Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.06g184680 Amaranthus hybridus HOM05D001811 ORTHO05D059958 1.9e-187 659.1 340 100.0
Ah.06g184670 Amaranthus hybridus HOM05D004705 ORTHO05D005595 1.1e-38 164.9 101 87.1
Ah.10g034640 Amaranthus hybridus HOM05D004712 ORTHO05D005306 6.4e-26 122.5 84 73.8
AUR62040204 Chenopodium quinoa HOM05D001811 ORTHO05D001738 9.2e-17 92.0 82 58.5
AUR62009207 Chenopodium quinoa HOM05D001811 ORTHO05D001738 2.7e-16 90.5 82 58.5
Sc09g0009590 Simmondsia chinensis HOM05D001811 ORTHO05D001738 5.2e-12 76.3 82 47.6
Dinv23415 Davidia involucrata HOM05D001811 ORTHO05D001738 3.4e-11 73.6 82 47.6
CSS0025180 Camellia sinensis var. sinensis HOM05D001811 ORTHO05D001738 7.5e-11 72.4 82 47.6
Actinidia18202 Actinidia chinensis HOM05D001811 ORTHO05D001738 1.3e-10 71.6 82 46.3
Cfa017920 Carpinus fangiana HOM05D001811 ORTHO05D001738 1.7e-10 71.2 82 45.1
Actinidia14696 Actinidia chinensis HOM05D001811 ORTHO05D001738 2.9e-10 70.5 82 46.3
Haze_18229 Corylus avellana HOM05D001811 ORTHO05D001738 2.9e-10 70.5 82 45.1
TAR636G0675 Trochodendron aralioides HOM05D001811 ORTHO05D001738 2.9e-10 70.5 82 47.6
EL10Ac2g03951 Beta vulgaris HOM05D001811 ORTHO05D001738 8.3e-10 68.9 82 46.3
Atru.chr7.2033 Acer truncatum HOM05D001811 ORTHO05D001738 1.4e-09 68.2 82 42.7
MD08G1074500 Malus domestica HOM05D001811 ORTHO05D001738 1.4e-09 68.2 82 42.7
Dinv27955 Davidia involucrata HOM05D001811 ORTHO05D001738 1.9e-09 67.8 83 44.6
Hund03368 Selenicereus undatus HOM05D001811 ORTHO05D001738 1.9e-09 67.8 82 46.3
CSS0014115 Camellia sinensis var. sinensis HOM05D001811 ORTHO05D001738 3.2e-09 67.0 82 43.9
TAR383G1022 Trochodendron aralioides HOM05D001811 ORTHO05D001738 1.2e-08 65.1 82 43.9
Oeu064100.1 Olea europaea HOM05D001811 ORTHO05D001738 2.1e-08 64.3 85 44.7
vmacro05272 Vaccinium macrocarpon HOM05D001811 ORTHO05D001738 2.7e-08 63.9 82 43.9
Rhsim07G0144500 Rhododendron simsii HOM05D001811 ORTHO05D001738 4.6e-08 63.2 82 42.7
GSVIVG01035335001 Vitis vinifera HOM05D001811 ORTHO05D001738 4.6e-08 63.2 80 43.8
Ah.13g075640 Amaranthus hybridus HOM05D000240 ORTHO05D001153 7.8e-08 62.4 56 64.3
Lj7C695G10 Lonicera japonica HOM05D001811 ORTHO05D001738 1.0e-07 62.0 82 45.1
Ca_13195_v3 Cicer arietinum L. HOM05D001811 ORTHO05D001738 1.3e-07 61.6 103 40.8
Ah.07g201010 Amaranthus hybridus HOM05D000990 ORTHO05D000810 1.7e-07 61.2 40 80.0
TAR626G0271 Trochodendron aralioides HOM05D001811 ORTHO05D001738 1.7e-07 61.2 82 46.3
Nitab4.5_0001107g0060 Nicotiana tabacum HOM05D001811 ORTHO05D001738 3.0e-07 60.5 82 41.5
Peaxi162Scf00247g00515 Petunia axillaris HOM05D001811 ORTHO05D001738 3.0e-07 60.5 82 41.5
CANSAT25G2568 Cannabis sativa HOM05D001811 ORTHO05D001738 3.9e-07 60.1 78 43.6
Nitab4.5_0000664g0090 Nicotiana tabacum HOM05D001811 ORTHO05D001738 3.9e-07 60.1 82 41.5
Phvul.001G032700 Phaseolus vulgaris HOM05D001811 ORTHO05D001738 5.1e-07 59.7 103 40.8
Potri.006G234100 Populus trichocarpa HOM05D001811 ORTHO05D001738 5.1e-07 59.7 82 39.0
SalBow4G1043 Salvia bowleyana HOM05D001811 ORTHO05D001738 5.1e-07 59.7 83 45.8
VMungo0647G1040 Vigna mungo HOM05D001811 ORTHO05D001738 5.1e-07 59.7 100 41.0
CAN.G309.60 Capsicum annuum HOM05D001811 ORTHO05D001738 6.6e-07 59.3 96 42.7
Sopen11g028780 Solanum pennellii HOM05D001811 ORTHO05D001738 8.6e-07 58.9 82 42.7
FAN15G1805 Fragaria x ananassa HOM05D001811 ORTHO05D001738 1.1e-06 58.5 81 40.7
QL02p001781 Quercus lobata HOM05D001811 ORTHO05D001738 1.1e-06 58.5 92 39.1
TWI32G0287 Tripterygium wilfordii HOM05D001811 ORTHO05D001738 1.1e-06 58.5 86 36.0
CAN.G20.7 Capsicum annuum HOM05D001811 ORTHO05D001738 1.5e-06 58.2 75 45.3
Solyc11g070110.3 Solanum lycopersicum HOM05D001811 ORTHO05D001738 1.5e-06 58.2 82 42.7
FAN24G0718 Fragaria x ananassa HOM05D001811 ORTHO05D001738 1.9e-06 57.8 81 42.0
PGSC0003DMG400018578 Solanum tuberosum HOM05D001811 ORTHO05D001738 1.9e-06 57.8 82 41.5
Duzib168G1073 Durio zibethinus HOM05D001811 ORTHO05D001738 2.5e-06 57.4 77 40.3
Glyma.14G091600 Glycine max HOM05D001811 ORTHO05D001738 2.5e-06 57.4 103 39.8
CiPaw.15G042800 Carya illinoinensis HOM05D001811 ORTHO05D001738 3.3e-06 57.0 81 39.5
FAN27G1939 Fragaria x ananassa HOM05D001811 ORTHO05D001738 3.3e-06 57.0 81 39.5
Medtr1g016980 Medicago truncatula HOM05D001811 ORTHO05D001738 3.3e-06 57.0 103 37.9
Migut.A00162 Erythranthe guttata HOM05D001811 ORTHO05D001738 4.3e-06 56.6 82 40.2
Glyma.17G231800 Glycine max HOM05D001811 ORTHO05D001738 4.3e-06 56.6 103 39.8
Nn8g38975 Nelumbo nucifera HOM05D001811 ORTHO05D001738 4.3e-06 56.6 76 43.4
PGSC0003DMG401013835 Solanum tuberosum HOM05D001811 ORTHO05D001738 4.3e-06 56.6 75 45.3
AL6G22440 Arabidopsis lyrata HOM05D001811 ORTHO05D001738 5.6e-06 56.2 82 39.0
Psat6g019160 Pisum sativum HOM05D001811 ORTHO05D001738 5.6e-06 56.2 80 38.8
Solyc08g065890.3 Solanum lycopersicum HOM05D001811 ORTHO05D001738 5.6e-06 56.2 83 39.8
TPR.G13050 Trifolium pratense HOM05D001811 ORTHO05D001738 5.6e-06 56.2 90 38.9
Eucgr.C00627 Eucalyptus grandis HOM05D001811 ORTHO05D001738 7.3e-06 55.8 82 42.7
Nn6g35375 Nelumbo nucifera HOM05D001811 ORTHO05D001738 7.3e-06 55.8 84 39.3
Sabra06G0182300 Salix brachista HOM05D001811 ORTHO05D001738 7.3e-06 55.8 82 37.8
SGA_v2.0_scaffold251G45049 Striga asiatica HOM05D001811 ORTHO05D001738 7.3e-06 55.8 106 41.5


User provided reference genes

Program Settings