Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.06g187070 Amaranthus hybridus HOM05D007055 ORTHO05D008943 3.0e-70 268.5 141 100.0
EL10Ac4g08563 Beta vulgaris HOM05D007055 ORTHO05D008943 8.2e-36 154.1 144 60.4
Hund02291 Selenicereus undatus HOM05D007055 ORTHO05D008943 1.2e-31 140.2 144 56.2
CiPaw.12G045200 Carya illinoinensis HOM05D007055 ORTHO05D008943 2.1e-31 139.4 138 56.5
AUR62044625 Chenopodium quinoa HOM05D007055 ORTHO05D008943 5.1e-30 134.8 86 77.9
Actinidia07345 Actinidia chinensis HOM05D007055 ORTHO05D008943 1.5e-29 133.3 113 60.2
MELO3C010559.2 Cucumis melo HOM05D007055 ORTHO05D008943 1.5e-29 133.3 110 61.8
CsaV3_4G031800 Cucumis sativus L. HOM05D007055 ORTHO05D008943 1.9e-29 132.9 100 66.0
Rhsim06G0238300 Rhododendron simsii HOM05D007055 ORTHO05D008943 2.5e-29 132.5 135 52.6
AUR62043058 Chenopodium quinoa HOM05D007055 ORTHO05D008943 3.3e-29 132.1 167 50.3
ClCG11G016330 Citrullus lanatus HOM05D007055 ORTHO05D008943 3.3e-29 132.1 110 62.7
Sc03g0007920 Simmondsia chinensis HOM05D007055 ORTHO05D008943 3.3e-29 132.1 100 70.0
Cfa019436 Carpinus fangiana HOM05D007055 ORTHO05D008943 4.3e-29 131.7 100 68.0
Sed0014529 Sechium edule HOM05D007055 ORTHO05D008943 9.7e-29 130.6 100 64.0
CSS0027098 Camellia sinensis var. sinensis HOM05D007055 ORTHO05D008943 1.3e-28 130.2 145 52.4
Manes.06G171200 Manihot esculenta HOM05D007055 ORTHO05D008943 1.3e-28 130.2 103 64.1
Glyma.08G173000 Glycine max HOM05D007055 ORTHO05D008943 2.2e-28 129.4 142 51.4
Phvul.005G056000 Phaseolus vulgaris HOM05D007055 ORTHO05D008943 2.8e-28 129.0 102 66.7
Lj3g0013500 Lotus japonicus HOM05D007055 ORTHO05D008943 3.7e-28 128.6 103 63.1
Manes.06G170400 Manihot esculenta HOM05D007055 ORTHO05D008943 4.8e-28 128.3 113 59.3
TWI38G0074 Tripterygium wilfordii HOM05D007055 ORTHO05D008943 6.3e-28 127.9 104 63.5
PGR031G2131 Punica granatum HOM05D007055 ORTHO05D008943 8.2e-28 127.5 95 66.3
Sabra11G0128800 Salix brachista HOM05D007055 ORTHO05D008943 1.4e-27 126.7 100 63.0
Atru.chr12.2186 Acer truncatum HOM05D007055 ORTHO05D008943 1.8e-27 126.3 106 59.4
Psat1g002720 Pisum sativum HOM05D007055 ORTHO05D008943 1.8e-27 126.3 139 52.5
Potri.011G144400 Populus trichocarpa HOM05D007055 ORTHO05D008943 1.8e-27 126.3 109 58.7
arahy.Tifrunner.gnm1.ann1.4D1XNM Arachis hypogaea HOM05D007055 ORTHO05D008943 3.1e-27 125.6 133 54.1
arahy.Tifrunner.gnm1.ann1.FS1PG6 Arachis hypogaea HOM05D007055 ORTHO05D008943 3.1e-27 125.6 137 54.7
COL.COLO4_07385 Corchorus olitorius HOM05D007055 ORTHO05D008943 4.1e-27 125.2 135 52.6
Ca_03690_v3 Cicer arietinum L. HOM05D007055 ORTHO05D008943 5.3e-27 124.8 136 52.9
Duzib168G0293 Durio zibethinus HOM05D007055 ORTHO05D008943 5.3e-27 124.8 99 63.6
Thecc.09G245700 Theobroma cacao HOM05D007055 ORTHO05D008943 9.1e-27 124.0 106 61.3
Aqoxy1G01599 Aquilegia oxysepala HOM05D007055 ORTHO05D008943 1.2e-26 123.6 98 62.2
CANSAT56G2639 Cannabis sativa HOM05D007055 ORTHO05D008943 1.2e-26 123.6 111 57.7
Glyma.15G254500 Glycine max HOM05D007055 ORTHO05D008943 1.2e-26 123.6 118 57.6
Lalb_Chr25g0285111 Lupinus albus HOM05D007055 ORTHO05D008943 1.5e-26 123.2 141 47.5
TAR627G0757 Trochodendron aralioides HOM05D007055 ORTHO05D008943 1.5e-26 123.2 123 54.5
Ciclev10022701m.g Citrus clementina HOM05D007055 ORTHO05D008943 2.6e-26 122.5 121 55.4
Gohir.A05G073500 Gossypium hirsutum HOM05D007055 ORTHO05D008943 3.4e-26 122.1 125 54.4
DCAR_013747 Daucus carota HOM05D007055 ORTHO05D008943 5.9e-26 121.3 127 54.3
MBI18_g28200_MAGBIO Magnolia biondii HOM05D007055 ORTHO05D008943 5.9e-26 121.3 95 66.3
Gohir.D05G076400 Gossypium hirsutum HOM05D007055 ORTHO05D008943 1.0e-25 120.6 121 54.5
Lj5A202T45 Lonicera japonica HOM05D007055 ORTHO05D008943 1.0e-25 120.6 91 68.1
Cc05_g15950 Coffea canephora HOM05D007055 ORTHO05D008943 1.3e-25 120.2 136 46.3
Hma1.2p1_0151F.1_g066890 Hydrangea macrophylla HOM05D007055 ORTHO05D008943 1.3e-25 120.2 91 64.8
Gorai.009G077700 Gossypium raimondii HOM05D007055 ORTHO05D008943 1.7e-25 119.8 117 55.6
Medtr2g069750 Medicago truncatula HOM05D007055 ORTHO05D008943 1.7e-25 119.8 133 51.9
PSO541G2194 Papaver somniferum HOM05D007055 ORTHO05D008943 2.2e-25 119.4 93 62.4
PSO675G8693 Papaver somniferum HOM05D007055 ORTHO05D008943 2.2e-25 119.4 93 62.4
Potri.008G043200 Populus trichocarpa HOM05D007055 ORTHO05D008943 2.2e-25 119.4 98 60.2
FvH4_3g16000 Fragaria vesca HOM05D007055 ORTHO05D008943 2.9e-25 119.0 95 61.1
FAN11G2295 Fragaria x ananassa HOM05D007055 ORTHO05D008943 2.9e-25 119.0 95 61.1
FAN21G0096 Fragaria x ananassa HOM05D007055 ORTHO05D008943 2.9e-25 119.0 95 61.1
PGSC0003DMG400022130 Solanum tuberosum HOM05D007055 ORTHO05D008943 2.9e-25 119.0 126 52.4
FAN16G3461 Fragaria x ananassa HOM05D007055 ORTHO05D008943 6.5e-25 117.9 97 58.8
HanXRQChr13g0408571 Helianthus annuus HOM05D007055 ORTHO05D008943 6.5e-25 117.9 91 63.7
Oeu002805.1 Olea europaea HOM05D007055 ORTHO05D008943 6.5e-25 117.9 93 62.4
Solyc07g066370.3 Solanum lycopersicum HOM05D007055 ORTHO05D008943 6.5e-25 117.9 105 58.1
Sopen07g034550 Solanum pennellii HOM05D007055 ORTHO05D008943 6.5e-25 117.9 105 57.1
Lsat_1_v5_gn_7_72120 Lactuca sativa HOM05D007055 ORTHO05D008943 8.5e-25 117.5 129 50.4
FAN21G3903 Fragaria x ananassa HOM05D007055 ORTHO05D008943 1.1e-24 117.1 95 60.0
Nn7g37868 Nelumbo nucifera HOM05D007055 ORTHO05D008943 1.1e-24 117.1 127 50.4
RcHm_v2.0_Chr5g0026941 Rosa chinensis HOM05D007055 ORTHO05D008943 1.4e-24 116.7 94 60.6
Sp5g34120 Schrenkiella parvula HOM05D007055 ORTHO05D008943 1.9e-24 116.3 125 49.6
CARHR072740 Cardamine hirsuta HOM05D007055 ORTHO05D008943 2.5e-24 115.9 126 52.4
GSVIVG01020441001 Vitis vinifera HOM05D007055 ORTHO05D008943 2.5e-24 115.9 91 67.0
AT1G79070 Arabidopsis thaliana HOM05D007055 ORTHO05D008943 3.2e-24 115.5 137 48.9
A07p44210 Brassica napus HOM05D007055 ORTHO05D008943 4.2e-24 115.2 130 49.2
ECA240G0655 Erigeron canadensis HOM05D007055 ORTHO05D008943 4.2e-24 115.2 107 57.0
ATR1098G113 Amborella trichopoda HOM05D007055 ORTHO05D008943 7.2e-24 114.4 100 58.0
SalBow5G4782 Salvia bowleyana HOM05D000091 ORTHO05D003024 7.2e-24 114.4 95 60.0
BraA07t31929Z Brassica rapa HOM05D007055 ORTHO05D008943 9.4e-24 114.0 127 49.6
AL2G39530 Arabidopsis lyrata HOM05D007055 ORTHO05D008943 1.6e-23 113.2 137 48.2
Thhalv10019307m.g Eutrema salsugineum HOM05D007055 ORTHO05D008943 1.6e-23 113.2 124 50.8
MSTRG.22977 Avicennia marina HOM05D007055 ORTHO05D008943 2.1e-23 112.8 91 60.4
BcaB02g08664 Brassica carinata HOM05D007055 ORTHO05D008943 2.7e-23 112.5 104 55.8
CAN.G943.31 Capsicum annuum HOM05D007055 ORTHO05D008943 3.6e-23 112.1 114 53.5
MD05G1216100 Malus domestica HOM05D007055 ORTHO05D008943 4.6e-23 111.7 124 50.8
Peaxi162Scf00232g01121 Petunia axillaris HOM05D007055 ORTHO05D008943 4.6e-23 111.7 115 51.3
THA.LOC104808116 Tarenaya hassleriana HOM05D007055 ORTHO05D008943 4.6e-23 111.7 127 46.5
BolC6t40312H Brassica oleracea HOM05D007055 ORTHO05D008943 7.9e-23 110.9 98 56.1
Manes.06G169900 Manihot esculenta HOM05D007055 ORTHO05D008943 7.9e-23 110.9 130 46.9
C06p52940 Brassica napus HOM05D007055 ORTHO05D008943 1.0e-22 110.5 99 54.5
Manes.06G170801 Manihot esculenta HOM05D007055 ORTHO05D008943 1.4e-22 110.2 100 57.0
SGA_v2.0_scaffold2G00966 Striga asiatica HOM05D007055 ORTHO05D008943 1.8e-22 109.8 113 50.4
BcaC08g47470 Brassica carinata HOM05D007055 ORTHO05D008943 2.3e-22 109.4 98 55.1
BcaNung04909 Brassica carinata HOM05D007055 ORTHO05D008943 2.3e-22 109.4 96 57.3
Duzib150G0143 Durio zibethinus HOM05D007055 ORTHO05D008943 5.1e-22 108.2 81 70.4
Migut.H02189 Erythranthe guttata HOM05D007055 ORTHO05D008943 6.7e-22 107.8 114 48.2
Carub.0002s2594 Capsella rubella HOM05D007055 ORTHO05D008943 1.1e-21 107.1 94 57.4
Aa31LG4G1920 Aethionema arabicum HOM05D007055 ORTHO05D008943 1.5e-21 106.7 97 56.7
Nitab4.5_0001749g0090 Nicotiana tabacum HOM05D007055 ORTHO05D008943 5.7e-21 104.8 151 42.4
Prupe.4G143100 Prunus persica HOM05D007055 ORTHO05D008943 9.7e-21 104.0 128 46.1
Eucgr.F03184 Eucalyptus grandis HOM05D007055 ORTHO05D008943 1.7e-20 103.2 104 50.0
Pp3c15_3290 Physcomitrium patens HOM05D007055 ORTHO05D008943 4.8e-20 101.7 118 47.5
HPP92_002254 Vanilla planifolia HOM05D007055 ORTHO05D008943 1.4e-19 100.1 77 64.9
Manes.06G170100 Manihot esculenta HOM05D007055 ORTHO05D008943 4.1e-19 98.6 85 61.2
unitig_699.g19681 Utricularia gibba HOM05D007055 ORTHO05D008943 4.1e-19 98.6 101 49.5
CDE12G0729 Ceratophyllum demersum HOM05D007055 ORTHO05D008943 9.1e-19 97.4 93 51.6
BcaC08g45387 Brassica carinata HOM05D007055 ORTHO05D008943 1.2e-18 97.1 107 47.7
TPR.G9749 Trifolium pratense HOM05D007055 ORTHO05D008943 2.9e-17 92.4 71 69.0
Manes.06G171100 Manihot esculenta HOM05D007055 ORTHO05D008943 8.5e-17 90.9 75 64.0
SHI01886 Sapria himalayana HOM05D007055 ORTHO05D008943 2.5e-16 89.4 89 52.8
vmacro11656 Vaccinium macrocarpon HOM05D007055 ORTHO05D008943 5.5e-16 88.2 70 64.3
Mapoly0112s0058 Marchantia polymorpha HOM05D007055 ORTHO05D008943 1.2e-15 87.0 96 46.9
CBR_g41533 Chara braunii HOM05D000019 ORTHO05D000048 2.7e-15 85.9 102 41.2
Os08g0129900 Oryza sativa ssp. japonica HOM05D007055 ORTHO05D008943 2.7e-15 85.9 100 45.0
SalBow5G1530 Salvia bowleyana HOM05D000091 ORTHO05D003024 3.9e-14 82.0 71 57.7
Zm00001eb173230 Zea mays HOM05D007055 ORTHO05D008943 3.3e-13 79.0 89 40.4
AagrBONN_evm.TU.Sc2ySwM_228.2782 Anthoceros agrestis HOM05D007055 ORTHO05D008943 5.7e-13 78.2 99 41.4
Nitab4.5_0007742g0030 Nicotiana tabacum HOM05D007055 ORTHO05D008943 9.7e-13 77.4 118 43.2
SMO367G1177 Selaginella moellendorffii HOM05D007055 ORTHO05D008943 2.0e-10 69.7 96 41.7


User provided reference genes

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