Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.06g183090 Amaranthus hybridus HOM05D007317 ORTHO05D009299 7.9e-155 550.4 286 100.0
EL10Ac4g07985 Beta vulgaris HOM05D007317 ORTHO05D009299 3.0e-130 468.8 286 85.0
AUR62029234 Chenopodium quinoa HOM05D007317 ORTHO05D009299 3.2e-119 432.2 277 78.3
AUR62015637 Chenopodium quinoa HOM05D007317 ORTHO05D009299 5.4e-119 431.4 285 77.2
CSS0029394 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 4.9e-104 381.7 283 67.8
Sc03g0009140 Simmondsia chinensis HOM05D007317 ORTHO05D009299 8.3e-104 380.9 283 70.3
CSS0009056 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 4.1e-103 378.6 283 67.8
Thecc.07G054800 Theobroma cacao HOM05D007317 ORTHO05D009299 9.2e-103 377.5 281 68.3
Lj1C863T3 Lonicera japonica HOM05D007317 ORTHO05D009299 5.1e-101 371.7 277 67.5
Potri.011G132500 Populus trichocarpa HOM05D007317 ORTHO05D009299 1.1e-100 370.5 279 68.8
CiPaw.11G183200 Carya illinoinensis HOM05D007317 ORTHO05D009299 1.9e-100 369.8 283 68.6
Manes.03G122200 Manihot esculenta HOM05D007317 ORTHO05D009299 2.5e-100 369.4 282 67.0
TAR627G0483 Trochodendron aralioides HOM05D007317 ORTHO05D009299 3.3e-100 369.0 283 66.4
TPR.G36790 Trifolium pratense HOM05D007317 ORTHO05D009299 4.3e-100 368.6 283 66.8
Actinidia09959 Actinidia chinensis HOM05D007317 ORTHO05D009299 5.6e-100 368.2 283 66.8
Duzib213G1071 Durio zibethinus HOM05D007317 ORTHO05D009299 9.5e-100 367.5 281 66.9
QL08p013454 Quercus lobata HOM05D007317 ORTHO05D009299 1.6e-99 366.7 282 66.3
QL08p013772 Quercus lobata HOM05D007317 ORTHO05D009299 1.6e-99 366.7 282 66.3
Sabra11G0119300 Salix brachista HOM05D007317 ORTHO05D009299 1.6e-99 366.7 279 67.7
Ca_01757_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 2.1e-99 366.3 281 64.8
Ca_01763_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 2.1e-99 366.3 281 64.8
Cfa020433 Carpinus fangiana HOM05D007317 ORTHO05D009299 3.6e-99 365.5 284 66.5
SalBow7G0069 Salvia bowleyana HOM05D007317 ORTHO05D009299 3.6e-99 365.5 283 64.7
TAR627G0019 Trochodendron aralioides HOM05D007317 ORTHO05D009299 3.6e-99 365.5 281 66.2
Haze_09595 Corylus avellana HOM05D007317 ORTHO05D009299 3.1e-98 362.5 284 66.2
Medtr2g082660 Medicago truncatula HOM05D007317 ORTHO05D009299 3.1e-98 362.5 281 66.9
Glyma.12G214800 Glycine max HOM05D007317 ORTHO05D009299 1.5e-97 360.1 281 66.2
Glyma.13G286800 Glycine max HOM05D007317 ORTHO05D009299 2.0e-97 359.8 281 66.2
VMungo1080G0023 Vigna mungo HOM05D007317 ORTHO05D009299 2.6e-97 359.4 281 65.5
Lalb_Chr22g0357071 Lupinus albus HOM05D007317 ORTHO05D009299 3.4e-97 359.0 281 64.1
Dinv22311 Davidia involucrata HOM05D007317 ORTHO05D009299 4.4e-97 358.6 274 66.4
Lj3g0025188 Lotus japonicus HOM05D007317 ORTHO05D009299 4.4e-97 358.6 281 66.2
Phvul.005G091100 Phaseolus vulgaris HOM05D007317 ORTHO05D009299 5.8e-97 358.2 281 65.8
Atru.chr2.3195 Acer truncatum HOM05D007317 ORTHO05D009299 9.9e-97 357.5 281 64.4
Gohir.A01G074100 Gossypium hirsutum HOM05D007317 ORTHO05D009299 4.9e-96 355.1 272 65.4
Atru.chr2.3185 Acer truncatum HOM05D007317 ORTHO05D009299 1.1e-95 354.0 280 64.3
Aqoxy4G02123 Aquilegia oxysepala HOM05D007317 ORTHO05D009299 1.1e-95 354.0 280 63.9
Nn1g03706 Nelumbo nucifera HOM05D007317 ORTHO05D009299 1.1e-95 354.0 282 65.2
Gorai.002G082000 Gossypium raimondii HOM05D007317 ORTHO05D009299 5.4e-95 351.7 272 64.7
Gohir.D01G060600 Gossypium hirsutum HOM05D007317 ORTHO05D009299 1.2e-94 350.5 272 64.3
PGR083G0561 Punica granatum HOM05D007317 ORTHO05D009299 1.6e-94 350.1 282 64.2
ClCG10G005750 Citrullus lanatus HOM05D007317 ORTHO05D009299 2.7e-94 349.4 283 63.6
Ciclev10008788m.g Citrus clementina HOM05D007317 ORTHO05D009299 2.7e-94 349.4 279 63.8
MELO3C025426.2 Cucumis melo HOM05D007317 ORTHO05D009299 1.0e-93 347.4 283 65.0
Sopen12g001230 Solanum pennellii HOM05D007317 ORTHO05D009299 1.0e-93 347.4 283 65.0
Hma1.2p1_2644F.1_g325960 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 1.3e-93 347.1 271 64.2
Psat5g249840 Pisum sativum HOM05D007317 ORTHO05D009299 2.3e-93 346.3 284 62.3
Solyc12g005240.1 Solanum lycopersicum HOM05D007317 ORTHO05D009299 3.0e-93 345.9 283 64.3
Prupe.4G201600 Prunus persica HOM05D007317 ORTHO05D009299 3.9e-93 345.5 276 63.0
RcHm_v2.0_Chr5g0037211 Rosa chinensis HOM05D007317 ORTHO05D009299 3.9e-93 345.5 276 63.8
TWI38G0523 Tripterygium wilfordii HOM05D007317 ORTHO05D009299 5.1e-93 345.1 276 64.9
CsaV3_3G005440 Cucumis sativus L. HOM05D007317 ORTHO05D009299 6.6e-93 344.7 283 64.7
Peaxi162Scf01097g00014 Petunia axillaris HOM05D007317 ORTHO05D009299 1.5e-92 343.6 282 62.4
CANSAT11G2557 Cannabis sativa HOM05D007317 ORTHO05D009299 3.3e-92 342.4 281 62.6
Nitab4.5_0000092g0060 Nicotiana tabacum HOM05D007317 ORTHO05D009299 7.3e-92 341.3 283 61.8
CAN.G262.21 Capsicum annuum HOM05D007317 ORTHO05D009299 9.6e-92 340.9 273 63.4
Migut.H01861 Erythranthe guttata HOM05D007317 ORTHO05D009299 1.2e-91 340.5 285 60.7
Nitab4.5_0000749g0020 Nicotiana tabacum HOM05D007317 ORTHO05D009299 2.1e-91 339.7 283 61.8
Lsat_1_v5_gn_0_6961 Lactuca sativa HOM05D007317 ORTHO05D001968 2.8e-91 339.3 273 64.8
PGSC0003DMG400021808 Solanum tuberosum HOM05D007317 ORTHO05D009299 2.8e-91 339.3 283 62.9
Eucgr.F00996 Eucalyptus grandis HOM05D007317 ORTHO05D009299 3.6e-91 339.0 281 63.3
FvH4_3g21740 Fragaria vesca HOM05D007317 ORTHO05D009299 1.1e-90 337.4 271 62.7
GSVIVG01014590001 Vitis vinifera HOM05D007317 ORTHO05D009299 3.4e-89 332.4 281 61.2
HanXRQChr03g0077301 Helianthus annuus HOM05D007317 ORTHO05D009299 4.4e-89 332.0 290 61.0
MBI02_g29710_MAGBIO Magnolia biondii HOM05D007317 ORTHO05D009299 9.9e-89 330.9 276 62.3
PSO541G0431 Papaver somniferum HOM05D007317 ORTHO05D009299 1.2e-86 323.9 286 55.9
MD11G1227700 Malus domestica HOM05D007317 ORTHO05D009299 3.5e-86 322.4 279 59.9
AL3G34590 Arabidopsis lyrata HOM05D007317 ORTHO05D009299 7.3e-84 314.7 273 60.1
Sp3g18720 Schrenkiella parvula HOM05D007317 ORTHO05D009299 7.3e-84 314.7 274 60.6
PSO675G5311 Papaver somniferum HOM05D007317 ORTHO05D009299 9.6e-84 314.3 275 55.6
AT3G20680 Arabidopsis thaliana HOM05D007317 ORTHO05D009299 1.3e-83 313.9 284 59.2
A01p34120 Brassica napus HOM05D007317 ORTHO05D009299 2.1e-83 313.2 283 60.4
BraA01t03516Z Brassica rapa HOM05D007317 ORTHO05D009299 2.8e-83 312.8 283 60.1
Thhalv10021080m.g Eutrema salsugineum HOM05D007317 ORTHO05D009299 2.4e-82 309.7 274 59.5
BcaC09g49009 Brassica carinata HOM05D007317 ORTHO05D009299 3.1e-82 309.3 284 59.9
CARHR096490 Cardamine hirsuta HOM05D007317 ORTHO05D009299 1.5e-81 307.0 279 60.6
C01p43540 Brassica napus HOM05D007317 ORTHO05D009299 2.0e-81 306.6 284 58.5
BolC1t04315H Brassica oleracea HOM05D007317 ORTHO05D009299 2.0e-81 306.6 284 58.5
Hma1.2p1_2644F.1_g325950 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 1.7e-80 303.5 271 57.6
Sed0024877 Sechium edule HOM05D007317 ORTHO05D009299 4.9e-80 302.0 280 57.9
BcaB04g20638 Brassica carinata HOM05D007317 ORTHO05D009299 1.1e-79 300.8 283 58.7
Aa31LG8G7460 Aethionema arabicum HOM05D007317 ORTHO05D009299 2.4e-79 299.7 288 56.9
unitig_578.g16764 Utricularia gibba HOM05D007317 ORTHO05D009299 1.2e-78 297.4 284 53.9
COL.COLO4_09559 Corchorus olitorius HOM05D007317 ORTHO05D009299 3.5e-78 295.8 281 57.7
THA.LOC104825404 Tarenaya hassleriana HOM05D007317 ORTHO05D009299 1.3e-77 293.9 279 55.9
Carub.0003s2066 Capsella rubella HOM05D007317 ORTHO05D009299 7.4e-76 288.1 274 57.7
ATR0733G181 Amborella trichopoda HOM05D007317 ORTHO05D009299 8.1e-75 284.6 273 53.8
SGA_v2.0_scaffold320G48570 Striga asiatica HOM05D007317 ORTHO05D009299 3.4e-73 279.3 275 56.0
Zm00001eb291900 Zea mays HOM05D007317 ORTHO05D009299 6.5e-64 248.4 284 48.2
Cc05_g13190 Coffea canephora HOM05D007317 ORTHO05D009299 2.5e-63 246.5 206 60.2
Os05g0500400 Oryza sativa ssp. japonica HOM05D007317 ORTHO05D009299 7.9e-62 241.5 292 49.3
Lalb_Chr14g0366071 Lupinus albus HOM05D007317 ORTHO05D009299 1.7e-56 223.8 183 59.0
SEGI_21971 Sequoiadendron giganteum HOM05D007317 ORTHO05D009299 7.2e-47 191.8 271 38.4
FAN21G2436 Fragaria x ananassa HOM05D007317 ORTHO05D009299 4.6e-46 189.1 134 68.7
Cpa.g.sc97.77 Carica papaya HOM05D007317 ORTHO05D009299 2.6e-44 183.3 162 58.0
PGSC0003DMG400016049 Solanum tuberosum HOM05D007317 ORTHO05D009299 5.3e-42 175.6 123 69.1
Pp3c9_12310 Physcomitrium patens HOM05D007317 ORTHO05D009299 4.7e-30 136.0 267 33.3
Mapoly0015s0049 Marchantia polymorpha HOM05D007317 ORTHO05D009299 1.0e-29 134.8 278 32.4
BolC3t18840H Brassica oleracea HOM05D007317 ORTHO05D009299 4.8e-27 125.9 256 38.7
Dinv32111 Davidia involucrata HOM05D007317 ORTHO05D009299 1.1e-26 124.8 114 59.6
BcaC09g49010 Brassica carinata HOM05D007317 ORTHO05D009299 2.0e-25 120.6 134 47.0
BcaC01g02387 Brassica carinata HOM05D007317 ORTHO05D009299 1.7e-24 117.5 192 43.2
MD03G1212500 Malus domestica HOM05D007317 ORTHO05D009299 1.6e-22 110.9 114 50.9
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 2.2e-19 100.5 259 27.8
BcaB02g11442 Brassica carinata HOM05D007317 ORTHO05D009299 1.1e-10 71.6 107 37.4
Cre08.g369000 Chlamydomonas reinhardtii HOM05D007317 ORTHO05D009299 4.3e-07 59.7 302 23.8


User provided reference genes

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