055 3.8e-20 102.4 85 62.4
Carub.0006s0782 Capsella rubella HOM05D006279 ORTHO05D008055 5.0e-20 102.1 95 54.7
CsaV3_2G019480 Cucumis sativus L. HOM05D006279 ORTHO05D008055 5.0e-20 102.1 94 56.4
arahy.Tifrunner.gnm1.ann1.BRZ89T Arachis hypogaea HOM05D006279 ORTHO05D008055 6.6e-20 101.7 83 60.2
C09p68090 Brassica napus HOM05D004285 ORTHO05D005176 6.6e-20 101.7 91 56.0
C09p68110 Brassica napus HOM05D006279 ORTHO05D008055 6.6e-20 101.7 91 56.0
C09p68150 Brassica napus HOM05D006279 ORTHO05D008055 6.6e-20 101.7 91 56.0
TAR369G0312 Trochodendron aralioides HOM05D006279 ORTHO05D008055 6.6e-20 101.7 97 56.7
MSTRG.20541 Avicennia marina HOM05D006279 ORTHO05D008055 8.6e-20 101.3 102 52.0
BcaC03g13247 Brassica carinata HOM05D006279 ORTHO05D008055 8.6e-20 101.3 97 55.7
C02p03790 Brassica napus HOM05D006279 ORTHO05D008055 8.6e-20 101.3 97 55.7
Lsat_1_v5_gn_5_86080 Lactuca sativa HOM05D006279 ORTHO05D008055 8.6e-20 101.3 104 53.8
GSVIVG01023542001 Vitis vinifera HOM05D006279 ORTHO05D008055 8.6e-20 101.3 97 55.7
CANSAT64G0511 Cannabis sativa HOM05D006279 ORTHO05D008055 1.1e-19 100.9 91 58.2
Rhsim10G0172600 Rhododendron simsii HOM05D006279 ORTHO05D008055 1.1e-19 100.9 80 63.8
DCAR_026025 Daucus carota HOM05D006279 ORTHO05D008055 1.5e-19 100.5 76 67.1
COL.COLO4_13057 Corchorus olitorius HOM05D006279 ORTHO05D008055 2.5e-19 99.8 95 54.7
BcaB08g37221 Brassica carinata HOM05D006279 ORTHO05D008055 3.3e-19 99.4 98 51.0
MELO3C023226.2 Cucumis melo HOM05D006279 ORTHO05D008055 3.3e-19 99.4 94 54.3
Eucgr.L03476 Eucalyptus grandis HOM05D006279 ORTHO05D008055 3.3e-19 99.4 75 65.3
Lalb_Chr01g0022321 Lupinus albus HOM05D006279 ORTHO05D008055 3.3e-19 99.4 92 56.5
C09p68050 Brassica napus HOM05D006279 ORTHO05D008055 5.5e-19 98.6 84 57.1
SHI36067 Sapria himalayana HOM05D006279 ORTHO05D008055 1.2e-18 97.4 91 57.1
CANSAT78G0480 Cannabis sativa HOM05D006279 ORTHO05D008055 2.1e-18 96.7 95 53.7
Aa31LG3G17730 Aethionema arabicum HOM05D006279 ORTHO05D008055 6.1e-18 95.1 97 51.5
ATR0824G232 Amborella trichopoda HOM05D006279 ORTHO05D008055 1.0e-17 94.4 64 65.6
Eucgr.I00134 Eucalyptus grandis HOM05D006279 ORTHO05D008055 1.8e-17 93.6 74 60.8
Eucgr.I00143 Eucalyptus grandis HOM05D006279 ORTHO05D008055 1.8e-17 93.6 64 65.6
HPP92_013811 Vanilla planifolia HOM05D006279 ORTHO05D008055 4.0e-17 92.4 78 53.8
Atru.chr9.833 Acer truncatum HOM05D000003 ORTHO05D000126 9.8e-16 87.8 73 61.6
arahy.Tifrunner.gnm1.ann1.BUL9CE Arachis hypogaea HOM05D006279 ORTHO05D008055 8.3e-15 84.7 59 66.1
Os01g0861000 Oryza sativa ssp. japonica HOM05D006279 ORTHO05D008055 1.1e-14 84.3 65 61.5
SEGI_20234 Sequoiadendron giganteum HOM05D006279 ORTHO05D008055 1.6e-13 80.5 80 51.2
COL.COLO4_36340 Corchorus olitorius HOM05D006279 ORTHO05D008055 7.8e-13 78.2 72 50.0
Pp3c8_7150 Physcomitrium patens HOM05D006279 ORTHO05D008055 8.0e-10 68.2 93 39.8
Sopen01g029410 Solanum pennellii HOM05D006279 ORTHO05D008055 8.0e-10 68.2 68 47.1
Mapoly0027s0076 Marchantia polymorpha HOM05D006279 ORTHO05D008055 2.3e-09 66.6 86 43.0
Hund27727 Selenicereus undatus HOM05D060394 ORTHO05D050910 5.8e-08 62.0 38 84.2
Hund27731 Selenicereus undatus HOM05D060394 ORTHO05D050910 5.8e-08 62.0 38 84.2
Hma1.2p1_4173F.1_g338420 Hydrangea macrophylla HOM05D006279 ORTHO05D008055 9.8e-08 61.2 42 69.0
Oeu062074.1 Olea europaea HOM05D013196 ORTHO05D010523 5.4e-06 55.5 40 65.0


User provided reference genes

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