Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.06g184430 Amaranthus hybridus HOM05D006845 ORTHO05D009300 1.3e-279 965.7 478 100.0
AUR62019438 Chenopodium quinoa HOM05D006845 ORTHO05D009300 4.2e-193 678.3 413 79.7
AUR62039192 Chenopodium quinoa HOM05D006845 ORTHO05D009300 7.5e-190 667.5 413 78.7
EL10Ac4g08199 Beta vulgaris HOM05D006845 ORTHO05D009300 1.9e-185 652.9 413 75.5
Thecc.07G091800 Theobroma cacao HOM05D006845 ORTHO05D009300 2.5e-177 625.9 412 72.1
CSS0022560 Camellia sinensis var. sinensis HOM05D006845 ORTHO05D009300 3.2e-177 625.5 423 70.7
GSVIVG01014313001 Vitis vinifera HOM05D006845 ORTHO05D009300 9.4e-177 624.0 413 72.6
ClCG11G018010 Citrullus lanatus HOM05D006845 ORTHO05D009300 6.1e-176 621.3 419 69.9
Gohir.D08G031900 Gossypium hirsutum HOM05D006845 ORTHO05D009300 8.0e-176 620.9 412 71.8
PGR083G0376 Punica granatum HOM05D006845 ORTHO05D009300 6.8e-175 617.8 412 71.4
Gohir.A08G021200 Gossypium hirsutum HOM05D006845 ORTHO05D009300 1.5e-174 616.7 412 71.4
Gorai.004G029400 Gossypium raimondii HOM05D006845 ORTHO05D009300 9.8e-174 614.0 412 71.1
Eucgr.F01150 Eucalyptus grandis HOM05D006845 ORTHO05D009300 1.7e-173 613.2 423 69.3
TAR627G0110 Trochodendron aralioides HOM05D006845 ORTHO05D009300 6.3e-173 611.3 404 71.3
Dinv14926 Davidia involucrata HOM05D006845 ORTHO05D009300 8.3e-173 610.9 404 71.8
Ciclev10008389m.g Citrus clementina HOM05D006845 ORTHO05D009300 1.1e-172 610.5 423 68.3
Potri.011G118000 Populus trichocarpa HOM05D006845 ORTHO05D009300 1.1e-172 610.5 412 69.7
Solyc12g013890.2 Solanum lycopersicum HOM05D006845 ORTHO05D009300 1.1e-172 610.5 404 71.3
CiPaw.11G170600 Carya illinoinensis HOM05D006845 ORTHO05D009300 1.4e-172 610.1 410 70.7
Sopen12g007210 Solanum pennellii HOM05D006845 ORTHO05D009300 1.4e-172 610.1 404 71.0
Hma1.2p1_0898F.1_g234490 Hydrangea macrophylla HOM05D006845 ORTHO05D009300 1.8e-172 609.8 404 70.5
Potri.001G398900 Populus trichocarpa HOM05D006845 ORTHO05D009300 7.0e-172 607.8 411 69.8
COL.COLO4_27185 Corchorus olitorius HOM05D006845 ORTHO05D009300 1.3e-170 603.6 412 69.2
Sed0008037 Sechium edule HOM05D006845 ORTHO05D009300 1.7e-170 603.2 423 67.6
QL08p022228 Quercus lobata HOM05D006845 ORTHO05D009300 6.6e-170 601.3 414 69.1
Cfa020572 Carpinus fangiana HOM05D006845 ORTHO05D009300 1.1e-169 600.5 412 70.1
Nn1g06500 Nelumbo nucifera HOM05D006845 ORTHO05D009300 1.5e-169 600.1 412 69.4
CsaV3_4G033630 Cucumis sativus L. HOM05D006845 ORTHO05D009300 1.9e-169 599.7 412 68.9
Prupe.4G179900 Prunus persica HOM05D006845 ORTHO05D009300 2.5e-169 599.4 411 69.1
RcHm_v2.0_Chr5g0033181 Rosa chinensis HOM05D006845 ORTHO05D009300 2.5e-169 599.4 414 69.1
Atru.chr2.2481 Acer truncatum HOM05D006845 ORTHO05D009300 3.3e-169 599.0 418 67.9
FvH4_3g19780 Fragaria vesca HOM05D006845 ORTHO05D009300 9.5e-169 597.4 411 68.9
CANSAT56G3540 Cannabis sativa HOM05D006845 ORTHO05D009300 2.1e-168 596.3 425 66.1
Manes.15G087900 Manihot esculenta HOM05D006845 ORTHO05D009300 2.8e-168 595.9 411 69.1
CAN.G213.11 Capsicum annuum HOM05D006845 ORTHO05D009300 4.7e-168 595.1 426 68.1
PSO541G3085 Papaver somniferum HOM05D006845 ORTHO05D009300 2.3e-167 592.8 412 67.2
PSO675G5588 Papaver somniferum HOM05D006845 ORTHO05D009300 2.3e-167 592.8 412 67.2
HanXRQChr12g0364151 Helianthus annuus HOM05D006845 ORTHO05D009300 4.0e-167 592.0 412 67.5
AL8G28920 Arabidopsis lyrata HOM05D006845 ORTHO05D009300 6.8e-167 591.3 414 67.9
Carub.0008s1415 Capsella rubella HOM05D006845 ORTHO05D009300 6.8e-167 591.3 414 66.9
MELO3C016692.2 Cucumis melo HOM05D006845 ORTHO05D009300 6.8e-167 591.3 398 68.6
FAN11G1119 Fragaria x ananassa HOM05D006845 ORTHO05D009300 8.9e-167 590.9 418 68.2
Lalb_Chr25g0286311 Lupinus albus HOM05D006845 ORTHO05D009300 2.0e-166 589.7 405 68.1
MSTRG.14352 Avicennia marina HOM05D006845 ORTHO05D009300 2.6e-166 589.3 404 67.8
Nitab4.5_0000332g0060 Nicotiana tabacum HOM05D006845 ORTHO05D009300 3.4e-166 589.0 453 63.8
AT5G53860 Arabidopsis thaliana HOM05D006845 ORTHO05D009300 5.7e-166 588.2 414 67.6
Glyma.12G225400 Glycine max HOM05D006845 ORTHO05D009300 5.7e-166 588.2 413 67.3
MD11G1250000 Malus domestica HOM05D006845 ORTHO05D009300 5.7e-166 588.2 409 67.5
arahy.Tifrunner.gnm1.ann1.61G52X Arachis hypogaea HOM05D006845 ORTHO05D009300 6.4e-165 584.7 407 67.1
Migut.H01945 Erythranthe guttata HOM05D006845 ORTHO05D009300 8.3e-165 584.3 404 65.8
Glyma.13G275900 Glycine max HOM05D006845 ORTHO05D009300 8.3e-165 584.3 413 67.3
arahy.Tifrunner.gnm1.ann1.ME6152 Arachis hypogaea HOM05D006845 ORTHO05D009300 3.2e-164 582.4 407 66.8
Sp6g15920 Schrenkiella parvula HOM05D006845 ORTHO05D009300 9.2e-164 580.9 414 66.4
Thhalv10013651m.g Eutrema salsugineum HOM05D006845 ORTHO05D009300 2.7e-163 579.3 414 65.9
CARHR266990 Cardamine hirsuta HOM05D006845 ORTHO05D009300 3.5e-163 578.9 414 66.2
Aa31LG3G10070 Aethionema arabicum HOM05D006845 ORTHO05D009300 7.8e-163 577.8 403 68.0
A10p11250 Brassica napus HOM05D006845 ORTHO05D009300 1.7e-162 576.6 414 66.2
C09p43870 Brassica napus HOM05D006845 ORTHO05D009300 1.7e-162 576.6 414 66.2
FAN21G2917 Fragaria x ananassa HOM05D006845 ORTHO05D009300 2.3e-162 576.2 426 65.3
Lsat_1_v5_gn_9_97520 Lactuca sativa HOM05D006845 ORTHO05D009300 3.0e-162 575.9 415 65.8
BcaC04g20411 Brassica carinata HOM05D006845 ORTHO05D009300 6.6e-162 574.7 414 66.2
Lj3g0006633 Lotus japonicus HOM05D006845 ORTHO05D009300 1.9e-161 573.2 412 67.0
BcaB08g35745 Brassica carinata HOM05D006845 ORTHO05D009300 7.3e-161 571.2 414 65.5
DCAR_017135 Daucus carota HOM05D006845 ORTHO05D009300 9.5e-161 570.9 412 65.3
Actinidia18770 Actinidia chinensis HOM05D006845 ORTHO05D009300 3.6e-160 568.9 388 67.8
THA.LOC104811867 Tarenaya hassleriana HOM05D006845 ORTHO05D009300 6.2e-160 568.2 414 65.5
Peaxi162Scf00000g00345 Petunia axillaris HOM05D006845 ORTHO05D009300 8.0e-160 567.8 406 68.5
Nitab4.5_0003378g0090 Nicotiana tabacum HOM05D006845 ORTHO05D009300 1.4e-159 567.0 404 68.3
TWI39G1089 Tripterygium wilfordii HOM05D006845 ORTHO05D009300 1.4e-159 567.0 412 65.5
VMungo1080G1688 Vigna mungo HOM05D006845 ORTHO05D009300 1.5e-158 563.5 413 65.1
Oeu051072.2 Olea europaea HOM05D006845 ORTHO05D009300 2.6e-158 562.8 438 62.1
Aqoxy1G02380 Aquilegia oxysepala HOM05D006845 ORTHO05D009300 7.5e-158 561.2 412 65.0
Duzib213G0603 Durio zibethinus HOM05D006845 ORTHO05D009300 2.0e-155 553.1 404 65.3
MD03G1229200 Malus domestica HOM05D006845 ORTHO05D009300 6.0e-155 551.6 410 64.6
Phvul.005G073100 Phaseolus vulgaris HOM05D006845 ORTHO05D009300 7.8e-155 551.2 413 63.9
CDE02G1035 Ceratophyllum demersum HOM05D006845 ORTHO05D009300 3.0e-154 549.3 410 64.1
ATR0737G060 Amborella trichopoda HOM05D006845 ORTHO05D009300 3.6e-152 542.3 414 61.6
Sabra16G0261500 Salix brachista HOM05D006845 ORTHO05D009300 4.7e-152 542.0 540 53.0
FAN16G0640 Fragaria x ananassa HOM05D006845 ORTHO05D009300 4.0e-151 538.9 418 63.9
FAN25G1923 Fragaria x ananassa HOM05D006845 ORTHO05D009300 5.2e-151 538.5 407 64.1
BolC9t57269H Brassica oleracea HOM05D006845 ORTHO05D009300 6.8e-151 538.1 429 61.1
SGA_v2.0_scaffold70G23678 Striga asiatica HOM05D006845 ORTHO05D009300 2.9e-149 532.7 411 61.8
Ca_03508_v3 Cicer arietinum L. HOM05D006845 ORTHO05D009300 1.6e-147 526.9 400 64.2
BraA10t43218Z Brassica rapa HOM05D006845 ORTHO05D009300 2.8e-144 516.2 459 56.9
Sc16g0007040 Simmondsia chinensis HOM05D006845 ORTHO05D009300 4.1e-140 502.3 285 80.0
Psat5g242160 Pisum sativum HOM05D006845 ORTHO05D009300 1.4e-135 487.3 393 60.3
HPP92_003615 Vanilla planifolia HOM05D006845 ORTHO05D009300 1.5e-134 483.8 410 56.1
Lj1C841T8 Lonicera japonica HOM05D006845 ORTHO05D009300 9.3e-132 474.6 374 62.8
Cpa.g.sc80.77 Carica papaya HOM05D006845 ORTHO05D009300 6.6e-130 468.4 391 60.1
Medtr2g079060 Medicago truncatula HOM05D006845 ORTHO05D009300 1.5e-129 467.2 403 58.6
ECA240G2176 Erigeron canadensis HOM05D006845 ORTHO05D009300 4.3e-129 465.7 288 72.6
Actinidia35244 Actinidia chinensis HOM05D006845 ORTHO05D009300 2.8e-128 463.0 397 57.4
TPR.G7949 Trifolium pratense HOM05D006845 ORTHO05D009300 3.1e-127 459.5 365 62.7
Haze_09439 Corylus avellana HOM05D006845 ORTHO05D009300 1.6e-115 420.6 390 56.7
BcaB07g33336 Brassica carinata HOM05D006845 ORTHO05D009300 9.7e-89 331.6 199 74.4
SEGI_13558 Sequoiadendron giganteum HOM05D006845 ORTHO05D009300 1.4e-82 311.2 346 42.8
Cc05_g11920 Coffea canephora HOM05D006845 ORTHO05D009300 2.0e-81 307.4 193 72.0
Cc05_g11930 Coffea canephora HOM05D006845 ORTHO05D009300 1.6e-75 287.7 214 65.4
Pp3c1_32740 Physcomitrium patens HOM05D006845 ORTHO05D009300 1.6e-70 271.2 381 38.1
AagrBONN_evm.TU.Sc2ySwM_344.572 Anthoceros agrestis HOM05D006845 ORTHO05D009300 3.5e-70 270.0 427 34.9
Mapoly0037s0133 Marchantia polymorpha HOM05D006845 ORTHO05D009300 2.8e-56 223.8 352 32.7
SMO143G0137 Selaginella moellendorffii HOM05D006845 ORTHO05D009300 4.4e-49 199.9 246 40.7
unitig_899.g15568 Utricularia gibba HOM05D006845 ORTHO05D009300 1.5e-44 184.9 106 76.4
Sabra11G0103000 Salix brachista HOM05D006845 ORTHO05D009300 4.7e-35 153.3 85 78.8
BcaB04g16942 Brassica carinata HOM05D006845 ORTHO05D009300 7.1e-31 139.4 144 54.2
Lsat_1_v5_gn_7_87221 Lactuca sativa HOM05D003066 ORTHO05D004162 1.3e-21 108.6 72 63.9
Lsat_1_v5_gn_4_31781 Lactuca sativa HOM05D006845 ORTHO05D014206 6.2e-19 99.8 70 58.6
Lsat_1_v5_gn_5_134240 Lactuca sativa HOM05D006845 ORTHO05D014206 6.2e-19 99.8 70 58.6
Lsat_1_v5_gn_7_62660 Lactuca sativa HOM05D006845 ORTHO05D014206 6.2e-19 99.8 70 58.6
Hma1.2p1_0554F.1_g177810 Hydrangea macrophylla HOM05D006845 ORTHO05D014206 1.3e-11 75.5 57 61.4
FAN12G2298 Fragaria x ananassa HOM05D006845 ORTHO05D014206 2.6e-09 67.8 44 68.2
FAN25G3098 Fragaria x ananassa HOM05D006845 ORTHO05D014206 1.7e-08 65.1 44 65.9
FAN05G4902 Fragaria x ananassa HOM05D006845 ORTHO05D014206 2.9e-08 64.3 45 62.2
MBI02_g32976_MAGBIO Magnolia biondii HOM05D000872 ORTHO05D014206 1.4e-07 62.0 87 41.4
FAN09G2373 Fragaria x ananassa HOM05D006845 ORTHO05D014206 7.9e-06 56.2 42 59.5


User provided reference genes

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