Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.06g184600 Amaranthus hybridus HOM05D005607 ORTHO05D008142 2.6e-270 934.9 496 100.0
EL10Ac4g08241 Beta vulgaris HOM05D005607 ORTHO05D008142 2.5e-196 689.1 521 73.3
Sc16g0007180 Simmondsia chinensis HOM05D005607 ORTHO05D008142 1.9e-167 593.2 528 60.4
TWI38G0301 Tripterygium wilfordii HOM05D005607 ORTHO05D008142 5.8e-161 571.6 526 58.6
GSVIVG01014288001 Vitis vinifera HOM05D005607 ORTHO05D008142 1.1e-159 567.4 527 58.6
CSS0008326 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 2.4e-159 566.2 526 58.6
Cfa020607 Carpinus fangiana HOM05D005607 ORTHO05D008142 3.5e-158 562.4 526 58.0
Thecc.07G096400 Theobroma cacao HOM05D005607 ORTHO05D008142 4.6e-158 562.0 525 58.5
Prupe.4G175900 Prunus persica HOM05D005607 ORTHO05D008142 1.0e-157 560.8 527 58.3
COL.COLO4_36717 Corchorus olitorius HOM05D005607 ORTHO05D008142 3.0e-157 559.3 525 57.9
Rhsim06G0202700 Rhododendron simsii HOM05D005607 ORTHO05D008142 6.6e-157 558.1 541 57.1
Eucgr.F01169 Eucalyptus grandis HOM05D005607 ORTHO05D008142 9.5e-156 554.3 526 58.4
Gohir.A04G035700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 4.7e-155 552.0 525 57.0
MD03G1232700 Malus domestica HOM05D005607 ORTHO05D008142 8.1e-155 551.2 527 58.1
Ciclev10007885m.g Citrus clementina HOM05D005607 ORTHO05D008142 1.4e-154 550.4 525 58.1
Gohir.D05G347700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 6.8e-154 548.1 525 56.2
Gorai.009G375500 Gossypium raimondii HOM05D005607 ORTHO05D008142 8.9e-154 547.7 525 56.4
Dinv20204 Davidia involucrata HOM05D005607 ORTHO05D008142 1.2e-153 547.4 526 58.0
Lj3g0025006 Lotus japonicus HOM05D005607 ORTHO05D008142 3.4e-153 545.8 523 57.7
CsaV3_4G033450 Cucumis sativus L. HOM05D005607 ORTHO05D008142 4.4e-153 545.4 527 56.0
CiPaw.11G167700 Carya illinoinensis HOM05D005607 ORTHO05D008142 7.6e-153 544.7 526 57.6
arahy.Tifrunner.gnm1.ann1.K8QLTQ Arachis hypogaea HOM05D005607 ORTHO05D008142 1.7e-152 543.5 526 56.5
Sed0013999 Sechium edule HOM05D005607 ORTHO05D008142 2.2e-152 543.1 527 56.0
Ca_23036_v3 Cicer arietinum L. HOM05D005607 ORTHO05D008142 3.8e-152 542.3 521 57.8
Nn1g04204 Nelumbo nucifera HOM05D005607 ORTHO05D008142 1.9e-151 540.0 527 57.5
MELO3C025610.2 Cucumis melo HOM05D005607 ORTHO05D008142 3.2e-151 539.3 527 55.8
ClCG11G017810 Citrullus lanatus HOM05D005607 ORTHO05D008142 5.4e-151 538.5 541 54.7
vmacro11890 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 5.4e-151 538.5 549 54.6
Glyma.06G236100 Glycine max HOM05D005607 ORTHO05D008142 1.6e-150 537.0 525 56.2
Medtr8g058790 Medicago truncatula HOM05D005607 ORTHO05D008142 1.6e-150 537.0 530 56.4
Medtr8g061280 Medicago truncatula HOM05D005607 ORTHO05D008142 1.6e-150 537.0 530 56.4
vmacro23190 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 2.1e-150 536.6 549 54.5
Cpa.g.sc131.86 Carica papaya HOM05D005607 ORTHO05D008142 4.6e-150 535.4 525 55.8
Sabra16G0259600 Salix brachista HOM05D005607 ORTHO05D008142 7.8e-150 534.6 528 57.2
FvH4_3g19420 Fragaria vesca HOM05D005607 ORTHO05D008142 1.7e-149 533.5 526 57.2
Actinidia31524 Actinidia chinensis HOM05D005607 ORTHO05D008142 5.1e-149 531.9 510 57.5
Nitab4.5_0008275g0010 Nicotiana tabacum HOM05D005607 ORTHO05D008142 6.6e-149 531.6 527 56.2
PGR083G1887 Punica granatum HOM05D005607 ORTHO05D008142 1.1e-148 530.8 526 56.8
Duzib213G0871 Durio zibethinus HOM05D005607 ORTHO05D008142 1.5e-148 530.4 495 57.6
Nitab4.5_0002330g0110 Nicotiana tabacum HOM05D005607 ORTHO05D008142 1.9e-148 530.0 527 56.5
Lsat_1_v5_gn_7_104480 Lactuca sativa HOM05D005607 ORTHO05D008142 5.6e-148 528.5 526 54.9
Potri.001G396500 Populus trichocarpa HOM05D005607 ORTHO05D008142 7.3e-148 528.1 528 56.4
RcHm_v2.0_Chr5g0032701 Rosa chinensis HOM05D005607 ORTHO05D008142 2.8e-147 526.2 526 56.8
arahy.Tifrunner.gnm1.ann1.3D346W Arachis hypogaea HOM05D005607 ORTHO05D008142 4.7e-147 525.4 527 55.4
ECA236G2999 Erigeron canadensis HOM05D005607 ORTHO05D008142 4.7e-147 525.4 526 54.2
CAN.G162.36 Capsicum annuum HOM05D005607 ORTHO05D008142 1.5e-145 520.4 527 55.6
Manes.03G105800 Manihot esculenta HOM05D005607 ORTHO05D008142 9.9e-145 517.7 526 54.0
Sopen07g031060 Solanum pennellii HOM05D005607 ORTHO05D008142 9.9e-145 517.7 526 55.5
Cc05_g11730 Coffea canephora HOM05D005607 ORTHO05D008142 3.8e-144 515.8 527 55.8
TPR.G28174 Trifolium pratense HOM05D005607 ORTHO05D008142 3.8e-144 515.8 524 55.3
HanXRQChr15g0495421 Helianthus annuus HOM05D005607 ORTHO05D008142 1.4e-143 513.8 525 53.9
Lalb_Chr19g0134061 Lupinus albus HOM05D005607 ORTHO05D008142 1.4e-143 513.8 524 55.0
Atru.chr2.2407 Acer truncatum HOM05D005607 ORTHO05D008142 3.2e-143 512.7 524 54.2
FAN16G0865 Fragaria x ananassa HOM05D005607 ORTHO05D008142 3.2e-143 512.7 540 55.0
CANSAT35G0745 Cannabis sativa HOM05D005607 ORTHO05D008142 4.2e-143 512.3 527 54.8
AUR62019473 Chenopodium quinoa HOM05D005607 ORTHO05D008142 1.2e-142 510.8 556 57.7
MSTRG.12893 Avicennia marina HOM05D005607 ORTHO05D008142 3.5e-142 509.2 527 54.5
THA.LOC104815562 Tarenaya hassleriana HOM05D005607 ORTHO05D008142 1.0e-141 507.7 526 52.5
CSS0003695 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 2.3e-141 506.5 538 53.9
Haze_09409 Corylus avellana HOM05D005607 ORTHO05D008142 6.6e-141 505.0 568 51.4
AUR62036159 Chenopodium quinoa HOM05D005607 ORTHO05D008142 1.9e-140 503.4 526 60.1
DCAR_017123 Daucus carota HOM05D005607 ORTHO05D008142 3.6e-139 499.2 560 50.7
Oeu005401.4 Olea europaea HOM05D005607 ORTHO05D008142 4.8e-139 498.8 644 47.7
PSO832G0774 Papaver somniferum HOM05D005607 ORTHO05D008142 1.8e-138 496.9 526 52.7
Eucgr.F01141 Eucalyptus grandis HOM05D005607 ORTHO05D008142 9.0e-138 494.6 524 53.4
Eucgr.F00890 Eucalyptus grandis HOM05D005607 ORTHO05D008142 7.6e-137 491.5 500 55.4
PSO210G5410 Papaver somniferum HOM05D005607 ORTHO05D008142 7.6e-137 491.5 526 52.7
AL3G27570 Arabidopsis lyrata HOM05D005607 ORTHO05D008142 1.3e-136 490.7 519 52.2
Carub.0003s1483 Capsella rubella HOM05D005607 ORTHO05D008142 3.2e-135 486.1 519 51.6
MD11G1253400 Malus domestica HOM05D005607 ORTHO05D008142 2.1e-134 483.4 465 57.2
Sp3g13390 Schrenkiella parvula HOM05D005607 ORTHO05D008142 3.5e-134 482.6 525 51.2
AT3G15180 Arabidopsis thaliana HOM05D005607 ORTHO05D008142 7.9e-134 481.5 519 51.1
VMungo1127G0827 Vigna mungo HOM05D005607 ORTHO05D008142 5.1e-133 478.8 524 52.1
Thhalv10020515m.g Eutrema salsugineum HOM05D005607 ORTHO05D008142 5.6e-132 475.3 519 50.7
BraA05t22250Z Brassica rapa HOM05D005607 ORTHO05D008142 9.6e-132 474.6 519 50.7
ATR0737G117 Amborella trichopoda HOM05D005607 ORTHO05D008142 7.6e-129 464.9 519 50.9
A05p34290 Brassica napus HOM05D005607 ORTHO05D008142 1.9e-127 460.3 546 48.2
BolC5t33890H Brassica oleracea HOM05D005607 ORTHO05D008142 1.9e-127 460.3 529 48.8
CDE10G0361 Ceratophyllum demersum HOM05D005607 ORTHO05D008142 3.2e-127 459.5 519 49.7
Hund02235 Selenicereus undatus HOM05D005607 ORTHO05D008142 5.5e-127 458.8 411 62.8
C05p52050 Brassica napus HOM05D005607 ORTHO05D008142 9.3e-127 458.0 545 47.7
Aa31LG8G2380 Aethionema arabicum HOM05D005607 ORTHO05D008142 4.6e-126 455.7 530 49.1
Aqoxy4G00691 Aquilegia oxysepala HOM05D005607 ORTHO05D008142 4.6e-126 455.7 468 53.6
BcaB06g29542 Brassica carinata HOM05D005607 ORTHO05D008142 8.2e-123 444.9 519 48.7
SGA_v2.0_scaffold130G34350 Striga asiatica HOM05D005607 ORTHO05D008142 4.0e-122 442.6 575 48.0
Zm00001eb295460 Zea mays HOM05D005607 ORTHO05D008142 6.7e-117 425.2 521 44.1
Duzib170G0139 Durio zibethinus HOM05D005607 ORTHO05D008142 8.7e-117 424.9 525 48.0
Os05g0557200 Oryza sativa ssp. japonica HOM05D005607 ORTHO05D008142 2.8e-115 419.9 515 44.3
Psat7g207160 Pisum sativum HOM05D005607 ORTHO05D008142 1.2e-113 414.5 419 54.7
Phvul.011G160300 Phaseolus vulgaris HOM05D005607 ORTHO05D008142 2.3e-109 400.2 451 51.2
Migut.H01958 Erythranthe guttata HOM05D005607 ORTHO05D008142 2.2e-107 393.7 448 51.1
Lj1A839T37 Lonicera japonica HOM05D005607 ORTHO05D008142 2.1e-102 377.1 390 54.6
Peaxi162Scf00069g01839 Petunia axillaris HOM05D005607 ORTHO05D008142 3.0e-93 346.7 329 57.4
Solyc07g062860.3 Solanum lycopersicum HOM05D005607 ORTHO05D008142 2.2e-91 340.5 344 54.4
Lj1A839T35 Lonicera japonica HOM05D005607 ORTHO05D008142 4.5e-89 332.8 408 50.2
Pp3c1_12630 Physcomitrium patens HOM05D005607 ORTHO05D008142 2.5e-71 273.9 532 33.6
AagrBONN_evm.TU.Sc2ySwM_344.1287 Anthoceros agrestis HOM05D005607 ORTHO05D008142 1.8e-69 267.7 513 33.5
unitig_749.g13531 Utricularia gibba HOM05D005607 ORTHO05D008142 7.0e-66 255.8 425 41.4
SMO139G0024 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 4.5e-65 253.1 528 33.5
FAN11G3919 Fragaria x ananassa HOM05D005607 ORTHO05D008142 5.0e-64 249.6 268 53.0
QL08p023962 Quercus lobata HOM05D005607 ORTHO05D008142 5.0e-64 249.6 235 57.9
SalBow7G3213 Salvia bowleyana HOM05D005607 ORTHO05D008142 1.8e-61 241.1 291 50.5
SalBow7G3521 Salvia bowleyana HOM05D005607 ORTHO05D008142 1.8e-61 241.1 291 50.5
MBI06_g04182_MAGBIO Magnolia biondii HOM05D005607 ORTHO05D008142 1.2e-57 228.4 345 43.5
PGSC0003DMG400012404 Solanum tuberosum HOM05D005607 ORTHO05D008142 2.9e-51 207.2 183 56.8
CARHR090160 Cardamine hirsuta HOM05D005607 ORTHO05D008142 1.7e-48 198.0 228 46.1
QL08p023973 Quercus lobata HOM05D005607 ORTHO05D008142 3.9e-48 196.8 163 65.0
Glyma.12G162201 Glycine max HOM05D005607 ORTHO05D008142 5.0e-48 196.4 164 64.6
Peaxi162Scf00069g01838 Petunia axillaris HOM05D005607 ORTHO05D008142 1.9e-47 194.5 164 64.0
MD11G1279000 Malus domestica HOM05D005607 ORTHO05D008142 3.4e-44 183.7 265 45.3
SMO145G0057 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 1.4e-42 178.3 466 29.6
QL08p023949 Quercus lobata HOM05D005607 ORTHO05D008142 1.3e-32 145.2 100 69.0
FAN25G1444 Fragaria x ananassa HOM05D005607 ORTHO05D008142 3.0e-32 144.1 111 64.0
SEGI_34734 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 1.1e-29 135.6 124 57.3
CBR_g2884 Chara braunii HOM05D005607 ORTHO05D008142 6.6e-24 116.3 290 31.4
EL10Ac6g14983 Beta vulgaris HOM05D005607 ORTHO05D008142 8.1e-22 109.4 104 59.6
SEGI_17376 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 6.4e-19 99.8 135 40.0
MELO3C033904.2 Cucumis melo HOM05D005607 ORTHO05D008142 2.8e-14 84.3 95 46.3


User provided reference genes

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