Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.06g190140 Amaranthus hybridus HOM05D006710 ORTHO05D008353 6.2e-129 464.2 236 100.0
EL10Ac4g09302 Beta vulgaris HOM05D006710 ORTHO05D008353 1.0e-91 340.5 252 75.4
AUR62005111 Chenopodium quinoa HOM05D006710 ORTHO05D008353 2.5e-90 335.9 253 73.1
AUR62000864 Chenopodium quinoa HOM05D006710 ORTHO05D008353 3.3e-90 335.5 253 73.1
Dinv40255 Davidia involucrata HOM05D006710 ORTHO05D008353 5.7e-82 308.1 250 67.2
Cpa.g.sc48.8 Carica papaya HOM05D006710 ORTHO05D008353 1.1e-80 303.9 241 66.0
Rhsim07G0179500 Rhododendron simsii HOM05D006710 ORTHO05D008353 4.5e-79 298.5 251 64.9
Sabra13G0027300 Salix brachista HOM05D006710 ORTHO05D008353 7.7e-79 297.7 248 64.9
Manes.09G163400 Manihot esculenta HOM05D006710 ORTHO05D008353 1.3e-78 297.0 251 65.7
Thecc.05G308800 Theobroma cacao HOM05D006710 ORTHO05D008353 1.3e-78 297.0 248 65.3
Actinidia23607 Actinidia chinensis HOM05D006710 ORTHO05D008353 1.7e-78 296.6 249 66.7
CSS0006596 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 1.7e-78 296.6 249 65.5
CSS0018519 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 2.9e-78 295.8 209 72.2
vmacro05032 Vaccinium macrocarpon HOM05D006710 ORTHO05D008353 6.5e-78 294.7 232 66.4
QL03p004347 Quercus lobata HOM05D006710 ORTHO05D008353 8.5e-78 294.3 248 65.3
Duzib177G0772 Durio zibethinus HOM05D006710 ORTHO05D008353 1.4e-77 293.5 255 63.1
Potri.013G026500 Populus trichocarpa HOM05D006710 ORTHO05D008353 1.9e-77 293.1 248 63.3
Actinidia05724 Actinidia chinensis HOM05D006710 ORTHO05D008353 3.2e-77 292.4 253 65.2
Hund07043 Selenicereus undatus HOM05D006710 ORTHO05D008353 3.2e-77 292.4 251 64.1
TWI56G0551 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 5.5e-77 291.6 251 65.3
PGR031G3544 Punica granatum HOM05D006710 ORTHO05D008353 9.4e-77 290.8 215 71.6
Haze_04239 Corylus avellana HOM05D006710 ORTHO05D008353 3.6e-76 288.9 247 65.2
arahy.Tifrunner.gnm1.ann1.ACRB0G Arachis hypogaea HOM05D006710 ORTHO05D008353 7.9e-76 287.7 247 63.6
arahy.Tifrunner.gnm1.ann1.KZLY5F Arachis hypogaea HOM05D006710 ORTHO05D008353 1.8e-75 286.6 247 63.2
Cfa006542 Carpinus fangiana HOM05D006710 ORTHO05D008353 1.8e-75 286.6 251 64.9
RcHm_v2.0_Chr3g0454051 Rosa chinensis HOM05D006710 ORTHO05D008353 5.1e-75 285.0 251 61.8
Ciclev10002268m.g Citrus clementina HOM05D006710 ORTHO05D008353 6.7e-75 284.6 246 62.6
Glyma.10G157000 Glycine max HOM05D006710 ORTHO05D008353 6.7e-75 284.6 230 63.9
FAN05G4089 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.5e-74 283.5 241 62.2
TWI12G0766 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 2.0e-74 283.1 251 63.7
Gohir.D13G178900 Gossypium hirsutum HOM05D006710 ORTHO05D008353 7.4e-74 281.2 255 61.6
Gorai.013G204100 Gossypium raimondii HOM05D006710 ORTHO05D008353 7.4e-74 281.2 250 62.0
CiPaw.08G166900 Carya illinoinensis HOM05D006710 ORTHO05D008353 1.7e-73 280.0 251 60.6
Atru.chr2.492 Acer truncatum HOM05D006710 ORTHO05D008353 2.2e-73 279.6 248 62.1
COL.COLO4_13519 Corchorus olitorius HOM05D000735 ORTHO05D000838 2.8e-73 279.3 234 65.0
Nn4g26145 Nelumbo nucifera HOM05D006710 ORTHO05D008353 2.8e-73 279.3 256 60.2
CAN.G809.16 Capsicum annuum HOM05D006710 ORTHO05D008353 4.8e-73 278.5 246 62.2
Gohir.A13G173100 Gossypium hirsutum HOM05D006710 ORTHO05D008353 6.3e-73 278.1 254 59.8
Gohir.D11G272800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 6.3e-73 278.1 251 61.4
Gorai.007G294100 Gossypium raimondii HOM05D006710 ORTHO05D008353 6.3e-73 278.1 251 61.4
Peaxi162Scf00071g00728 Petunia axillaris HOM05D006710 ORTHO05D008353 1.8e-72 276.6 245 59.2
CsaV3_2G004900 Cucumis sativus L. HOM05D006710 ORTHO05D008353 3.1e-72 275.8 252 59.5
Prupe.6G330500 Prunus persica HOM05D006710 ORTHO05D008353 3.1e-72 275.8 253 59.7
Phvul.007G182300 Phaseolus vulgaris HOM05D006710 ORTHO05D008353 4.1e-72 275.4 233 61.4
FAN14G5365 Fragaria x ananassa HOM05D006710 ORTHO05D008353 6.9e-72 274.6 263 56.7
MSTRG.20477 Avicennia marina HOM05D006710 ORTHO05D008353 1.2e-71 273.9 253 58.9
THA.LOC104802809 Tarenaya hassleriana HOM05D006710 ORTHO05D008353 1.5e-71 273.5 252 60.3
Eucgr.H04455 Eucalyptus grandis HOM05D006710 ORTHO05D008353 2.6e-71 272.7 252 60.7
VMungo0720G2835 Vigna mungo HOM05D006710 ORTHO05D008353 3.4e-71 272.3 233 60.5
MBI19_g27535_MAGBIO Magnolia biondii HOM05D006710 ORTHO05D008353 7.7e-71 271.2 214 65.0
MD04G1209500 Malus domestica HOM05D006710 ORTHO05D008353 1.3e-70 270.4 249 59.0
Lalb_Chr15g0077091 Lupinus albus HOM05D006710 ORTHO05D008353 3.8e-70 268.9 235 61.3
CANSAT54G0344 Cannabis sativa HOM05D006710 ORTHO05D008353 6.5e-70 268.1 252 61.1
Lalb_Chr02g0148381 Lupinus albus HOM05D006710 ORTHO05D008353 1.4e-69 266.9 243 61.3
PGSC0003DMG400026653 Solanum tuberosum HOM05D006710 ORTHO05D008353 1.4e-69 266.9 245 61.6
CARHR185990 Cardamine hirsuta HOM05D006710 ORTHO05D008353 1.9e-69 266.5 252 57.9
Sopen08g012960 Solanum pennellii HOM05D006710 ORTHO05D008353 2.5e-69 266.2 245 61.2
Nitab4.5_0000424g0030 Nicotiana tabacum HOM05D006710 ORTHO05D008353 5.5e-69 265.0 240 60.4
SalBow8G3090 Salvia bowleyana HOM05D006710 ORTHO05D008353 5.5e-69 265.0 238 57.6
HanXRQChr09g0258761 Helianthus annuus HOM05D006710 ORTHO05D008353 7.2e-69 264.6 246 57.7
Lj9A681T40 Lonicera japonica HOM05D006710 ORTHO05D008353 9.4e-69 264.2 264 54.9
Nitab4.5_0010747g0020 Nicotiana tabacum HOM05D006710 ORTHO05D008353 1.2e-68 263.8 244 60.2
Sed0009429 Sechium edule HOM05D006710 ORTHO05D008353 2.1e-68 263.1 262 56.1
FAN09G4503 Fragaria x ananassa HOM05D006710 ORTHO05D008353 2.7e-68 262.7 282 53.2
Sc09g0003360 Simmondsia chinensis HOM05D006710 ORTHO05D006029 2.7e-68 262.7 162 79.0
MD12G1224100 Malus domestica HOM05D006710 ORTHO05D008353 3.6e-68 262.3 249 57.4
Solyc08g043180.3 Solanum lycopersicum HOM05D006710 ORTHO05D008353 4.7e-68 261.9 195 67.7
Aqoxy2G03215 Aquilegia oxysepala HOM05D006710 ORTHO05D008353 6.1e-68 261.5 247 59.1
unitig_0.g2209 Utricularia gibba HOM05D006710 ORTHO05D008353 1.8e-67 260.0 209 63.2
ECA232G0378 Erigeron canadensis HOM05D006710 ORTHO05D008353 2.3e-67 259.6 189 66.1
ClCG02G016080 Citrullus lanatus HOM05D006710 ORTHO05D008353 1.1e-66 257.3 252 57.5
Migut.B01148 Erythranthe guttata HOM05D006710 ORTHO05D008353 5.7e-66 255.0 177 68.9
Thhalv10004765m.g Eutrema salsugineum HOM05D006710 ORTHO05D008353 7.4e-66 254.6 245 54.3
FAN14G4294 Fragaria x ananassa HOM05D006710 ORTHO05D008353 7.4e-66 254.6 251 56.6
Lj5g0024082 Lotus japonicus HOM05D006710 ORTHO05D008353 1.3e-65 253.8 229 59.8
BcaNung04366 Brassica carinata HOM05D006710 ORTHO05D008353 2.8e-65 252.7 252 54.8
AL6G39620 Arabidopsis lyrata HOM05D006710 ORTHO05D008353 8.2e-65 251.1 250 53.6
AT5G27390 Arabidopsis thaliana HOM05D006710 ORTHO05D008353 8.2e-65 251.1 253 53.8
Ca_10089_v3 Cicer arietinum L. HOM05D006710 ORTHO05D008353 8.2e-65 251.1 238 56.7
BcaNung02465 Brassica carinata HOM05D006710 ORTHO05D008353 1.1e-64 250.8 250 54.8
Carub.0006s2515 Capsella rubella HOM05D006710 ORTHO05D008353 1.1e-64 250.8 251 54.2
PSO407G0185 Papaver somniferum HOM05D006710 ORTHO05D008353 1.2e-63 247.3 252 54.4
PSO170G1405 Papaver somniferum HOM05D006710 ORTHO05D008353 2.0e-63 246.5 252 54.0
Sp2g20620 Schrenkiella parvula HOM05D006710 ORTHO05D008353 4.5e-63 245.4 251 53.0
CDE08G1170 Ceratophyllum demersum HOM05D006710 ORTHO05D008353 5.9e-63 245.0 251 56.2
Os05g0401300 Oryza sativa ssp. japonica HOM05D006710 ORTHO05D008353 7.7e-63 244.6 263 51.7
Medtr1g082430 Medicago truncatula HOM05D006710 ORTHO05D008353 2.2e-62 243.0 220 57.7
ATR0626G338 Amborella trichopoda HOM05D006710 ORTHO05D008353 6.5e-62 241.5 199 60.8
A06p37590 Brassica napus HOM05D006710 ORTHO05D008353 2.5e-61 239.6 259 51.7
C07p40720 Brassica napus HOM05D006710 ORTHO05D008353 1.6e-60 236.9 262 51.9
BolC7t44600H Brassica oleracea HOM05D006710 ORTHO05D008353 1.6e-60 236.9 262 51.9
HPP92_013667 Vanilla planifolia HOM05D006710 ORTHO05D008353 2.1e-60 236.5 186 63.4
Psat6g148920 Pisum sativum HOM05D006710 ORTHO05D008353 1.0e-59 234.2 234 55.1
Zm00001eb346790 Zea mays HOM05D006710 ORTHO05D008353 2.3e-59 233.0 177 61.0
Gohir.A11G262800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 6.7e-59 231.5 220 59.1
SGA_v2.0_scaffold244G44356 Striga asiatica HOM05D006710 ORTHO05D008353 8.8e-59 231.1 223 54.3
SEGI_09082 Sequoiadendron giganteum HOM05D006710 ORTHO05D008353 1.1e-56 224.2 179 61.5
GSVIVG01000003001 Vitis vinifera HOM05D006710 ORTHO05D008353 3.1e-56 222.6 145 75.2
Aa31LG11G9170 Aethionema arabicum HOM05D006710 ORTHO05D008353 1.2e-55 220.7 279 50.2
Lsat_1_v5_gn_8_116001 Lactuca sativa HOM05D006710 ORTHO05D008353 8.5e-54 214.5 214 54.7
TAR362G0522 Trochodendron aralioides HOM05D006710 ORTHO05D008353 9.4e-53 211.1 145 72.4
BraA06t26678Z Brassica rapa HOM05D006710 ORTHO05D008353 3.4e-50 202.6 238 49.2
CDE02G4396 Ceratophyllum demersum HOM05D000137 ORTHO05D000503 1.9e-45 186.8 160 60.6
FAN05G4701 Fragaria x ananassa HOM05D006710 ORTHO05D008353 3.2e-45 186.0 229 48.9
Glyma.20G231700 Glycine max HOM05D006710 ORTHO05D008353 8.8e-43 177.9 134 65.7
MELO3C004308.2 Cucumis melo HOM05D006710 ORTHO05D008353 1.8e-40 170.2 168 57.1
AagrBONN_evm.TU.Sc2ySwM_368.548 Anthoceros agrestis HOM05D006710 ORTHO05D008353 1.2e-39 167.5 168 47.6
TPR.G327 Trifolium pratense HOM05D006710 ORTHO05D008353 2.7e-39 166.4 165 55.8
Mapoly0057s0090 Marchantia polymorpha HOM05D006710 ORTHO05D008353 1.0e-38 164.5 193 44.0
FvH4_6g05310 Fragaria vesca HOM05D006710 ORTHO05D008353 3.3e-37 159.5 161 55.3
Cc02_g32660 Coffea canephora HOM05D006710 ORTHO05D008353 9.5e-37 157.9 147 61.2
Pp3c11_21800 Physcomitrium patens HOM05D006710 ORTHO05D008353 2.3e-35 153.3 187 42.8
SMO356G0400 Selaginella moellendorffii HOM05D006710 ORTHO05D008353 2.0e-34 150.2 171 46.8
DCAR_022246 Daucus carota HOM05D006710 ORTHO05D008353 1.7e-33 147.1 165 52.1
Cc02_g32640 Coffea canephora HOM05D006710 ORTHO05D008353 1.2e-28 131.0 95 67.4
FAN02G1407 Fragaria x ananassa HOM05D006710 ORTHO05D008353 3.4e-26 122.9 134 53.7
Thecc.05G311300 Theobroma cacao HOM05D000126 ORTHO05D008353 8.3e-25 118.2 68 79.4
EL10Ac7g17500 Beta vulgaris HOM05D006710 ORTHO05D008353 1.2e-23 114.4 93 63.4
CBR_g32459 Chara braunii HOM05D000019 ORTHO05D000353 7.6e-10 68.6 219 25.6
MCO13G061 Micromonas commoda HOM05D006710 ORTHO05D008353 4.9e-09 65.9 128 31.2
Dinv22904 Davidia involucrata HOM05D006710 ORTHO05D008353 6.6e-06 55.5 49 49.0


User provided reference genes

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