Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.06g183700 Amaranthus hybridus HOM05D000045 ORTHO05D010054 8.9e-37 156.4 76 100.0
Ah.07g198010 Amaranthus hybridus HOM05D000045 ORTHO05D010054 1.2e-28 129.4 72 87.5
AUR62033098 Chenopodium quinoa HOM05D009508 ORTHO05D000695 6.6e-08 60.5 85 37.6
EL10Ac5g11372 Beta vulgaris HOM05D000045 ORTHO05D000067 1.5e-07 59.3 62 43.5
AUR62030095 Chenopodium quinoa HOM05D009508 ORTHO05D000695 1.5e-07 59.3 85 36.5
AUR62037106 Chenopodium quinoa HOM05D009508 ORTHO05D000695 7.3e-07 57.0 85 36.5
EL10Ac2g02717 Beta vulgaris HOM05D000045 ORTHO05D000067 9.6e-07 56.6 62 41.9
EL10Ac3g06581 Beta vulgaris HOM05D000045 ORTHO05D000067 9.6e-07 56.6 62 41.9
EL10Ac6g13792 Beta vulgaris HOM05D000045 ORTHO05D000067 9.6e-07 56.6 62 41.9
EL10As3g23329 Beta vulgaris HOM05D000045 ORTHO05D000067 9.6e-07 56.6 62 41.9
SGA_v2.0_scaffold309G48184 Striga asiatica HOM05D014716 ORTHO05D010054 9.6e-07 56.6 73 41.1
SGA_v2.0_scaffold86G26862 Striga asiatica HOM05D000045 ORTHO05D010054 9.6e-07 56.6 65 44.6
EL10Ac2g03088 Beta vulgaris HOM05D000045 ORTHO05D010054 1.2e-06 56.2 62 41.9
EL10Ac5g11586 Beta vulgaris HOM05D000045 ORTHO05D000067 1.2e-06 56.2 62 41.9
EL10Ac6g14806 Beta vulgaris HOM05D000045 ORTHO05D000067 1.2e-06 56.2 62 41.9
Prupe.3G021400 Prunus persica HOM05D000045 ORTHO05D000611 1.6e-06 55.8 51 49.0
HanXRQChr08g0223531 Helianthus annuus HOM05D000045 ORTHO05D000067 2.1e-06 55.5 57 45.6
EL10Ac5g12499 Beta vulgaris HOM05D000045 ORTHO05D000067 4.7e-06 54.3 57 42.1
EL10Ac8g19696 Beta vulgaris HOM05D000045 ORTHO05D000067 4.7e-06 54.3 57 42.1
SGA_v2.0_scaffold668G53413 Striga asiatica HOM05D009041 ORTHO05D010054 4.7e-06 54.3 54 46.3
THA.LOC104822319 Tarenaya hassleriana HOM05D000045 ORTHO05D000067 4.7e-06 54.3 58 39.7
Prupe.1G074100 Prunus persica HOM05D014194 ORTHO05D011270 6.2e-06 53.9 74 35.1
MBI06_g15025_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D000611 8.1e-06 53.5 62 40.3
Os07g0615900 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000067 8.1e-06 53.5 61 45.9


User provided reference genes

Program Settings